Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400020936 | Potato | cytosol | 96.79 | 54.38 |
| KXG27134 | Sorghum | cytosol | 66.06 | 53.53 |
| VIT_06s0004g02980.t01 | Wine grape | cytosol | 87.61 | 52.47 |
| KRH29930 | Soybean | cytosol | 79.36 | 49.86 |
| KRH26429 | Soybean | cytosol | 80.28 | 48.08 |
| Solyc04g005870.1.1 | Tomato | cytosol | 11.47 | 47.17 |
| KRH22905 | Soybean | cytosol | 81.65 | 45.76 |
| KRH24879 | Soybean | cytosol | 79.82 | 43.83 |
| Bra002471.1-P | Field mustard | cytosol | 74.31 | 43.2 |
| CDY31534 | Canola | cytosol | 74.31 | 43.2 |
| CDX80156 | Canola | cytosol | 74.31 | 42.74 |
| AT5G60570.2 | Thale cress | cytosol | 76.15 | 42.24 |
| KRH12864 | Soybean | cytosol, plasma membrane | 57.8 | 38.77 |
| GSMUA_Achr3P23350_001 | Banana | cytosol, extracellular | 61.93 | 33.5 |
| Zm00001d007538_P001 | Maize | cytosol | 44.95 | 33.0 |
| TraesCS2D01G463000.1 | Wheat | cytosol | 66.06 | 32.21 |
| Zm00001d026321_P001 | Maize | cytosol | 66.06 | 32.14 |
| TraesCS2A01G462600.1 | Wheat | cytosol | 65.6 | 31.85 |
| TraesCS2B01G484200.1 | Wheat | cytosol | 65.14 | 31.63 |
| HORVU2Hr1G103880.2 | Barley | cytosol | 64.68 | 31.61 |
| Solyc04g005670.1.1 | Tomato | cytosol | 57.34 | 30.94 |
| Os04t0619300-01 | Rice | cytosol, extracellular | 67.43 | 30.88 |
| GSMUA_Achr9P30470_001 | Banana | cytosol | 54.59 | 30.43 |
| OQU82347 | Sorghum | mitochondrion | 65.6 | 30.3 |
| Zm00001d002284_P003 | Maize | mitochondrion | 66.97 | 29.92 |
| Solyc03g113010.1.1 | Tomato | cytosol | 55.5 | 27.44 |
| GSMUA_Achr11P... | Banana | cytosol | 52.75 | 26.14 |
| Zm00001d019862_P001 | Maize | cytosol | 65.14 | 20.76 |
| Solyc07g009410.2.1 | Tomato | cytosol | 40.83 | 19.96 |
| Solyc05g007220.2.1 | Tomato | nucleus | 53.21 | 18.01 |
| Solyc07g042950.1.1 | Tomato | cytosol | 12.39 | 15.17 |
| Solyc02g021600.1.1 | Tomato | cytosol, mitochondrion, peroxisome, plastid | 21.1 | 11.44 |
| Solyc06g008690.1.1 | Tomato | cytosol | 17.89 | 11.3 |
| Solyc01g005970.2.1 | Tomato | cytosol | 21.56 | 10.76 |
| Solyc01g104980.2.1 | Tomato | cytosol, plastid | 23.39 | 10.74 |
| Solyc09g065400.1.1 | Tomato | cytosol | 16.97 | 10.72 |
| Solyc01g022740.2.1 | Tomato | cytosol | 21.1 | 10.53 |
| Solyc07g042960.1.1 | Tomato | cytosol, mitochondrion | 6.88 | 8.52 |
| Solyc01g094520.2.1 | Tomato | nucleus | 15.14 | 8.27 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019005 | GO:GO:0019538 | GO:GO:0030162 |
| GO:GO:0031625 | GO:GO:0042787 | GO:GO:0043161 | InterPro:IPR015915 | UniProt:K4DA88 | InterPro:Kelch-typ_b-propeller |
| InterPro:Kelch_1 | PFAM:PF01344 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF169 | SMART:SM00612 | SUPFAM:SSF117281 |
| EnsemblPlantsGene:Solyc11g069320.1 | EnsemblPlants:Solyc11g069320.1.1 | UniParc:UPI000276A938 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr11:+:53931457..53932113
Molecular Weight (calculated)
23822.6 Da
IEP (calculated)
8.269
GRAVY (calculated)
-0.216
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MNHRRCLFGS GSLGSISIVA GGSDKNGNVL KSAELYDSLT GTWEILPNMH SPRRLCSGFF MDGKFYVIGG MTNPTDSLTC GEEFDLQTRK WRKIEGMYPN
101: VNRAAQAPPL VAVVNNQLYA VEYLTNMVKK YDKKNNSWEV LGRLPVRADS SNGWGLAFKA CGEELLVVGG NRGPEGEAII LSSWAPKSGC KDGTLDWKVI
201: GLKEHSGVFV YNCAVMGC
101: VNRAAQAPPL VAVVNNQLYA VEYLTNMVKK YDKKNNSWEV LGRLPVRADS SNGWGLAFKA CGEELLVVGG NRGPEGEAII LSSWAPKSGC KDGTLDWKVI
201: GLKEHSGVFV YNCAVMGC
001: MAAEEHSNKR REVSASASAS ASASVVVNLR VGEEDNDGHR LRLGSSDSVL PGLIDDVALN CLAWVPRSDY PSLSCVNKKY NKLINSGHLF ALRKELGIVE
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC
Arabidopsis Description
F-box/kelch-repeat protein At5g60570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.