Factsheet for Os03t0167800-02

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G282200.1	Wheat	cytosol	79.45	83.45
TraesCS4A01G020200.1	Wheat	cytosol	80.59	82.09
TraesCS4B01G283400.1	Wheat	cytosol	79.91	81.4
EER95442	Sorghum	mitochondrion	80.59	80.59
TraesCS4B01G283500.1	Wheat	cytosol	79.22	80.51
Zm00001d027827_P001	Maize	cytosol, mitochondrion, nucleus	80.59	80.41
HORVU4Hr1G074720.7	Barley	plasma membrane	80.59	80.41
Os10t0409900-01	Rice	plastid	81.05	80.32
TraesCS3D01G540000.1	Wheat	cytosol	77.85	79.86
TraesCS3B01G611700.1	Wheat	cytosol	77.63	79.63
TraesCS3A01G534600.1	Wheat	cytosol	76.94	78.19
GSMUA_Achr7P27010_001	Banana	cytosol	70.09	73.8
GSMUA_Achr3P29560_001	Banana	cytosol	67.81	72.26
HORVU3Hr1G116690.2	Barley	mitochondrion	79.0	71.05
VIT_06s0004g00860.t01	Wine grape	cytosol	70.32	70.48
CDY08233	Canola	mitochondrion	69.63	70.11
Bra011908.1-P	Field mustard	mitochondrion	69.18	69.66
CDY26117	Canola	cytosol	69.18	69.66
Solyc01g005970.2.1	Tomato	cytosol	69.41	69.57
PGSC0003DMT400081852	Potato	cytosol	69.41	69.57
CDY02451	Canola	cytosol	68.72	69.2
CDY10574	Canola	cytosol	68.72	69.2
AT1G55270.1	Thale cress	mitochondrion	68.49	69.12
PGSC0003DMT400034149	Potato	cytosol	68.95	69.11
Bra030872.1-P	Field mustard	cytosol	68.49	68.97
Solyc01g022740.2.1	Tomato	cytosol	68.26	68.42
KRH42810	Soybean	cytosol	68.04	68.19
KRH58897	Soybean	cytosol	68.04	68.19
CDY24045	Canola	mitochondrion	65.75	66.21
Bra037989.1-P	Field mustard	cytosol, plastid	65.07	65.52
CDY33062	Canola	mitochondrion, plastid	65.07	65.52
KRH11716	Soybean	cytosol, golgi, plastid	50.0	58.87
KRH36711	Soybean	cytosol	47.95	52.11
Os02t0202900-00	Rice	cytosol	49.32	49.54
GSMUA_Achr4P03630_001	Banana	plasma membrane	62.1	32.04
Os07t0153400-01	Rice	mitochondrion	24.43	26.35
Os02t0114600-02	Rice	cytosol	21.46	26.11
Os06t0655500-01	Rice	cytosol	21.69	24.74
Os04t0380300-01	Rice	plastid	20.78	24.27
Os02t0504900-01	Rice	cytosol	21.23	24.16
Os02t0574900-01	Rice	cytosol	23.74	22.61
Os10t0363600-01	Rice	cytosol, plastid	24.43	22.53
Os10t0388200-01	Rice	cytosol	17.81	22.48
Os03t0171600-01	Rice	cytosol	20.32	20.65
Os02t0748300-01	Rice	cytosol	18.72	19.25
Os04t0619300-01	Rice	cytosol, extracellular	19.63	18.07
Os11t0602800-01	Rice	nucleus	17.58	17.82

Protein Annotations

Gene3D:2.120.10.80	EntrezGene:4331748	MapMan:9.2.1.1.3	ProteinID:ABF94176.1	EMBL:AK071501	EMBL:AK121310
ProteinID:BAF10999.1	ProteinID:BAS82494.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	GO:GO:0031463	InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
EnsemblPlantsGene:Os03g0167800	EnsemblPlants:Os03t0167800-02	PFAM:PF00646	PFAM:PF01344	PANTHER:PTHR24412	PANTHER:PTHR24412:SF234
UniProt:Q10R89	SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI0000DB44D2
RefSeq:XP_015633278.1	SEG:seg	:	:	:	:

Description

F-box protein 129Kelch-type beta propeller domain containing protein. (Os03t0167800-01);Kelch-type beta propeller domain containing protein. (Os03t0167800-02)

Coordinates

chr3:+:3664712..3669746

Molecular Weight (calculated)

50029.7 Da

IEP (calculated)

10.219

GRAVY (calculated)

-0.275

Length

438 amino acids

Sequence
(BLAST)

001: MDAAAGGAPP RPAAGIRVRV PLVESVSCYC RVDGGLKTVV SARKFVPGAK LCMQPDIKPN KRKSRSSHKE RCRTQAPLLP GLPDDLAITC LMRVPRLEHT
101: NLRLVCKRWN RLLSGNYYYS LRKKLGMAEE WVFVFKRDRD RKISWHAFDP VHQVWKSLPP VPAEYSEAVG FGCAVLSGCY LYLFGGKDPV RGSMRRVVFY
201: NARINKWLRA PDMLQKRHCF GSCVINNRLY VAGGECEGIQ RTLRSAEFYD PNRNRWSYIS EMSTGMVPFI GVVYDGKWFL KGLDSHRQVV SEVYMPTSNV
301: WSVTADEMVT GWRNPSICFN GRLYSAECRD GCKLRVYDRD TRSWTRFMDS RRHLGNSRAF EAAALVSLNG KICIIRNNMS ITLVDVSNTP TVIEINNAHM
401: WDVFARKGQH RSFIANLWFT IAGRNFKTHI IHCQVLQV

Best Arabidopsis Sequence Match ( AT1G55270.1 )
(BLAST)

001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA

Arabidopsis Description

F-box/kelch-repeat protein At1g55270 [Source:UniProtKB/Swiss-Prot;Acc:Q93W93]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.