Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46430 | Canola | cytosol | 90.07 | 89.44 |
| CDY52764 | Canola | cytosol | 89.36 | 88.94 |
| AT1G26930.1 | Thale cress | cytosol | 86.76 | 87.17 |
| CDY33755 | Canola | cytosol | 18.91 | 65.04 |
| CDY60836 | Canola | cytosol | 54.14 | 60.26 |
| Solyc04g005670.1.1 | Tomato | cytosol | 56.97 | 59.65 |
| CDY62015 | Canola | nucleus | 57.45 | 58.55 |
| TraesCS4D01G286700.1 | Wheat | cytosol | 45.63 | 58.48 |
| CDY62176 | Canola | nucleus | 61.7 | 58.39 |
| CDY09349 | Canola | nucleus | 61.23 | 58.33 |
| CDX81631 | Canola | nucleus | 56.26 | 58.19 |
| PGSC0003DMT400007346 | Potato | nucleus | 59.1 | 57.74 |
| CDY49094 | Canola | nucleus | 57.68 | 57.55 |
| TraesCS4A01G493800.1 | Wheat | cytosol | 34.04 | 57.37 |
| CDY17425 | Canola | cytosol | 54.37 | 57.36 |
| CDY45190 | Canola | nucleus | 60.99 | 56.95 |
| CDY03028 | Canola | cytosol | 60.28 | 56.79 |
| Solyc04g005870.1.1 | Tomato | cytosol | 6.62 | 52.83 |
| CDY33754 | Canola | nucleus | 30.97 | 52.4 |
| CDX73096 | Canola | cytosol | 49.65 | 52.37 |
| GSMUA_Achr8P01380_001 | Banana | cytosol | 47.04 | 52.37 |
| CDX68177 | Canola | cytosol | 51.06 | 51.8 |
| CDX96551 | Canola | cytosol | 49.41 | 51.48 |
| CDX85842 | Canola | cytosol | 51.54 | 51.05 |
| CDY70379 | Canola | cytosol | 18.91 | 50.63 |
| GSMUA_Achr1P21630_001 | Banana | cytosol | 44.92 | 50.4 |
| TraesCS4A01G016200.1 | Wheat | cytosol | 51.3 | 50.35 |
| TraesCS7A01G004600.1 | Wheat | cytosol | 43.26 | 50.27 |
| TraesCS6B01G334300.1 | Wheat | cytosol, nucleus, plastid | 50.35 | 50.12 |
| TraesCS6D01G285100.1 | Wheat | cytosol, nucleus, plastid | 50.35 | 50.12 |
| TraesCS6A01G306000.1 | Wheat | cytosol | 50.12 | 49.88 |
| Zm00001d052253_P001 | Maize | cytosol | 49.88 | 49.88 |
| KXG40080 | Sorghum | cytosol | 50.35 | 49.77 |
| HORVU6Hr1G075590.1 | Barley | cytosol, nucleus, plastid | 49.88 | 49.65 |
| KXG30756 | Sorghum | cytosol | 49.65 | 49.41 |
| PGSC0003DMT400059324 | Potato | cytosol | 56.03 | 49.38 |
| Os02t0748300-01 | Rice | cytosol | 49.65 | 49.3 |
| Os03t0171600-01 | Rice | cytosol | 50.12 | 49.19 |
| KRH45883 | Soybean | cytosol | 62.41 | 48.98 |
| HORVU4Hr1G075310.1 | Barley | cytosol | 50.83 | 48.97 |
| Zm00001d027856_P001 | Maize | cytosol | 49.65 | 48.95 |
| GSMUA_Achr4P09990_001 | Banana | cytosol | 49.41 | 48.72 |
| Zm00001d048310_P001 | Maize | cytosol | 49.17 | 48.6 |
| TraesCS7D01G007100.1 | Wheat | cytosol | 42.32 | 48.12 |
| VIT_01s0026g02080.t01 | Wine grape | nucleus | 61.23 | 47.87 |
| Zm00001d014203_P001 | Maize | cytosol, nucleus, plastid | 50.12 | 47.86 |
| GSMUA_Achr7P20970_001 | Banana | cytosol | 44.68 | 47.85 |
| KRG99114 | Soybean | cytosol | 60.76 | 47.68 |
| KRH74828 | Soybean | cytosol | 60.28 | 47.49 |
| KRH70694 | Soybean | cytosol | 60.05 | 47.12 |
| Zm00001d033012_P001 | Maize | cytosol | 49.41 | 46.86 |
| OQU91835 | Sorghum | cytosol, nucleus, plastid | 49.17 | 46.85 |
| TraesCS7D01G005100.1 | Wheat | cytosol | 23.4 | 46.05 |
| Zm00001d048898_P001 | Maize | cytosol | 47.04 | 45.75 |
| GSMUA_Achr4P00520_001 | Banana | cytosol | 41.84 | 45.5 |
| GSMUA_Achr8P17960_001 | Banana | nucleus | 44.44 | 45.19 |
| Os11t0602800-01 | Rice | nucleus | 46.1 | 45.14 |
| TraesCS4A01G487800.1 | Wheat | cytosol | 27.19 | 44.57 |
| Zm00001d007596_P001 | Maize | nucleus, plastid | 46.1 | 44.22 |
| GSMUA_Achr10P... | Banana | nucleus | 45.39 | 44.14 |
| OQU83795 | Sorghum | cytosol | 45.39 | 43.05 |
| PGSC0003DMT400091785 | Potato | cytosol, mitochondrion, plastid | 16.08 | 43.04 |
| HORVU2Hr1G057140.1 | Barley | cytosol | 18.91 | 43.01 |
| HORVU2Hr1G057150.1 | Barley | cytosol | 18.91 | 43.01 |
| CDY31534 | Canola | cytosol | 37.59 | 42.4 |
| CDX80156 | Canola | cytosol | 37.35 | 41.69 |
| GSMUA_Achr2P14920_001 | Banana | mitochondrion | 46.81 | 41.42 |
| TraesCS4A01G492300.1 | Wheat | cytosol, golgi, plastid | 37.59 | 41.3 |
| TraesCS4A01G489600.1 | Wheat | cytosol | 36.88 | 41.27 |
| TraesCS4A01G489300.1 | Wheat | cytosol | 37.12 | 41.21 |
| GSMUA_Achr3P01570_001 | Banana | golgi | 46.57 | 40.29 |
| PGSC0003DMT400007391 | Potato | cytosol | 12.06 | 38.06 |
| GSMUA_Achr4P24130_001 | Banana | nucleus | 44.92 | 36.75 |
| Solyc05g007220.2.1 | Tomato | nucleus | 55.79 | 36.65 |
| HORVU7Hr1G000010.5 | Barley | cytosol | 36.88 | 35.62 |
| CDY66938 | Canola | cytosol, mitochondrion | 14.42 | 34.66 |
| CDX82682 | Canola | cytosol | 24.82 | 33.55 |
| CDY53460 | Canola | cytosol | 13.71 | 32.95 |
| CDY65956 | Canola | cytosol | 14.42 | 32.45 |
| HORVU7Hr1G000070.1 | Barley | cytosol | 39.48 | 31.81 |
| TraesCS4A01G491100.1 | Wheat | cytosol | 38.77 | 31.18 |
| CDY28493 | Canola | cytosol | 29.08 | 29.93 |
| CDY34175 | Canola | cytosol | 29.08 | 29.93 |
| CDY52395 | Canola | cytosol | 30.5 | 29.79 |
| CDY13683 | Canola | cytosol | 30.02 | 29.33 |
| CDY36146 | Canola | cytosol | 28.37 | 28.78 |
| CDY63005 | Canola | cytosol | 28.37 | 28.78 |
| CDY64780 | Canola | cytosol | 29.31 | 28.57 |
| CDY69929 | Canola | cytosol | 28.13 | 28.54 |
| TraesCS4A01G493200.1 | Wheat | cytosol, plasma membrane | 31.68 | 28.27 |
| CDX90239 | Canola | cytosol | 25.3 | 26.95 |
| CDY49979 | Canola | cytosol | 25.77 | 26.72 |
| CDY12345 | Canola | cytosol | 28.61 | 26.59 |
| CDY01301 | Canola | cytosol | 9.46 | 25.48 |
| CDY04697 | Canola | cytosol | 11.58 | 21.97 |
| CDY30645 | Canola | nucleus | 11.58 | 21.97 |
| CDY18573 | Canola | cytosol | 17.73 | 21.55 |
| CDX96091 | Canola | cytosol | 18.68 | 21.18 |
| CDY01812 | Canola | cytosol | 18.68 | 21.18 |
| CDY58259 | Canola | cytosol | 17.26 | 21.04 |
| CDX81755 | Canola | cytosol | 19.39 | 21.03 |
| CDY12647 | Canola | cytosol | 17.97 | 20.99 |
| CDY49977 | Canola | cytosol | 23.17 | 20.85 |
| CDY51562 | Canola | cytosol | 17.49 | 20.61 |
| CDY33348 | Canola | cytosol | 8.75 | 20.56 |
| CDX82306 | Canola | cytosol | 16.78 | 20.52 |
| CDX99248 | Canola | cytosol | 16.78 | 20.4 |
| CDY22982 | Canola | cytosol | 16.55 | 20.23 |
| CDY64382 | Canola | plastid | 16.31 | 20.18 |
| CDY58793 | Canola | cytosol | 17.02 | 20.06 |
| CDX90085 | Canola | plastid | 16.31 | 20.0 |
| CDY11811 | Canola | plastid | 16.31 | 20.0 |
| CDY36145 | Canola | cytosol | 16.55 | 20.0 |
| CDY70128 | Canola | cytosol | 15.84 | 19.88 |
| CDY52247 | Canola | cytosol | 14.89 | 19.69 |
| CDY66857 | Canola | cytosol | 16.55 | 19.66 |
| CDY35074 | Canola | cytosol | 9.69 | 19.62 |
| CDY15708 | Canola | cytosol | 15.84 | 19.53 |
| CDY03923 | Canola | cytosol | 15.6 | 19.53 |
| CDX96822 | Canola | extracellular, vacuole | 19.62 | 19.21 |
| CDY08233 | Canola | mitochondrion | 19.62 | 19.08 |
| CDY26117 | Canola | cytosol | 19.62 | 19.08 |
| CDY17172 | Canola | cytosol | 6.38 | 18.75 |
| CDY33062 | Canola | mitochondrion, plastid | 19.15 | 18.62 |
| CDY64883 | Canola | golgi, plastid | 17.97 | 18.49 |
| CDX76807 | Canola | cytosol | 16.08 | 18.43 |
| CDY24045 | Canola | mitochondrion | 18.68 | 18.16 |
| CDY34765 | Canola | cytosol | 15.84 | 18.01 |
| CDX99882 | Canola | mitochondrion, plastid | 16.78 | 17.84 |
| CDY02451 | Canola | cytosol | 18.2 | 17.7 |
| CDY10574 | Canola | cytosol | 18.2 | 17.7 |
| CDY54825 | Canola | cytosol | 8.04 | 17.62 |
| CDY26295 | Canola | mitochondrion, plastid | 16.55 | 17.59 |
| CDY35075 | Canola | cytosol | 7.57 | 17.39 |
| CDY00415 | Canola | mitochondrion | 8.04 | 15.89 |
| CDY15707 | Canola | cytosol, plastid | 13.24 | 15.86 |
| CDY01300 | Canola | cytosol | 8.04 | 15.18 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 10.17 | 12.18 |
Protein Annotations
| EnsemblPlants:CDY16205 | EnsemblPlantsGene:GSBRNA2T00090655001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF138 | PFAM:PF01344 |
| ProteinID:CDY16205 | ProteinID:CDY16205.1 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI0004EF3182 |
| UniProt:A0A078FP24 | MapMan:35.1 | : | : | : | : |
Description
BnaA09g29390DBnaA09g29390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FP24]
Coordinates
chrLK032061:-:466219..467667
Molecular Weight (calculated)
47211.0 Da
IEP (calculated)
7.998
GRAVY (calculated)
-0.400
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MFEGRPRDSC LVSTLFSMPS NEAQWSFSLS KKRSLLNSDE TALHNNHKKK IYKLTDNSNN NGENGSSDSG GSLIPGMNKD DSISCLLRCS RAEYCSIASV
101: SRSLRALIRS GEIYRLRRLQ GTLEHWVYFS CHLNEWEAFD PRSKRWMHLP SMPQNECFRY ADKESLAVGT DLLVFGWEVS SYVIYRYSLL TNSWSTGKSM
201: NMPRCLFASA SYGEIAVLAG GCDSNGRILD TAEMYNYEDQ TWSVLPEMNK RRKMCSGVFM DGKFYVFGGI GVGEGNEPKV LTCGEEFNLK TRRWREIPDL
301: SPPRSNQGNG MSAAAMAPPL VAVVNDQLYA ADHAGMAVRR YDKENRVWVK VGSLPEQAGS MNGWGLAFRA SGDQVIVIGG PKAPGEGFIE LNSWVPSDGT
401: PQWHLLGKKQ SVNFVYNCTV MSC
101: SRSLRALIRS GEIYRLRRLQ GTLEHWVYFS CHLNEWEAFD PRSKRWMHLP SMPQNECFRY ADKESLAVGT DLLVFGWEVS SYVIYRYSLL TNSWSTGKSM
201: NMPRCLFASA SYGEIAVLAG GCDSNGRILD TAEMYNYEDQ TWSVLPEMNK RRKMCSGVFM DGKFYVFGGI GVGEGNEPKV LTCGEEFNLK TRRWREIPDL
301: SPPRSNQGNG MSAAAMAPPL VAVVNDQLYA ADHAGMAVRR YDKENRVWVK VGSLPEQAGS MNGWGLAFRA SGDQVIVIGG PKAPGEGFIE LNSWVPSDGT
401: PQWHLLGKKQ SVNFVYNCTV MSC
001: MFEGRPRDSC LVSTLFTMPS HKETKWSFLV SGKRSFLNND ESDLHFKKMY KLTTDSSEGE DNGSSSDSGT LIPGMNRDDS LSCLIRCSRA DYCSIASVNR
101: SLRSLIRSGE IYRLRRLQGT LEHWVYFSCH LNEWEAFDPR SKRWMHLPSM PQNECFRYAD KESLAVGTDL LVFGWEVSSY VIYRYSLLTN SWSTAKSMNM
201: PRCLFGSASY GEIAVLAGGC DSSGRILDTA ELYNYEDQTW LVLPGMNKRR KMCSGVFMDG KFYVIGGIGV GEENEPKVLT CGEEFDLKTR KWTEIPEMSP
301: PRSNQGNGMS AAAMAPPLVA VVNDQLYAAD HAGMAVRRYD KEKRVWNKVG NLPEQAGSMN GWGLAFRACG DRIIVIGGPK APGEGFIELN SWVPSVTTPE
401: WHLLGKKQSV NFVYNCAVMS C
101: SLRSLIRSGE IYRLRRLQGT LEHWVYFSCH LNEWEAFDPR SKRWMHLPSM PQNECFRYAD KESLAVGTDL LVFGWEVSSY VIYRYSLLTN SWSTAKSMNM
201: PRCLFGSASY GEIAVLAGGC DSSGRILDTA ELYNYEDQTW LVLPGMNKRR KMCSGVFMDG KFYVIGGIGV GEENEPKVLT CGEEFDLKTR KWTEIPEMSP
301: PRSNQGNGMS AAAMAPPLVA VVNDQLYAAD HAGMAVRRYD KEKRVWNKVG NLPEQAGSMN GWGLAFRACG DRIIVIGGPK APGEGFIELN SWVPSVTTPE
401: WHLLGKKQSV NFVYNCAVMS C
Arabidopsis Description
F-box/kelch-repeat protein At1g26930 [Source:UniProtKB/Swiss-Prot;Acc:Q84M94]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.