CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16647	Soybean	cytosol, plastid	92.63	92.24
KRH55297	Soybean	cytosol	50.53	81.91
KRH53131	Soybean	cytosol	78.11	77.94
KRH62415	Soybean	cytosol	43.37	74.64
VIT_18s0001g04730.t01	Wine grape	cytosol, plastid	72.0	71.7
AT1G22040.1	Thale cress	plastid	61.89	61.89
KRH72270	Soybean	cytosol	17.05	61.83
CDY00415	Canola	mitochondrion	27.16	60.28
KRH42190	Soybean	cytosol, plastid	60.63	59.88
GSMUA_Achr6P04050_001	Banana	cytosol	57.05	59.56
KRH58301	Soybean	cytosol	59.79	59.04
CDY01300	Canola	cytosol	27.79	58.93
TraesCS7D01G016400.1	Wheat	cytosol, plastid	55.16	57.46
Os10t0363600-01	Rice	cytosol, plastid	57.26	57.26
TraesCS4A01G472100.1	Wheat	cytosol	55.16	57.21
TraesCS7A01G020100.1	Wheat	cytosol, plastid	54.53	56.8
KXG24326	Sorghum	cytosol	55.79	56.62
TraesCS6B01G227500.1	Wheat	cytosol, peroxisome, plastid	54.32	56.09
HORVU6Hr1G052010.1	Barley	cytosol	53.26	55.0
EES05304	Sorghum	cytosol, peroxisome, plastid	53.05	54.9
Bra012304.1-P	Field mustard	cytosol	53.89	54.82
Os02t0574900-01	Rice	cytosol	53.05	54.78
HORVU7Hr1G002140.2	Barley	mitochondrion	54.95	54.72
CDY30645	Canola	nucleus	25.68	54.71
Zm00001d050862_P001	Maize	cytosol, peroxisome, plastid	52.21	54.39
CDY04697	Canola	cytosol	25.05	53.36
Zm00001d049632_P001	Maize	cytosol	52.0	51.57
Bra031360.1-P	Field mustard	plastid	26.11	50.82
GSMUA_Achr10P...	Banana	cytosol	54.53	49.81
CDY01301	Canola	cytosol	15.58	47.13
GSMUA_Achr2P22090_001	Banana	cytosol	32.63	41.11
KRH11716	Soybean	cytosol, golgi, plastid	22.74	29.03
KRH56558	Soybean	cytosol	25.68	28.5
KRG93237	Soybean	cytosol	25.68	28.5
KRH67237	Soybean	cytosol	20.42	28.12
KRG95556	Soybean	cytosol	20.21	27.83
KRG93186	Soybean	cytosol	23.16	27.64
KRH58897	Soybean	cytosol	24.84	27.0
KRH42810	Soybean	cytosol	24.84	27.0
KRH32035	Soybean	cytosol	19.37	26.74
KRH71403	Soybean	cytosol	19.16	26.45
KRH48153	Soybean	cytosol	19.37	25.41
KRH36711	Soybean	cytosol	21.47	25.31
KRG97442	Soybean	cytosol, nucleus, peroxisome	19.58	25.14
KRH42654	Soybean	cytosol	20.21	24.74
KRH31463	Soybean	cytosol	20.0	24.68
KRH48156	Soybean	cytosol	18.53	24.31
KRH21075	Soybean	mitochondrion	20.63	24.2
KRH11179	Soybean	mitochondrion, plastid	20.63	24.2
KRH61941	Soybean	plastid	17.68	23.93
KRH48154	Soybean	cytosol	18.53	23.91
KRH26429	Soybean	cytosol	18.32	23.9
KRH57678	Soybean	cytosol	19.16	23.1
KRH22905	Soybean	cytosol	18.53	22.62
KRH52601	Soybean	extracellular, golgi	18.95	22.56
KRG94518	Soybean	mitochondrion	18.95	22.44
KRH65052	Soybean	cytosol	14.95	22.19
KRH06951	Soybean	cytosol	18.74	22.03
KRH65051	Soybean	cytosol	15.16	21.95
KRH24879	Soybean	cytosol	18.32	21.91
KRH12864	Soybean	cytosol, plasma membrane	14.95	21.85
KRH56929	Soybean	cytosol	17.89	20.88
KRH54527	Soybean	cytosol	19.37	20.86
KRH63378	Soybean	cytosol	19.16	20.63
KRH03453	Soybean	cytosol	17.68	20.59
KRH29930	Soybean	cytosol	14.95	20.46
KRH74828	Soybean	cytosol	19.37	17.13
KRH45883	Soybean	cytosol	19.37	17.07
KRH70694	Soybean	cytosol	19.16	16.88
KRG99114	Soybean	cytosol	18.95	16.7

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100787256	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02008138	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_13G086000	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1LW17
InterPro:IPR001810	InterPro:IPR015915	EnsemblPlants:KRH18847	ProteinID:KRH18847	ProteinID:KRH18847.1	InterPro:Kelch-typ_b-propeller
InterPro:Kelch_1	PFAM:PF01344	PFAM:PF12937	PFscan:PS50181	PANTHER:PTHR24414	PANTHER:PTHR24414:SF39
SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI000233B0B9	:

Description

hypothetical protein

Coordinates

chr13:-:19805948..19808847

Molecular Weight (calculated)

53062.4 Da

IEP (calculated)

5.739

GRAVY (calculated)

-0.242

Length

475 amino acids

Sequence
(BLAST)

001: MGSLFSMANT KANQSESSEI SPNETSKRQR MSPASVEECP RLIPNLPDEL SLQIIARLPR ICYYHVRLVS RKWKATITSS ELYKVRKELG TTEEWLYLLV
101: RIGQNKLLWH ALDPRSRIWQ RLPIMPSVVD EEDSQKGSSG LWMWNMVKGI RIAEIIRGLL GQKDALDDMP FCGCAFGAVD GCLYVLGGFS KSSTMKCVWR
201: FDPIQNAWKK VNSMSTGRAY CKTGILNNKL YVVGGVSQAG LIPLQSAEVY DPFSDTWSDV PSMPFSRAGV LPTAFLADML KPIATGLTSY KGRLYVPQSL
301: YSWPFFVDVG GEIYDPETNS WMEMPNGMGE GWPVKQAGTK LSVVVNGELY AFDPSNSVDS GRIKVYDQGE DEWKVVIGKV PVYDFTESES PYLLAGFHGK
401: LHFITKDANH DISVLKADHC SNVDSSPSTS APQSPKYMED ELLRESAETH EAVWKLVASK GFEQAELINC QVIDI

Best Arabidopsis Sequence Match ( AT1G22040.1 )
(BLAST)

001: MGSVMSLSCS KRKATSQDVE CSSESRKRRK ISSENDEEEC CRLIPSLPDE LSIQILARLP RICYSSVRLV SRRWRSAVST SEVYSLRKEL GRTEEWLYVL
101: TKGHEDKLLW YALDPVSTKW QRLPPMPVVV YEEESRKSLS GLWNMITPSF NVGAIVRSFL GRRDSSEQMP FCGCAIGAVD GGLYVIGGLS RSKTVSCVWR
201: FDPILNSWSE VSSMLASRAY SKTGVLNKKL YVVGGVDRGR GGLSPLQSAE VYDPSTDAWS EVPSMPFSKA QVLPNAFLAD LLKPIATGMT CYNGRLCVPQ
301: SLYSWPFFVD VGGEVYDPET NLWVEMPSGM GEGWPARQAG TKLSVVVDGE LYAFDPSSSM ENGKIKVYDQ KEDTWKVVIG EVPVYDLTDS ESPYLLAGFH
401: GKLHFITRDP NHNVTVLRAD VPNIPVSSSS SSSSSVSIPH LKTNAPNKSD TVTWKLIATK DFGAAELVSC QVIDI

Arabidopsis Description

F-box/kelch-repeat protein At1g22040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM55]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.