Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34175 | Canola | cytosol | 96.35 | 96.35 |
| AT3G27150.1 | Thale cress | cytosol | 79.32 | 77.25 |
| CDY52395 | Canola | cytosol | 81.02 | 76.91 |
| CDY13683 | Canola | cytosol | 81.02 | 76.91 |
| CDY66938 | Canola | cytosol, mitochondrion | 26.28 | 61.36 |
| CDY53460 | Canola | cytosol | 25.3 | 59.09 |
| CDY65956 | Canola | cytosol | 25.79 | 56.38 |
| CDY49979 | Canola | cytosol | 52.55 | 52.94 |
| CDY64780 | Canola | cytosol | 55.72 | 52.77 |
| CDX82682 | Canola | cytosol | 39.66 | 52.08 |
| CDX90239 | Canola | cytosol | 49.88 | 51.64 |
| CDY36146 | Canola | cytosol | 52.07 | 51.32 |
| CDY63005 | Canola | cytosol | 51.82 | 51.08 |
| PGSC0003DMT400021985 | Potato | nucleus | 51.09 | 50.36 |
| CDY69929 | Canola | cytosol | 51.09 | 50.36 |
| KRH57678 | Soybean | cytosol | 47.2 | 49.24 |
| CDY12345 | Canola | cytosol | 54.26 | 49.01 |
| KRG94518 | Soybean | mitochondrion | 47.2 | 48.38 |
| KRH06951 | Soybean | cytosol | 46.72 | 47.52 |
| VIT_14s0068g02150.t01 | Wine grape | cytosol | 52.55 | 45.28 |
| CDY49977 | Canola | cytosol | 46.47 | 40.64 |
| CDY33755 | Canola | cytosol | 10.22 | 34.15 |
| Solyc07g009410.2.1 | Tomato | cytosol | 36.98 | 34.08 |
| CDY31534 | Canola | cytosol | 29.68 | 32.53 |
| CDX80156 | Canola | cytosol | 29.68 | 32.19 |
| CDY70379 | Canola | cytosol | 12.17 | 31.65 |
| CDX81631 | Canola | nucleus | 30.41 | 30.56 |
| CDY60836 | Canola | cytosol | 28.22 | 30.53 |
| CDY62015 | Canola | nucleus | 30.41 | 30.12 |
| CDY09349 | Canola | nucleus | 32.36 | 29.95 |
| CDX73096 | Canola | cytosol | 29.2 | 29.93 |
| CDY52764 | Canola | cytosol | 30.9 | 29.88 |
| CDY49094 | Canola | nucleus | 30.66 | 29.72 |
| CDY46430 | Canola | cytosol | 30.66 | 29.58 |
| CDY62176 | Canola | nucleus | 32.12 | 29.53 |
| CDY17425 | Canola | cytosol | 28.47 | 29.18 |
| CDY16205 | Canola | nucleus | 29.93 | 29.08 |
| CDY45190 | Canola | nucleus | 31.87 | 28.92 |
| CDX96551 | Canola | cytosol | 28.47 | 28.82 |
| CDX68177 | Canola | cytosol | 28.95 | 28.54 |
| CDY03028 | Canola | cytosol | 31.14 | 28.51 |
| CDX85842 | Canola | cytosol | 29.44 | 28.34 |
| CDY33754 | Canola | nucleus | 14.6 | 24.0 |
| CDY15708 | Canola | cytosol | 17.27 | 20.7 |
| CDY52247 | Canola | cytosol | 15.82 | 20.31 |
| CDY64382 | Canola | plastid | 16.79 | 20.18 |
| CDY03923 | Canola | cytosol | 16.55 | 20.12 |
| CDX90085 | Canola | plastid | 16.55 | 19.71 |
| CDY66857 | Canola | cytosol | 17.03 | 19.66 |
| CDY11811 | Canola | plastid | 16.3 | 19.42 |
| CDY26117 | Canola | cytosol | 20.44 | 19.31 |
| CDY08233 | Canola | mitochondrion | 20.44 | 19.31 |
| CDY70128 | Canola | cytosol | 15.57 | 18.99 |
| CDY12647 | Canola | cytosol | 16.55 | 18.78 |
| CDY54825 | Canola | cytosol | 8.76 | 18.65 |
| CDY36145 | Canola | cytosol | 15.82 | 18.57 |
| CDX96091 | Canola | cytosol | 16.79 | 18.5 |
| CDY01812 | Canola | cytosol | 16.79 | 18.5 |
| CDX81755 | Canola | cytosol | 17.52 | 18.46 |
| CDY02451 | Canola | cytosol | 19.46 | 18.39 |
| CDY33062 | Canola | mitochondrion, plastid | 19.46 | 18.39 |
| CDY10574 | Canola | cytosol | 19.46 | 18.39 |
| CDY33348 | Canola | cytosol | 8.03 | 18.33 |
| CDY24045 | Canola | mitochondrion | 19.22 | 18.16 |
| CDY58259 | Canola | cytosol | 15.33 | 18.16 |
| CDY18573 | Canola | cytosol | 15.33 | 18.1 |
| CDY04697 | Canola | cytosol | 9.73 | 17.94 |
| CDX82306 | Canola | cytosol | 15.09 | 17.92 |
| CDY22982 | Canola | cytosol | 15.09 | 17.92 |
| CDX99248 | Canola | cytosol | 15.09 | 17.82 |
| CDY30645 | Canola | nucleus | 9.49 | 17.49 |
| CDX96822 | Canola | extracellular, vacuole | 18.0 | 17.13 |
| CDX99882 | Canola | mitochondrion, plastid | 16.55 | 17.09 |
| CDY51562 | Canola | cytosol | 14.84 | 16.99 |
| CDY26295 | Canola | mitochondrion, plastid | 16.3 | 16.83 |
| CDY00415 | Canola | mitochondrion | 8.76 | 16.82 |
| CDY58793 | Canola | cytosol | 14.6 | 16.71 |
| CDY01301 | Canola | cytosol | 6.33 | 16.56 |
| CDY35075 | Canola | cytosol | 7.3 | 16.3 |
| CDY64883 | Canola | golgi, plastid | 16.3 | 16.3 |
| CDY35074 | Canola | cytosol | 8.27 | 16.27 |
| CDY01300 | Canola | cytosol | 8.76 | 16.07 |
| CDY34765 | Canola | cytosol | 14.36 | 15.86 |
| CDX76807 | Canola | cytosol | 14.11 | 15.72 |
| CDY15707 | Canola | cytosol, plastid | 12.65 | 14.73 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 11.92 | 13.88 |
| CDY17172 | Canola | cytosol | 3.65 | 10.42 |
Protein Annotations
| EnsemblPlants:CDY28493 | EnsemblPlantsGene:GSBRNA2T00040394001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF160 | PFAM:PF01344 |
| ProteinID:CDY28493 | ProteinID:CDY28493.1 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI0004EE69C2 |
| UniProt:A0A078GV48 | MapMan:35.1 | : | : | : | : |
Description
BnaC02g36670DBnaC02g36670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GV48]
Coordinates
chrLK032221:+:137423..138658
Molecular Weight (calculated)
46592.8 Da
IEP (calculated)
7.792
GRAVY (calculated)
-0.358
Length
411 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTLGDVHTG RFGANSSSSR PRKVRIHGYK IPDLNLDPCL DCDEEETRQV VVGKHQDADY VQNVPQLAYE LEVEILSRVP RFEYWKLNLL SKRFSRLLKS
101: GKIFKVRRDR GVVEPSVFML SNGDTRWTIF DKDFEKFQKV PELPSDMCFF RGDKESLCAG THLIVTGKEE KSIALWRYEV ETSKWFKGPA MITPRILFAS
201: ATCGTVVFVA GGLDASLEVM NRAEKYDSET KTWMHLNAMH KRRKFCSGCY LRGKFYVIGG RDERDQNLTC GERYDEGTDT WELIPDILKD MSFSSVQSPP
301: LIAVVNEDLY SLETSSNELR VYDTNANVWK RLGDVPVRAK SNGGWGVAFK SLGDKLLVIG ASSGPSRTET MSVYTCNPSA DPKDKLVWEE STRCCGVRLS
401: HFILNCCVMI A
101: GKIFKVRRDR GVVEPSVFML SNGDTRWTIF DKDFEKFQKV PELPSDMCFF RGDKESLCAG THLIVTGKEE KSIALWRYEV ETSKWFKGPA MITPRILFAS
201: ATCGTVVFVA GGLDASLEVM NRAEKYDSET KTWMHLNAMH KRRKFCSGCY LRGKFYVIGG RDERDQNLTC GERYDEGTDT WELIPDILKD MSFSSVQSPP
301: LIAVVNEDLY SLETSSNELR VYDTNANVWK RLGDVPVRAK SNGGWGVAFK SLGDKLLVIG ASSGPSRTET MSVYTCNPSA DPKDKLVWEE STRCCGVRLS
401: HFILNCCVMI A
001: MLTLGEDQIG RIGASSSWSR SKKLRVHRYE IPDLNVEPSL DWDGEETGEA TKALSSTCLK PKDADYCLLN VPQLVYELEV EILARVPRFE YWKLKLLNKG
101: FSRLLKSDEI FKVRRERGVV EPSVFMLSSG DTCWTMFDKG FGNCQKLPEL PSDICFLHGD KESLCAGTHL IVTGKEEKSI ALWRYELETS KWFKGPAMIT
201: PRILFASATC GTVVFVAGGL KIEGNGTMEV VDSVEKYDSK TKTWTLLRGM HKRRKFCSGC YLRGKFYVLG GRDENGQNLT CGESYDEKTN TWELIPDILK
301: DMSFSSVQSP PLIAVVGDDL YSLETSANEL RVYDANANSW KKLGDVPVRA KSNGGWGVAF KSLGDKLLVI GASAGPSRAE TMSVYTSRPS ANPANKLYWE
401: ESKRCCGVRF NHFILNCCVM IA
101: FSRLLKSDEI FKVRRERGVV EPSVFMLSSG DTCWTMFDKG FGNCQKLPEL PSDICFLHGD KESLCAGTHL IVTGKEEKSI ALWRYELETS KWFKGPAMIT
201: PRILFASATC GTVVFVAGGL KIEGNGTMEV VDSVEKYDSK TKTWTLLRGM HKRRKFCSGC YLRGKFYVLG GRDENGQNLT CGESYDEKTN TWELIPDILK
301: DMSFSSVQSP PLIAVVGDDL YSLETSANEL RVYDANANSW KKLGDVPVRA KSNGGWGVAF KSLGDKLLVI GASAGPSRAE TMSVYTSRPS ANPANKLYWE
401: ESKRCCGVRF NHFILNCCVM IA
Arabidopsis Description
F-box/kelch-repeat protein At3g27150 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI89]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.