Factsheet for GSMUA_Achr11P14470_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P30470_001	Banana	cytosol	67.95	76.47
GSMUA_Achr3P23350_001	Banana	cytosol, extracellular	70.0	76.43
VIT_16s0039g01470.t01	Wine grape	cytosol	56.82	65.1
KXG27134	Sorghum	cytosol	39.32	64.31
TraesCS2A01G462600.1	Wheat	cytosol	58.64	57.46
TraesCS2D01G463000.1	Wheat	cytosol	57.73	56.82
HORVU2Hr1G103880.2	Barley	cytosol	57.5	56.73
TraesCS2B01G484200.1	Wheat	cytosol	57.73	56.57
Os04t0619300-01	Rice	cytosol, extracellular	60.23	55.67
Zm00001d026321_P001	Maize	cytosol	56.59	55.58
OQU82347	Sorghum	mitochondrion	59.32	55.3
Zm00001d002284_P003	Maize	mitochondrion	59.32	53.48
KRH26429	Soybean	cytosol	43.86	53.02
Solyc11g069320.1.1	Tomato	plastid	26.14	52.75
PGSC0003DMT400020936	Potato	cytosol	45.91	52.06
KRH22905	Soybean	cytosol	43.64	49.36
KRH24879	Soybean	cytosol	44.32	49.12
KRH29930	Soybean	cytosol	38.41	48.7
Zm00001d007538_P001	Maize	cytosol	31.14	46.13
CDX80156	Canola	cytosol	39.55	45.91
Bra002471.1-P	Field mustard	cytosol	39.09	45.87
CDY31534	Canola	cytosol	39.09	45.87
AT5G60570.2	Thale cress	cytosol	40.45	45.29
KRH12864	Soybean	cytosol, plasma membrane	32.27	43.69
GSMUA_Achr7P20970_001	Banana	cytosol	38.41	42.78
GSMUA_Achr4P00520_001	Banana	cytosol	36.82	41.65
GSMUA_Achr8P01380_001	Banana	cytosol	35.91	41.58
GSMUA_Achr4P09990_001	Banana	cytosol	39.77	40.79
GSMUA_Achr1P21630_001	Banana	cytosol	33.86	39.52
GSMUA_Achr10P...	Banana	nucleus	37.27	37.7
GSMUA_Achr8P17960_001	Banana	nucleus	34.55	36.54
Zm00001d019862_P001	Maize	cytosol	54.55	35.09
GSMUA_Achr2P14920_001	Banana	mitochondrion	37.5	34.52
GSMUA_Achr3P01570_001	Banana	golgi	36.82	33.13
GSMUA_Achr4P24130_001	Banana	nucleus	36.59	31.14
GSMUA_Achr7P08330_001	Banana	cytosol	17.5	19.54
GSMUA_Achr7P27010_001	Banana	cytosol	17.27	18.27
GSMUA_Achr6P04050_001	Banana	cytosol	18.86	18.24
GSMUA_Achr6P24370_001	Banana	cytosol	14.32	18.16
GSMUA_Achr8P28270_001	Banana	cytosol	15.68	17.97
GSMUA_Achr3P29560_001	Banana	cytosol	16.59	17.76
GSMUA_Achr2P17100_001	Banana	cytosol, plastid	16.36	17.65
GSMUA_AchrUn_...	Banana	cytosol	13.86	17.09
GSMUA_Achr3P16120_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	14.77	17.02
GSMUA_Achr2P22090_001	Banana	cytosol	13.86	16.18
GSMUA_Achr4P20790_001	Banana	extracellular	13.86	16.18
GSMUA_Achr6P20750_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	14.09	15.9
GSMUA_Achr6P31190_001	Banana	mitochondrion	14.32	15.33
GSMUA_Achr2P18470_001	Banana	cytosol	14.77	15.26
GSMUA_Achr10P...	Banana	cytosol	17.95	15.19
GSMUA_Achr4P03630_001	Banana	plasma membrane	15.0	7.77

Protein Annotations

EnsemblPlants:GSMUA_Achr11P14470_001	EnsemblPlants:GSMUA_Achr11T14470_001	EnsemblPlantsGene:GSMUA_Achr11G14470_001	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413	PANTHER:PTHR24413:SF150
PFAM:PF01344	SEG:seg	SUPFAM:SSF117281	UniParc:UPI000296CACE	UniProt:M0RS77	MapMan:35.1

Description

F-box/kelch-repeat protein At5g60570 [Source:GMGC_GENE;Acc:GSMUA_Achr11G14470_001]

Coordinates

chr11:+:15591971..15596358

Molecular Weight (calculated)

49745.8 Da

IEP (calculated)

8.298

GRAVY (calculated)

-0.283

Length

440 amino acids

Sequence
(BLAST)

001: MTITLITQVI KLQPNHDDNH MDNCITTDYF ELIVLGAYRE IELQHSKPEI MVVAPHCYLS QLFRSFDQEC DSSQKYLIGY LVLAKTGKLA KVKRDTFDTD
101: FVVDNGYHRG LKKKRSVVKT QPGGSYTDRR SNDCLLPGLH DDIALDCLAL TCRSEYPSLA CLNKRFNSLI RSGYLYKLRR QLGVIEHWVY LACSLMPWEA
201: FDPFRRRWMR LPRMPCDDCF SCADKESLAV GTQLLVFGRE VIGFAIWMYS LVRHDWSRCP PMKLHRCLFG SGSSGHIAII AGGSDMAGHV LRGMSNHTDP
301: LTCGEEYNIE SRTWRRIRNM YPGGNRATQS PPLVAVVNNQ LYAADQSTNE VKKYDKSNNT WNVVRSLPVR ADSSNGWGLA FRSCGDKLLV VGGHRGPQGE
401: VIVLHVWRPE DGNTGGAEWD VLSIRERAGA FVYNCAVMGC

Best Arabidopsis Sequence Match ( AT5G60570.2 )
(BLAST)

001: MAAEEHSNKR REVSASASAS ASASVVVNLR VGEEDNDGHR LRLGSSDSVL PGLIDDVALN CLAWVPRSDY PSLSCVNKKY NKLINSGHLF ALRKELGIVE
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC

Arabidopsis Description

F-box/kelch-repeat protein At5g60570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.