Factsheet for GSMUA_Achr2P22090_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01301	Canola	cytosol	19.63	47.13
CDY30645	Canola	nucleus	27.59	46.64
CDY04697	Canola	cytosol	27.06	45.74
Bra031360.1-P	Field mustard	plastid	27.59	42.62
VIT_18s0001g04730.t01	Wine grape	cytosol, plastid	48.54	38.36
GSMUA_Achr6P04050_001	Banana	cytosol	45.89	38.02
VIT_12s0055g00910.t01	Wine grape	cytosol	46.95	36.95
Os10t0363600-01	Rice	cytosol, plastid	44.03	34.95
KRH42190	Soybean	cytosol, plastid	44.3	34.72
KRH58301	Soybean	cytosol	44.3	34.72
KXG24326	Sorghum	cytosol	42.97	34.62
AT1G22040.1	Thale cress	plastid	42.97	34.11
TraesCS4A01G472100.1	Wheat	cytosol	41.38	34.06
Zm00001d049632_P001	Maize	cytosol	42.71	33.61
TraesCS7D01G016400.1	Wheat	cytosol, plastid	40.58	33.55
TraesCS7A01G020100.1	Wheat	cytosol, plastid	40.32	33.33
Solyc01g104980.2.1	Tomato	cytosol, plastid	41.11	32.63
KRH18847	Soybean	cytosol	41.11	32.63
GSMUA_Achr10P...	Banana	cytosol	44.83	32.5
HORVU7Hr1G002140.2	Barley	mitochondrion	41.11	32.49
PGSC0003DMT400032733	Potato	cytosol, plastid	40.85	32.42
KRH53131	Soybean	cytosol	40.58	32.14
KRH16647	Soybean	cytosol, plastid	40.58	32.08
Bra012304.1-P	Field mustard	cytosol	38.99	31.48
KRH55297	Soybean	cytosol	22.81	29.35
GSMUA_Achr3P29560_001	Banana	cytosol	23.87	21.9
KRH62415	Soybean	cytosol	15.92	21.74
GSMUA_Achr7P27010_001	Banana	cytosol	23.61	21.39
CDY00415	Canola	mitochondrion	11.94	21.03
GSMUA_Achr2P17100_001	Banana	cytosol, plastid	21.75	20.1
GSMUA_Achr7P08330_001	Banana	cytosol	20.95	20.05
GSMUA_Achr6P24370_001	Banana	cytosol	18.04	19.6
CDY01300	Canola	cytosol	11.14	18.75
GSMUA_Achr4P20790_001	Banana	extracellular	18.57	18.57
GSMUA_Achr8P28270_001	Banana	cytosol	17.77	17.45
GSMUA_Achr8P01380_001	Banana	cytosol	16.98	16.84
GSMUA_Achr3P16120_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	16.98	16.75
GSMUA_Achr6P31190_001	Banana	mitochondrion	17.77	16.3
GSMUA_AchrUn_...	Banana	cytosol	15.38	16.25
GSMUA_Achr6P20750_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	15.92	15.38
GSMUA_Achr1P21630_001	Banana	cytosol	14.85	14.85
GSMUA_Achr7P20970_001	Banana	cytosol	15.38	14.68
GSMUA_Achr3P23350_001	Banana	cytosol, extracellular	15.65	14.64
GSMUA_Achr9P30470_001	Banana	cytosol	15.12	14.58
KRH72270	Soybean	cytosol	5.04	14.5
GSMUA_Achr10P...	Banana	nucleus	16.45	14.25
GSMUA_Achr4P09990_001	Banana	cytosol	15.92	13.99
GSMUA_Achr4P00520_001	Banana	cytosol	14.32	13.88
GSMUA_Achr11P...	Banana	cytosol	16.18	13.86
GSMUA_Achr3P01570_001	Banana	golgi	17.51	13.5
GSMUA_Achr8P17960_001	Banana	nucleus	14.85	13.46
GSMUA_Achr2P14920_001	Banana	mitochondrion	16.18	12.76
GSMUA_Achr2P18470_001	Banana	cytosol	14.06	12.44
GSMUA_Achr4P24130_001	Banana	nucleus	16.18	11.8
GSMUA_Achr4P03630_001	Banana	plasma membrane	21.75	9.66

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr2G22090_001	EnsemblPlants:GSMUA_Achr2P22090_001	EnsemblPlants:GSMUA_Achr2T22090_001	InterPro:IPR001810	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	UniProt:M0SA50	PFAM:PF00646	PFAM:PF01344	PFscan:PS50181
PANTHER:PTHR24414	PANTHER:PTHR24414:SF45	SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383
UniParc:UPI00029681A4	SEG:seg	:	:	:	:

Description

Putative F-box/kelch-repeat protein At1g22040 [Source:GMGC_GENE;Acc:GSMUA_Achr2G22090_001]

Coordinates

chr2:-:21288980..21293217

Molecular Weight (calculated)

42480.2 Da

IEP (calculated)

9.915

GRAVY (calculated)

-0.293

Length

377 amino acids

Sequence
(BLAST)

001: MKPWLGFRRS SMQDSLDDCN CWFSERVVEA FGPKEKRPMG SFLSLPHSKA RLLQHRKSFE LEDCKRLRMS ANYGSGNTRL IPCLPDEISL EILARVPRIC
101: YLNMKMVSRR WRAALSGAEV YQLRKELGRT EEWVYILTKV EDGKLAWHAL DPRSGRWQRL PAMPNTQRGS LGLWPRILMD PSTKFADMVR SWLGTTDTSI
201: NMPFYGCGVG TVDGCLYVLG GLSSSSAIKS VWRYDPCANS WQESSPMTIG RAFCKTSVLD DKLYVVGGIT RGKKGLTSLR VPVHNWSNFG APYLLVTLLG
301: KLHVIAKEFN NETRVLRADP KHSCSSYSTW SSSSSAATIF SSRNPDKSPE TERNLWEVIA AKNFGTAQFV ACRVLAI

Best Arabidopsis Sequence Match ( AT1G22040.1 )
(BLAST)

001: MGSVMSLSCS KRKATSQDVE CSSESRKRRK ISSENDEEEC CRLIPSLPDE LSIQILARLP RICYSSVRLV SRRWRSAVST SEVYSLRKEL GRTEEWLYVL
101: TKGHEDKLLW YALDPVSTKW QRLPPMPVVV YEEESRKSLS GLWNMITPSF NVGAIVRSFL GRRDSSEQMP FCGCAIGAVD GGLYVIGGLS RSKTVSCVWR
201: FDPILNSWSE VSSMLASRAY SKTGVLNKKL YVVGGVDRGR GGLSPLQSAE VYDPSTDAWS EVPSMPFSKA QVLPNAFLAD LLKPIATGMT CYNGRLCVPQ
301: SLYSWPFFVD VGGEVYDPET NLWVEMPSGM GEGWPARQAG TKLSVVVDGE LYAFDPSSSM ENGKIKVYDQ KEDTWKVVIG EVPVYDLTDS ESPYLLAGFH
401: GKLHFITRDP NHNVTVLRAD VPNIPVSSSS SSSSSVSIPH LKTNAPNKSD TVTWKLIATK DFGAAELVSC QVIDI

Arabidopsis Description

F-box/kelch-repeat protein At1g22040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM55]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.