Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- extracellular 3
- golgi 2
- plasma membrane 2
- endoplasmic reticulum 2
- vacuole 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G16250.2 | Thale cress | cytosol | 81.48 | 91.91 |
| CDX81755 | Canola | cytosol | 79.17 | 87.69 |
| CDY33348 | Canola | cytosol | 29.4 | 70.56 |
| CDY35075 | Canola | cytosol | 28.47 | 66.85 |
| CDY35074 | Canola | cytosol | 31.25 | 64.59 |
| CDY17172 | Canola | cytosol | 20.83 | 62.5 |
| Solyc07g042950.1.1 | Tomato | cytosol | 24.54 | 59.55 |
| Solyc07g042960.1.1 | Tomato | cytosol, mitochondrion | 23.38 | 57.39 |
| GSMUA_Achr2P18470_001 | Banana | cytosol | 40.05 | 40.61 |
| CDY22982 | Canola | cytosol | 25.0 | 31.21 |
| CDX82306 | Canola | cytosol | 24.77 | 30.92 |
| CDY58259 | Canola | cytosol | 24.31 | 30.26 |
| CDY18573 | Canola | cytosol | 24.31 | 30.17 |
| CDX99248 | Canola | cytosol | 23.61 | 29.31 |
| CDY12647 | Canola | cytosol | 18.29 | 21.82 |
| CDX96091 | Canola | cytosol | 18.52 | 21.45 |
| CDY01812 | Canola | cytosol | 18.52 | 21.45 |
| CDY26117 | Canola | cytosol | 21.3 | 21.15 |
| CDY08233 | Canola | mitochondrion | 21.3 | 21.15 |
| CDY02451 | Canola | cytosol | 21.3 | 21.15 |
| CDY01301 | Canola | cytosol | 7.64 | 21.02 |
| CDY34765 | Canola | cytosol | 18.06 | 20.97 |
| CDY10574 | Canola | cytosol | 21.06 | 20.92 |
| CDY31534 | Canola | cytosol | 18.06 | 20.8 |
| CDX80156 | Canola | cytosol | 18.06 | 20.58 |
| CDY24045 | Canola | mitochondrion | 20.6 | 20.46 |
| CDY33062 | Canola | mitochondrion, plastid | 20.6 | 20.46 |
| CDY51562 | Canola | cytosol | 16.9 | 20.33 |
| CDY11811 | Canola | plastid | 16.2 | 20.29 |
| CDY36145 | Canola | cytosol | 16.44 | 20.29 |
| CDX76807 | Canola | cytosol | 17.13 | 20.05 |
| CDX90085 | Canola | plastid | 15.97 | 20.0 |
| CDY64382 | Canola | plastid | 15.74 | 19.88 |
| CDY70128 | Canola | cytosol | 15.51 | 19.88 |
| CDY15708 | Canola | cytosol | 15.74 | 19.83 |
| CDY03923 | Canola | cytosol | 15.51 | 19.82 |
| CDY58793 | Canola | cytosol | 16.44 | 19.78 |
| CDY62015 | Canola | nucleus | 18.98 | 19.76 |
| CDY64883 | Canola | golgi, plastid | 18.75 | 19.71 |
| CDY16205 | Canola | nucleus | 19.21 | 19.62 |
| CDY49094 | Canola | nucleus | 19.21 | 19.58 |
| CDX96551 | Canola | cytosol | 18.06 | 19.21 |
| CDY54825 | Canola | cytosol | 8.56 | 19.17 |
| CDY66857 | Canola | cytosol | 15.74 | 19.1 |
| CDY26295 | Canola | mitochondrion, plastid | 17.59 | 19.1 |
| CDX99882 | Canola | mitochondrion, plastid | 17.59 | 19.1 |
| CDY52764 | Canola | cytosol | 18.75 | 19.06 |
| CDY46430 | Canola | cytosol | 18.75 | 19.01 |
| CDX82682 | Canola | cytosol | 13.66 | 18.85 |
| CDX81631 | Canola | nucleus | 17.82 | 18.83 |
| CDY66938 | Canola | cytosol, mitochondrion | 7.64 | 18.75 |
| CDX68177 | Canola | cytosol | 17.82 | 18.47 |
| CDX73096 | Canola | cytosol | 17.13 | 18.45 |
| CDY70379 | Canola | cytosol | 6.71 | 18.35 |
| CDY34175 | Canola | cytosol | 17.36 | 18.25 |
| CDY52395 | Canola | cytosol | 18.29 | 18.24 |
| CDY60836 | Canola | cytosol | 15.97 | 18.16 |
| CDY52247 | Canola | cytosol | 13.43 | 18.12 |
| CDX85842 | Canola | cytosol | 17.82 | 18.03 |
| CDY13683 | Canola | cytosol | 18.06 | 18.01 |
| CDY28493 | Canola | cytosol | 17.13 | 18.0 |
| CDY62176 | Canola | nucleus | 18.52 | 17.9 |
| CDY33755 | Canola | cytosol | 5.09 | 17.89 |
| CDY09349 | Canola | nucleus | 18.29 | 17.79 |
| CDY00415 | Canola | mitochondrion | 8.8 | 17.76 |
| CDY53460 | Canola | cytosol | 7.18 | 17.61 |
| CDY15707 | Canola | cytosol, plastid | 14.35 | 17.56 |
| CDY04697 | Canola | cytosol | 9.03 | 17.49 |
| CDY45190 | Canola | nucleus | 18.29 | 17.44 |
| CDY01300 | Canola | cytosol | 9.03 | 17.41 |
| CDX90239 | Canola | cytosol | 15.97 | 17.38 |
| CDY03028 | Canola | cytosol | 18.06 | 17.37 |
| CDY33754 | Canola | nucleus | 9.95 | 17.2 |
| CDY30645 | Canola | nucleus | 8.8 | 17.04 |
| CDY69929 | Canola | cytosol | 16.44 | 17.03 |
| CDY17425 | Canola | cytosol | 15.74 | 16.96 |
| CDY63005 | Canola | cytosol | 16.2 | 16.79 |
| CDY36146 | Canola | cytosol | 15.97 | 16.55 |
| CDY65956 | Canola | cytosol | 6.94 | 15.96 |
| CDY64780 | Canola | cytosol | 15.97 | 15.9 |
| CDY49979 | Canola | cytosol | 14.81 | 15.69 |
| CDY12345 | Canola | cytosol | 15.74 | 14.95 |
| CDY49977 | Canola | cytosol | 15.28 | 14.04 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 10.42 | 12.75 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EnsemblPlants:CDX96822 | ProteinID:CDX96822 | ProteinID:CDX96822.1 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00103055001 | InterPro:IPR001810 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF00646 | PFAM:PF01344 | PANTHER:PTHR24414 |
| PANTHER:PTHR24414:SF41 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI0004EE1EAF | SEG:seg |
Description
BnaA08g23650D
Coordinates
chrLK031895:-:1091776..1093538
Molecular Weight (calculated)
48625.0 Da
IEP (calculated)
6.501
GRAVY (calculated)
-0.147
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDQISILTH LKWIYPFRLS SSSLSLVSPV FVFQKLDLLS EESCYLSQIM DSTEQSIIPG LPDDLALRCL AKLSHGHHGA LECVSRGWRD LLRSADYSCF
101: KSRNGWFGTW LFVLTEQSKN QWVAYDPEAD RWHPLPRTRA VQDGWHHSGF ACVCVSNCLL VIGGCYAPSV SSFPHQKPVV TGDVMRFDPF KKEWRMVASM
201: RTPRTHFACC AVSGKVYVAG GRNLTHSRGI TSAEVYDPVA DRWEELPAMP RPQMDCSGLS YRGSFHVLSD QVGFAEQSFS EVFNPLEMSW STVEDIWPFS
301: RAMQFAVQVM KNDRVYTIVD WGESLIKTRD TDEGEWYNVG SVPSVVLANH PRELEAFGYG FAALRDELFV IGGKVLKWEE SGAGRFDIVR LSVVRVCNPL
401: DRPLNWRETK PMCIPAGGSI IGCASLEESS LP
101: KSRNGWFGTW LFVLTEQSKN QWVAYDPEAD RWHPLPRTRA VQDGWHHSGF ACVCVSNCLL VIGGCYAPSV SSFPHQKPVV TGDVMRFDPF KKEWRMVASM
201: RTPRTHFACC AVSGKVYVAG GRNLTHSRGI TSAEVYDPVA DRWEELPAMP RPQMDCSGLS YRGSFHVLSD QVGFAEQSFS EVFNPLEMSW STVEDIWPFS
301: RAMQFAVQVM KNDRVYTIVD WGESLIKTRD TDEGEWYNVG SVPSVVLANH PRELEAFGYG FAALRDELFV IGGKVLKWEE SGAGRFDIVR LSVVRVCNPL
401: DRPLNWRETK PMCIPAGGSI IGCASLEESS LP
001: MESIEQSIIP GLPDDLALRC IAKLSHGYHG VLECVSRGWR DLVRGADYSC YKARNGWSGS WLFVLTERSK NQWVAYDPEA DRWHPLPRTR AVQDGWHHSG
101: FACVCVSNCL LVIGGCYAPS VSSFPHQKPV VTKDVMRFDP FKKQWKMVAS MRTPRTHFAC TSVSGKVYVA GGRNLTHSRG IPSAEVYDPV ADRWEELPAM
201: PRPQMDCSGL SYRGCFHVLS DQVGFAEQNS SEVFNPRDMT WSTVEDVWPF SRAMQFAVQV MKNDRVYTIV DWGESLIKTR DTDEGEWYNV GSVPSVVLPN
301: HPRELEAFGY GFAALRNELY VIGGKVLKWE ESGAGRFDIV RLPVVRVCNP LDRPLNWRET KPMCIPAGGS IIGCVSLEES SPP
101: FACVCVSNCL LVIGGCYAPS VSSFPHQKPV VTKDVMRFDP FKKQWKMVAS MRTPRTHFAC TSVSGKVYVA GGRNLTHSRG IPSAEVYDPV ADRWEELPAM
201: PRPQMDCSGL SYRGCFHVLS DQVGFAEQNS SEVFNPRDMT WSTVEDVWPF SRAMQFAVQV MKNDRVYTIV DWGESLIKTR DTDEGEWYNV GSVPSVVLPN
301: HPRELEAFGY GFAALRNELY VIGGKVLKWE ESGAGRFDIV RLPVVRVCNP LDRPLNWRET KPMCIPAGGS IIGCVSLEES SPP
Arabidopsis Description
F-box/kelch-repeat protein At1g16250 [Source:UniProtKB/Swiss-Prot;Acc:Q0WW40]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.