Factsheet for GSMUA_Achr9P30470_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P23350_001	Banana	cytosol, extracellular	74.94	72.7
GSMUA_Achr11P...	Banana	cytosol	76.47	67.95
KXG27134	Sorghum	cytosol	46.29	67.29
VIT_16s0039g01470.t01	Wine grape	cytosol	63.94	65.1
TraesCS2A01G462600.1	Wheat	cytosol	67.52	58.8
TraesCS2D01G463000.1	Wheat	cytosol	66.5	58.17
TraesCS2B01G484200.1	Wheat	cytosol	65.73	57.24
Zm00001d026321_P001	Maize	cytosol	65.47	57.14
OQU82347	Sorghum	mitochondrion	68.54	56.78
HORVU2Hr1G103880.2	Barley	cytosol	64.71	56.73
Os04t0619300-01	Rice	cytosol, extracellular	68.29	56.09
KRH26429	Soybean	cytosol	51.66	55.49
Solyc11g069320.1.1	Tomato	plastid	30.43	54.59
Zm00001d002284_P003	Maize	mitochondrion	67.52	54.1
KRH22905	Soybean	cytosol	52.69	52.96
PGSC0003DMT400020936	Potato	cytosol	51.15	51.55
KRH24879	Soybean	cytosol	51.66	50.88
KRH29930	Soybean	cytosol	45.01	50.72
Zm00001d007538_P001	Maize	cytosol	37.34	49.16
CDX80156	Canola	cytosol	46.55	48.02
Bra002471.1-P	Field mustard	cytosol	45.78	47.73
CDY31534	Canola	cytosol	45.78	47.73
AT5G60570.2	Thale cress	cytosol	47.06	46.82
KRH12864	Soybean	cytosol, plasma membrane	38.62	46.46
GSMUA_Achr7P20970_001	Banana	cytosol	41.94	41.52
GSMUA_Achr8P01380_001	Banana	cytosol	39.9	41.05
GSMUA_Achr4P00520_001	Banana	cytosol	39.9	40.1
GSMUA_Achr4P09990_001	Banana	cytosol	43.48	39.63
GSMUA_Achr1P21630_001	Banana	cytosol	37.6	38.99
GSMUA_Achr10P...	Banana	nucleus	41.43	37.24
Zm00001d019862_P001	Maize	cytosol	62.92	35.96
GSMUA_Achr8P17960_001	Banana	nucleus	37.85	35.58
GSMUA_Achr2P14920_001	Banana	mitochondrion	39.39	32.22
GSMUA_Achr3P01570_001	Banana	golgi	39.39	31.49
GSMUA_Achr4P24130_001	Banana	nucleus	37.85	28.63
GSMUA_Achr7P08330_001	Banana	cytosol	19.18	19.04
GSMUA_Achr6P24370_001	Banana	cytosol	16.37	18.44
GSMUA_Achr7P27010_001	Banana	cytosol	19.44	18.27
GSMUA_Achr3P29560_001	Banana	cytosol	19.18	18.25
GSMUA_Achr2P17100_001	Banana	cytosol, plastid	18.67	17.89
GSMUA_Achr6P04050_001	Banana	cytosol	20.46	17.58
GSMUA_Achr8P28270_001	Banana	cytosol	17.14	17.45
GSMUA_AchrUn_...	Banana	cytosol	15.35	16.81
GSMUA_Achr3P16120_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	16.11	16.49
GSMUA_Achr6P20750_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	15.6	15.64
GSMUA_Achr2P18470_001	Banana	cytosol	16.88	15.49
GSMUA_Achr6P31190_001	Banana	mitochondrion	16.11	15.33
GSMUA_Achr2P22090_001	Banana	cytosol	14.58	15.12
GSMUA_Achr4P20790_001	Banana	extracellular	14.32	14.85
GSMUA_Achr10P...	Banana	cytosol	19.44	14.62
GSMUA_Achr4P03630_001	Banana	plasma membrane	18.67	8.6

Protein Annotations

EnsemblPlants:GSMUA_Achr9P30470_001	EnsemblPlants:GSMUA_Achr9T30470_001	EnsemblPlantsGene:GSMUA_Achr9G30470_001	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413	PANTHER:PTHR24413:SF150
PFAM:PF01344	SEG:seg	SUPFAM:SSF117281	UniParc:UPI000295D4C0	UniProt:M0U4V4	MapMan:35.1

Description

F-box/kelch-repeat protein At5g60570 [Source:GMGC_GENE;Acc:GSMUA_Achr9G30470_001]

Coordinates

chr9:-:33717877..33719166

Molecular Weight (calculated)

44246.4 Da

IEP (calculated)

8.058

GRAVY (calculated)

-0.124

Length

391 amino acids

Sequence
(BLAST)

001: MVGSTGCVLS QLFRSFDQDH CSFQRYLWTY LLLVKNGSLF EVLNEVIFDK DLNLLNLDLT DLTRRRPVYK RQPAGNYSVQ KSNGCLLPGL VDDVALVCLA
101: LSCRSDYPSL ACVNKRFNWL IRSGYLYKLR RQLGVREHWV YLACSLMPWE AFDPVRQRWM RLPRMPCDEC FSYADKESLA VGTQLLVFGR ELTGFAIWMY
201: NLVTCDWSRC PMMSLPRCLF GSSSSGEIAI VAGGSDMAGH VLKCVEFHTD SLTCGEEFNL KTRTWRRIRN MYPGGNRATQ SPPLVAVVNN QLYAADQSTN
301: EVKKYDKENN TWNVVRPLPV RADSSNGWGL AFKACGDKLL VVGGHRGPQG EVIVLHYWCP EEGNMAGADW DILSIRERAG AFVYNCAIMG C

Best Arabidopsis Sequence Match ( AT5G60570.2 )
(BLAST)

001: MAAEEHSNKR REVSASASAS ASASVVVNLR VGEEDNDGHR LRLGSSDSVL PGLIDDVALN CLAWVPRSDY PSLSCVNKKY NKLINSGHLF ALRKELGIVE
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC

Arabidopsis Description

F-box/kelch-repeat protein At5g60570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.