Factsheet for Os02t0574900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
plasma membrane 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G227500.1	Wheat	cytosol, peroxisome, plastid	81.96	81.96
HORVU6Hr1G052010.1	Barley	cytosol	80.22	80.22
EES05304	Sorghum	cytosol, peroxisome, plastid	78.48	78.65
Zm00001d050862_P001	Maize	cytosol, peroxisome, plastid	76.3	76.97
GSMUA_Achr6P04050_001	Banana	cytosol	60.87	61.54
VIT_18s0001g04730.t01	Wine grape	cytosol, plastid	60.22	58.07
Solyc01g104980.2.1	Tomato	cytosol, plastid	58.04	56.21
VIT_12s0055g00910.t01	Wine grape	cytosol	58.48	56.16
KRH58301	Soybean	cytosol	58.26	55.72
PGSC0003DMT400032733	Potato	cytosol, plastid	57.39	55.58
KRH42190	Soybean	cytosol, plastid	57.83	55.3
KRH53131	Soybean	cytosol	55.0	53.15
AT1G22040.1	Thale cress	plastid	54.78	53.05
KRH18847	Soybean	cytosol	54.78	53.05
CDY00415	Canola	mitochondrion	24.57	52.8
KRH72270	Soybean	cytosol	15.0	52.67
KRH16647	Soybean	cytosol, plastid	54.57	52.62
KRH62415	Soybean	cytosol	31.3	52.17
GSMUA_Achr10P...	Banana	cytosol	58.7	51.92
Os10t0363600-01	Rice	cytosol, plastid	53.04	51.37
CDY01300	Canola	cytosol	24.57	50.45
CDY01301	Canola	cytosol	16.74	49.04
Bra012304.1-P	Field mustard	cytosol	49.57	48.82
CDY04697	Canola	cytosol	23.48	48.43
CDY30645	Canola	nucleus	23.48	48.43
Bra031360.1-P	Field mustard	plastid	23.91	45.08
KRH55297	Soybean	cytosol	25.65	40.27
Os06t0655500-01	Rice	cytosol	21.3	25.52
Os07t0153400-01	Rice	mitochondrion	22.39	25.37
Os10t0388200-01	Rice	cytosol	18.91	25.07
Os02t0114600-02	Rice	cytosol	18.91	24.17
Os04t0380300-01	Rice	plastid	19.57	24.0
Os02t0202900-00	Rice	cytosol	22.61	23.85
Os03t0167800-02	Rice	cytosol	22.61	23.74
Os02t0504900-01	Rice	cytosol	19.78	23.64
Os10t0409900-01	Rice	plastid	22.61	23.53
Os02t0748300-01	Rice	cytosol	19.13	20.66
Os03t0171600-01	Rice	cytosol	19.13	20.42
Os11t0602800-01	Rice	nucleus	18.7	19.91
Os04t0619300-01	Rice	cytosol, extracellular	19.13	18.49

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EntrezGene:4329747	ProteinID:BAD33349.1	ProteinID:BAF09123.1	ProteinID:BAS79372.1
ProteinID:EAZ23535.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	EnsemblPlantsGene:Os02g0574900	EnsemblPlants:Os02t0574900-01
PFAM:PF00646	PFAM:PF01344	PFscan:PS50181	PANTHER:PTHR24414	PANTHER:PTHR24414:SF45	UniProt:Q69S84
SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI000035AE87	RefSeq:XP_015627413.1
SEG:seg	:	:	:	:	:

Description

F-box protein 98Kelch-type beta propeller domain containing protein. (Os02t0574900-01)

Coordinates

chr2:+:22060846..22063367

Molecular Weight (calculated)

51552.8 Da

IEP (calculated)

6.524

GRAVY (calculated)

-0.144

Length

460 amino acids

Sequence
(BLAST)

001: MGSVVSSANI NARSMDRHEK SGFGSNKRVK ISTYECDSFQ RIIPTLPDEL SFQILARLPR LYYLKLKLVS QAWKAAITSS ELSQLRRELG LTEEWLYVLT
101: KLEPNKLDCY ALDPLFRKWQ RLPPMPSFVS EEESTGRTQS SWFQTWNVVG SSIRIADFIK GWFRRRYGLD QMPFCGCSVG VADGCLYVFG GFSRAVALNC
201: VFRYNPCLNV WQEVSPMISG RAFSKAALLQ SKLYVVGGVS RGRNGLLPLR SGEVFDPKTG IWSELPEMPF MKAQVLPTAF LADVLKPIAT GMASYKGKLY
301: VPQSLYSWPF FFDIGGEIYD PELNSWETMA DGLGDGWPAR QAGTKLGIVV NEELYTLEPS SSLDSGQIKR YDSEQDTWKT IVPQVPVHDF TDAEAPFLLA
401: GLHGKVHVIT KEANNNLQVM QAVLQNNIEN SPSEENIIWN ILASKNFGSA ELVSCQVLDV

Best Arabidopsis Sequence Match ( AT1G22040.1 )
(BLAST)

001: MGSVMSLSCS KRKATSQDVE CSSESRKRRK ISSENDEEEC CRLIPSLPDE LSIQILARLP RICYSSVRLV SRRWRSAVST SEVYSLRKEL GRTEEWLYVL
101: TKGHEDKLLW YALDPVSTKW QRLPPMPVVV YEEESRKSLS GLWNMITPSF NVGAIVRSFL GRRDSSEQMP FCGCAIGAVD GGLYVIGGLS RSKTVSCVWR
201: FDPILNSWSE VSSMLASRAY SKTGVLNKKL YVVGGVDRGR GGLSPLQSAE VYDPSTDAWS EVPSMPFSKA QVLPNAFLAD LLKPIATGMT CYNGRLCVPQ
301: SLYSWPFFVD VGGEVYDPET NLWVEMPSGM GEGWPARQAG TKLSVVVDGE LYAFDPSSSM ENGKIKVYDQ KEDTWKVVIG EVPVYDLTDS ESPYLLAGFH
401: GKLHFITRDP NHNVTVLRAD VPNIPVSSSS SSSSSVSIPH LKTNAPNKSD TVTWKLIATK DFGAAELVSC QVIDI

Arabidopsis Description

F-box/kelch-repeat protein At1g22040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM55]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.