CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g069320.1.1	Tomato	plastid	53.53	66.06
OQU82347	Sorghum	mitochondrion	97.77	55.72
Zm00001d026321_P001	Maize	cytosol	92.57	55.58
VIT_16s0039g01470.t01	Wine grape	cytosol	77.7	54.43
TraesCS2D01G463000.1	Wheat	cytosol	88.85	53.47
TraesCS2A01G462600.1	Wheat	cytosol	88.85	53.23
TraesCS2B01G484200.1	Wheat	cytosol	88.48	53.01
HORVU2Hr1G103880.2	Barley	cytosol	87.73	52.91
Os04t0619300-01	Rice	cytosol, extracellular	92.19	52.1
GSMUA_Achr3P23350_001	Banana	cytosol, extracellular	74.72	49.88
KRH29930	Soybean	cytosol	62.83	48.7
KRH26429	Soybean	cytosol	64.68	47.8
GSMUA_Achr9P30470_001	Banana	cytosol	67.29	46.29
KRH22905	Soybean	cytosol	65.06	44.99
PGSC0003DMT400020936	Potato	cytosol	63.2	43.81
AT5G60570.2	Thale cress	cytosol	63.2	43.26
Bra002471.1-P	Field mustard	cytosol	60.22	43.2
CDY31534	Canola	cytosol	60.22	43.2
KRH24879	Soybean	cytosol	63.2	42.82
CDX80156	Canola	cytosol	60.22	42.74
KRH12864	Soybean	cytosol, plasma membrane	48.33	40.0
GSMUA_Achr11P...	Banana	cytosol	64.31	39.32
KXG30756	Sorghum	cytosol	55.76	35.29
KXG40080	Sorghum	cytosol	52.42	32.94
OQU91835	Sorghum	cytosol, nucleus, plastid	53.16	32.21
OQU83795	Sorghum	cytosol	52.42	31.61
OQU82118	Sorghum	cytosol	20.82	16.09
EES06854	Sorghum	cytosol	20.45	14.36
OQU81371	Sorghum	mitochondrion	19.7	14.06
EER91632	Sorghum	plastid	21.93	13.5
KXG24326	Sorghum	cytosol	23.42	13.46
EES06149	Sorghum	cytosol	17.1	13.29
EER97991	Sorghum	mitochondrion	20.45	13.29
EER95442	Sorghum	mitochondrion	20.45	12.56
KXG29748	Sorghum	plastid	19.7	12.18
EES05304	Sorghum	cytosol, peroxisome, plastid	20.07	11.76
EER90147	Sorghum	cytosol	16.73	11.45

Protein Annotations

EnsemblPlants:KXG27134	EnsemblPlantsGene:SORBI_3006G218400	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413	PANTHER:PTHR24413:SF150	PFAM:PF01344
ProteinID:KXG27134	ProteinID:KXG27134.1	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI00081AC220	UniProt:A0A1B6PN81
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:56564813..56567621

Molecular Weight (calculated)

29704.6 Da

IEP (calculated)

5.771

GRAVY (calculated)

-0.134

Length

269 amino acids

Sequence
(BLAST)

001: MRLPRMPWDE CFSCADKELL AVGTQLLVFG REYTSLAIWM YNLPTRSWSP CTPMNLPRCL FASGSSGEIA IVAGGCDKNG QVLRSVELYN SEIGHWETIP
101: DMNLPRRLSS GFFMDGKFYV IGGVSSQRDS LTCGEEYNLE TRTWRRILDM YPGGTSASQS PPLVAVVNNQ LYAADQSTNV VKKYDKVNNA WNIVKPLPVR
201: ADSSNGWGLA FKACGDMLLV IGGHRGPRGE VILLHSWCPE GGEDGADWEV LSVKERAGVF VYNCAIMGC

Best Arabidopsis Sequence Match ( AT5G60570.2 )
(BLAST)

001: MAAEEHSNKR REVSASASAS ASASVVVNLR VGEEDNDGHR LRLGSSDSVL PGLIDDVALN CLAWVPRSDY PSLSCVNKKY NKLINSGHLF ALRKELGIVE
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC

Arabidopsis Description

F-box/kelch-repeat protein At5g60570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.