Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04697 | Canola | cytosol | 39.58 | 84.3 |
| CDY30645 | Canola | nucleus | 39.37 | 83.86 |
| Bra031360.1-P | Field mustard | plastid | 40.84 | 79.51 |
| CDY00415 | Canola | mitochondrion | 34.53 | 76.64 |
| CDY01300 | Canola | cytosol | 35.79 | 75.89 |
| Bra012304.1-P | Field mustard | cytosol | 73.05 | 74.3 |
| CDY01301 | Canola | cytosol | 22.32 | 67.52 |
| VIT_18s0001g04730.t01 | Wine grape | cytosol, plastid | 67.79 | 67.51 |
| KRH62415 | Soybean | cytosol | 38.53 | 66.3 |
| KRH53131 | Soybean | cytosol | 64.0 | 63.87 |
| KRH18847 | Soybean | cytosol | 61.89 | 61.89 |
| KRH16647 | Soybean | cytosol, plastid | 61.47 | 61.22 |
| GSMUA_Achr6P04050_001 | Banana | cytosol | 58.32 | 60.88 |
| EES05304 | Sorghum | cytosol, peroxisome, plastid | 53.26 | 55.12 |
| Os02t0574900-01 | Rice | cytosol | 53.05 | 54.78 |
| TraesCS6B01G227500.1 | Wheat | cytosol, peroxisome, plastid | 53.05 | 54.78 |
| Zm00001d050862_P001 | Maize | cytosol, peroxisome, plastid | 52.21 | 54.39 |
| HORVU6Hr1G052010.1 | Barley | cytosol | 52.21 | 53.91 |
| Os10t0363600-01 | Rice | cytosol, plastid | 52.42 | 52.42 |
| KXG24326 | Sorghum | cytosol | 51.58 | 52.35 |
| TraesCS7A01G020100.1 | Wheat | cytosol, plastid | 49.26 | 51.32 |
| TraesCS7D01G016400.1 | Wheat | cytosol, plastid | 48.63 | 50.66 |
| TraesCS4A01G472100.1 | Wheat | cytosol | 48.63 | 50.44 |
| HORVU7Hr1G002140.2 | Barley | mitochondrion | 50.32 | 50.1 |
| GSMUA_Achr10P... | Banana | cytosol | 54.11 | 49.42 |
| Zm00001d049632_P001 | Maize | cytosol | 49.26 | 48.85 |
| KRH55297 | Soybean | cytosol | 29.26 | 47.44 |
| GSMUA_Achr2P22090_001 | Banana | cytosol | 34.11 | 42.97 |
| AT1G67480.1 | Thale cress | cytosol, mitochondrion | 20.84 | 26.33 |
| AT1G55270.1 | Thale cress | mitochondrion | 23.79 | 26.04 |
| AT1G16250.2 | Thale cress | cytosol | 20.42 | 25.33 |
| AT2G24540.1 | Thale cress | cytosol | 19.79 | 25.27 |
| AT3G63220.2 | Thale cress | cytosol | 18.53 | 25.0 |
| AT1G30090.1 | Thale cress | mitochondrion, plastid | 20.63 | 24.62 |
| AT3G61350.2 | Thale cress | cytosol | 18.32 | 24.3 |
| AT1G27420.1 | Thale cress | cytosol, plastid | 17.47 | 23.99 |
| AT1G14330.1 | Thale cress | nucleus | 20.0 | 21.54 |
| AT5G60570.2 | Thale cress | cytosol | 17.47 | 21.12 |
| AT1G26930.1 | Thale cress | cytosol | 18.53 | 20.9 |
| AT3G27150.1 | Thale cress | cytosol | 17.68 | 19.91 |
| AT2G02870.1 | Thale cress | nucleus | 19.16 | 19.49 |
| AT1G74510.2 | Thale cress | cytosol | 17.89 | 18.85 |
| AT5G40680.1 | Thale cress | mitochondrion | 15.16 | 17.35 |
Protein Annotations
| Gene3D:1.20.1280.50 | Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:838809 | UniProt:A0A178W3V1 | ProteinID:AAF86548.1 |
| ProteinID:AEE30188.1 | ArrayExpress:AT1G22040 | EnsemblPlantsGene:AT1G22040 | RefSeq:AT1G22040 | TAIR:AT1G22040 | RefSeq:AT1G22040-TAIR-G |
| EnsemblPlants:AT1G22040.1 | TAIR:AT1G22040.1 | Unigene:At.41625 | EMBL:BT023422 | EMBL:BT025319 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001810 | InterPro:IPR015915 |
| InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | RefSeq:NP_173623.1 | ProteinID:OAP12816.1 | PFAM:PF01344 | PFAM:PF12937 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50181 | PANTHER:PTHR24414 | PANTHER:PTHR24414:SF39 | UniProt:Q9LM55 | SMART:SM00256 |
| SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI000009F122 | SEG:seg | : |
Description
F-box/kelch-repeat protein At1g22040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM55]
Coordinates
chr1:+:7767924..7770216
Molecular Weight (calculated)
52536.6 Da
IEP (calculated)
6.658
GRAVY (calculated)
-0.205
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSVMSLSCS KRKATSQDVE CSSESRKRRK ISSENDEEEC CRLIPSLPDE LSIQILARLP RICYSSVRLV SRRWRSAVST SEVYSLRKEL GRTEEWLYVL
101: TKGHEDKLLW YALDPVSTKW QRLPPMPVVV YEEESRKSLS GLWNMITPSF NVGAIVRSFL GRRDSSEQMP FCGCAIGAVD GGLYVIGGLS RSKTVSCVWR
201: FDPILNSWSE VSSMLASRAY SKTGVLNKKL YVVGGVDRGR GGLSPLQSAE VYDPSTDAWS EVPSMPFSKA QVLPNAFLAD LLKPIATGMT CYNGRLCVPQ
301: SLYSWPFFVD VGGEVYDPET NLWVEMPSGM GEGWPARQAG TKLSVVVDGE LYAFDPSSSM ENGKIKVYDQ KEDTWKVVIG EVPVYDLTDS ESPYLLAGFH
401: GKLHFITRDP NHNVTVLRAD VPNIPVSSSS SSSSSVSIPH LKTNAPNKSD TVTWKLIATK DFGAAELVSC QVIDI
101: TKGHEDKLLW YALDPVSTKW QRLPPMPVVV YEEESRKSLS GLWNMITPSF NVGAIVRSFL GRRDSSEQMP FCGCAIGAVD GGLYVIGGLS RSKTVSCVWR
201: FDPILNSWSE VSSMLASRAY SKTGVLNKKL YVVGGVDRGR GGLSPLQSAE VYDPSTDAWS EVPSMPFSKA QVLPNAFLAD LLKPIATGMT CYNGRLCVPQ
301: SLYSWPFFVD VGGEVYDPET NLWVEMPSGM GEGWPARQAG TKLSVVVDGE LYAFDPSSSM ENGKIKVYDQ KEDTWKVVIG EVPVYDLTDS ESPYLLAGFH
401: GKLHFITRDP NHNVTVLRAD VPNIPVSSSS SSSSSVSIPH LKTNAPNKSD TVTWKLIATK DFGAAELVSC QVIDI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.