CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052253_P001	Maize	cytosol	94.35	94.8
Os02t0748300-01	Rice	cytosol	89.41	89.2
TraesCS6B01G334300.1	Wheat	cytosol, nucleus, plastid	87.53	87.53
HORVU6Hr1G075590.1	Barley	cytosol, nucleus, plastid	87.29	87.29
TraesCS6D01G285100.1	Wheat	cytosol, nucleus, plastid	87.29	87.29
TraesCS6A01G306000.1	Wheat	cytosol	87.29	87.29
GSMUA_Achr7P20970_001	Banana	cytosol	64.0	68.86
GSMUA_Achr4P09990_001	Banana	cytosol	68.71	68.07
GSMUA_Achr4P00520_001	Banana	cytosol	62.12	67.87
KXG40080	Sorghum	cytosol	60.94	60.51
VIT_17s0000g05920.t01	Wine grape	cytosol	62.82	60.27
CDY33755	Canola	cytosol	17.18	59.35
Solyc04g005670.1.1	Tomato	cytosol	56.24	59.16
PGSC0003DMT400007346	Potato	nucleus	59.53	58.43
KRH54527	Soybean	cytosol	59.53	57.37
Bra026838.1-P	Field mustard	nucleus	54.35	56.76
OQU91835	Sorghum	cytosol, nucleus, plastid	59.06	56.53
CDX81631	Canola	nucleus	54.35	56.48
KRH63378	Soybean	cytosol	58.59	56.46
KXG27134	Sorghum	cytosol	35.29	55.76
Solyc03g113010.1.1	Tomato	cytosol	57.65	55.56
CDY62015	Canola	nucleus	54.12	55.42
AT1G14330.1	Thale cress	nucleus	57.41	55.33
CDY60836	Canola	cytosol	48.94	54.74
CDY49094	Canola	nucleus	54.35	54.48
PGSC0003DMT400046591	Potato	extracellular	57.88	53.95
Bra026575.1-P	Field mustard	nucleus	56.24	53.83
CDY62176	Canola	nucleus	56.47	53.69
CDY09349	Canola	nucleus	56.0	53.6
CDY17425	Canola	cytosol	50.35	53.37
Bra017407.1-P	Field mustard	nucleus, plastid	55.06	53.3
KRH03453	Soybean	cytosol	51.06	53.19
CDY03028	Canola	cytosol	55.29	52.34
CDY45190	Canola	nucleus	55.53	52.1
AT2G02870.1	Thale cress	nucleus	57.18	52.03
AT1G26930.1	Thale cress	cytosol	51.53	52.02
Bra024801.1-P	Field mustard	nucleus	55.29	51.88
Solyc04g005870.1.1	Tomato	cytosol	6.35	50.94
OQU83795	Sorghum	cytosol	53.41	50.9
CDY33754	Canola	nucleus	29.88	50.8
CDY46430	Canola	cytosol	50.82	50.7
CDY52764	Canola	cytosol	50.59	50.59
Bra016297.1-P	Field mustard	cytosol	50.59	50.47
CDY16205	Canola	nucleus	49.41	49.65
PGSC0003DMT400059324	Potato	cytosol	55.53	49.17
VIT_01s0026g02080.t01	Wine grape	nucleus	62.35	48.98
KRH56929	Soybean	cytosol	46.35	48.4
KRH45883	Soybean	cytosol	59.53	46.94
KRG99114	Soybean	cytosol	59.29	46.75
KRH70694	Soybean	cytosol	58.12	45.83
KRH74828	Soybean	cytosol	57.88	45.81
PGSC0003DMT400091785	Potato	cytosol, mitochondrion, plastid	16.0	43.04
OQU82347	Sorghum	mitochondrion	47.53	42.8
PGSC0003DMT400007391	Potato	cytosol	11.53	36.57
Solyc05g007220.2.1	Tomato	nucleus	54.12	35.71
OQU82118	Sorghum	cytosol	18.35	22.41
EER91632	Sorghum	plastid	20.47	19.91
OQU81371	Sorghum	mitochondrion	17.65	19.89
EES06854	Sorghum	cytosol	17.65	19.58
EER95442	Sorghum	mitochondrion	19.53	18.95
EES06149	Sorghum	cytosol	15.29	18.79
EER97991	Sorghum	mitochondrion	18.12	18.6
KXG29748	Sorghum	plastid	18.59	18.16
EES05304	Sorghum	cytosol, peroxisome, plastid	19.53	18.08
KXG24326	Sorghum	cytosol	19.06	17.31
EER90147	Sorghum	cytosol	14.35	15.52

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	UniProt:A0A194YRD8	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	EnsemblPlants:KXG30756	ProteinID:KXG30756	ProteinID:KXG30756.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
PFAM:PF01344	PANTHER:PTHR24413	PANTHER:PTHR24413:SF133	SMART:SM00612	EnsemblPlantsGene:SORBI_3004G236600	SUPFAM:SSF117281
UniParc:UPI0001C80D16	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:58461003..58463119

Molecular Weight (calculated)

47043.9 Da

IEP (calculated)

6.014

GRAVY (calculated)

-0.288

Length

425 amino acids

Sequence
(BLAST)

001: MLEGQSWLIS RSLPSSCEQE SRLAYMTYHL LEITRSKRPP GTLSIEHDVA AVAALTKRIK SAEDQNGEAL DCQGSNDQGD SDSSTLISSI GRDNSINCLA
101: RCSRSDYGSI ASLNRSFRSV VRSGELYKER RQLGISEHWV YFSCNVQEWE AYDPYRSRWM TLPRMPHNEC FMCSDKESLA VGTELLVFGK EIQTHIILSY
201: SILTNSWSRG VEMNAPRCLF GSASFGEKAI IAGGFGADGR VLRSVELYNS ETKRWITLPS MNKARRMCSG VFMDGKFYVI GGMASDTEVL TCGEEYDLDR
301: GTWRVIENMS EGLNGASGAP PLVAVVENEL YAAQYAGKLV RKYNKTDNSW TTLGELPERP EAVNGWGIAF RGCGERLLVI GGPRVLGGGM IELHSWIPSE
401: GPLQWNMIGS KPSGNFVYNC AVMGC

Best Arabidopsis Sequence Match ( AT1G14330.1 )
(BLAST)

001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C

Arabidopsis Description

At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.