CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06951	Soybean	cytosol	94.02	93.32
KRH57678	Soybean	cytosol	62.34	63.45
PGSC0003DMT400021985	Potato	nucleus	56.36	54.2
CDY66938	Canola	cytosol, mitochondrion	23.19	52.84
CDY53460	Canola	cytosol	21.95	50.0
Bra032052.1-P	Field mustard	cytosol	21.95	50.0
AT3G27150.1	Thale cress	cytosol	50.12	47.63
Bra032983.1-P	Field mustard	cytosol	48.63	47.45
CDY28493	Canola	cytosol	48.38	47.2
CDY34175	Canola	cytosol	48.38	47.2
CDY65956	Canola	cytosol	21.95	46.81
VIT_14s0068g02150.t01	Wine grape	cytosol	55.36	46.54
CDY13683	Canola	cytosol	49.13	45.5
CDY52395	Canola	cytosol	49.13	45.5
Bra025251.1-P	Field mustard	cytosol	48.88	45.27
CDX82682	Canola	cytosol	34.41	44.09
AT5G40680.1	Thale cress	mitochondrion	44.64	43.13
CDY36146	Canola	cytosol	43.14	41.49
CDY63005	Canola	cytosol	42.89	41.25
CDY69929	Canola	cytosol	42.64	41.01
CDY64780	Canola	cytosol	43.89	40.55
Bra010784.1-P	Field mustard	cytosol	39.65	40.05
CDX90239	Canola	cytosol	39.65	40.05
CDY49979	Canola	cytosol	40.4	39.71
Bra034944.1-P	Field mustard	cytosol	40.4	39.61
Solyc07g009410.2.1	Tomato	cytosol	43.14	38.79
CDY12345	Canola	cytosol	43.14	38.02
KRH26429	Soybean	cytosol	34.41	37.91
KRH29930	Soybean	cytosol	31.17	36.02
KRH22905	Soybean	cytosol	34.16	35.22
KRH12864	Soybean	cytosol, plasma membrane	27.93	34.46
KRH24879	Soybean	cytosol	33.67	34.01
CDY49977	Canola	cytosol	37.91	32.34
KRH03453	Soybean	cytosol	32.67	32.11
KRH56929	Soybean	cytosol	32.17	31.7
KRH54527	Soybean	cytosol	34.66	31.52
KRH63378	Soybean	cytosol	34.66	31.52
KRH45883	Soybean	cytosol	35.41	26.35
KRH70694	Soybean	cytosol	35.16	26.16
KRH74828	Soybean	cytosol	34.66	25.88
KRG99114	Soybean	cytosol	34.66	25.79
KRH71403	Soybean	cytosol	17.71	20.64
KRH67237	Soybean	cytosol	17.71	20.58
KRH32035	Soybean	cytosol	17.46	20.35
KRG95556	Soybean	cytosol	17.46	20.29
KRH72270	Soybean	cytosol	6.48	19.85
KRH62415	Soybean	cytosol	13.22	19.2
KRH18847	Soybean	cytosol	22.44	18.95
KRG93237	Soybean	cytosol	20.2	18.93
KRH56558	Soybean	cytosol	20.2	18.93
KRH42654	Soybean	cytosol	18.2	18.81
KRG97442	Soybean	cytosol, nucleus, peroxisome	17.21	18.65
KRH11716	Soybean	cytosol, golgi, plastid	17.21	18.55
KRH31463	Soybean	cytosol	17.71	18.44
KRH42810	Soybean	cytosol	19.7	18.08
KRH58897	Soybean	cytosol	19.7	18.08
KRH16647	Soybean	cytosol, plastid	21.45	18.03
KRH53131	Soybean	cytosol	21.2	17.86
KRH11179	Soybean	mitochondrion, plastid	17.71	17.53
KRH21075	Soybean	mitochondrion	17.46	17.28
KRH36711	Soybean	cytosol	17.21	17.12
KRG93186	Soybean	cytosol	16.96	17.09
KRH58301	Soybean	cytosol	20.45	17.05
KRH48153	Soybean	cytosol	15.21	16.85
KRH42190	Soybean	cytosol, plastid	20.2	16.84
KRH48156	Soybean	cytosol	14.46	16.02
KRH65052	Soybean	cytosol	12.72	15.94
KRH48154	Soybean	cytosol	13.97	15.22
KRH65051	Soybean	cytosol	10.72	13.11
KRH61941	Soybean	plastid	11.47	13.11
KRH52601	Soybean	extracellular, golgi	11.97	12.03
KRH55297	Soybean	cytosol	8.73	11.95

Protein Annotations

EntrezGene:100783477	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02011971	EnsemblPlantsGene:GLYMA_19G090600	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019005
GO:GO:0019538	GO:GO:0030162	GO:GO:0031625	GO:GO:0042787	GO:GO:0043161	UniProt:I1N7R5
InterPro:IPR015915	EnsemblPlants:KRG94518	ProteinID:KRG94518	ProteinID:KRG94518.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
PFAM:PF01344	PANTHER:PTHR24413	PANTHER:PTHR24413:SF160	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI00023D9AC9

Description

hypothetical protein

Coordinates

chr19:+:32192151..32194983

Molecular Weight (calculated)

45010.7 Da

IEP (calculated)

7.336

GRAVY (calculated)

-0.314

Length

401 amino acids

Sequence
(BLAST)

001: MTNRKALPVP TFVSGFCFSY HSSQKKMRVR ELSPSDGNGS STNEDEPLPQ DADYINVLSL SDELETSILA RFPRSQHWKL CFLNKRFLAL SRSGEIYKIR
101: RELGFKEPSV FMLVSGESNW WGMEWPFMSS KKLPPIQSDY NFEFGDKESF CAGSHLLVSG KEIDGAVIWR FNSIKNEWRK GPSMINPRCL FASATCSAIA
201: FVAGGLDAGT YTQVLDSAEK YNSESRCWEP LPRMNKKRKF CSGCFMDNKF YVLGGQDEHG KDLTCGEFFD GKANSWNLIP DMWKDIVSQS PPLLAVVNNE
301: LYTLDASSNE LKVYVKGTNT WKTLGVVPVR ADAQGGWGVA FKSLGDELLV IGAPSMPHIV HALSMYTCCP DPDDEKLRWR QIGCGSIQLN HFIRNCAVMG
401: T

Best Arabidopsis Sequence Match ( AT3G27150.2 )
(BLAST)

001: MLTLGEDQIG RIGASSSWSR SKKLRVHRYE IPDLNVEPSL DWDGEETGEA TKALSSTCLK PKDADYCLLN VPQLVYELEV EILARVPRFE YWKLKLLNKG
101: FSRLLKSDEI FKVRRERGVV EPSVFMLSSG DTCWTMFDKG FGNCQKLPEL PSDICFLHGD KESLCAGTHL IVTGKEEKSI ALWRYELETS KWFKGPAMIT
201: PRILFASATC GTVVFVAGGL KIEGNGTMEV VDSVEKYDSK TKTWTLLRGM HKRRKFCSGC YLRGKFYVLG GRDENGQNLT CGESYDEKTN TWELIPDILK
301: DMSFSSVQSP PLIAVVGDDL YSLETSANEL RVYDANANSW KKLGDVPVRA KSNGGWGVAF KSLGDKLLVI GASAGPSRAE TMSVYTSRPS ANPANKLYWE
401: ESKRCCGVRF NHFILNCCVM IA

Arabidopsis Description

F-box/kelch-repeat protein At3g27150 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.