CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 3
plastid 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18847	Soybean	cytosol	92.24	92.63
KRH53131	Soybean	cytosol	77.15	77.31
KRH55297	Soybean	cytosol	46.75	76.11
KRH62415	Soybean	cytosol	43.82	75.72
VIT_18s0001g04730.t01	Wine grape	cytosol, plastid	71.28	71.28
KRH72270	Soybean	cytosol	17.19	62.6
AT1G22040.1	Thale cress	plastid	61.22	61.47
CDY01300	Canola	cytosol	27.88	59.38
GSMUA_Achr6P04050_001	Banana	cytosol	56.39	59.12
KRH42190	Soybean	cytosol, plastid	59.54	59.04
CDY00415	Canola	mitochondrion	26.42	58.88
KRH58301	Soybean	cytosol	58.7	58.21
TraesCS7D01G016400.1	Wheat	cytosol, plastid	54.51	57.02
Os10t0363600-01	Rice	cytosol, plastid	55.97	56.21
TraesCS4A01G472100.1	Wheat	cytosol	53.88	56.11
TraesCS6B01G227500.1	Wheat	cytosol, peroxisome, plastid	54.09	56.09
KXG24326	Sorghum	cytosol	54.93	55.98
TraesCS7A01G020100.1	Wheat	cytosol, plastid	53.25	55.7
HORVU6Hr1G052010.1	Barley	cytosol	53.04	55.0
Bra012304.1-P	Field mustard	cytosol	53.46	54.6
Os02t0574900-01	Rice	cytosol	52.62	54.57
EES05304	Sorghum	cytosol, peroxisome, plastid	52.41	54.47
Zm00001d050862_P001	Maize	cytosol, peroxisome, plastid	51.99	54.39
CDY30645	Canola	nucleus	24.95	53.36
HORVU7Hr1G002140.2	Barley	mitochondrion	53.04	53.04
CDY04697	Canola	cytosol	24.32	52.02
Bra031360.1-P	Field mustard	plastid	26.0	50.82
Zm00001d049632_P001	Maize	cytosol	50.73	50.52
GSMUA_Achr10P...	Banana	cytosol	54.72	50.19
CDY01301	Canola	cytosol	15.51	47.13
GSMUA_Achr2P22090_001	Banana	cytosol	32.08	40.58
KRH11716	Soybean	cytosol, golgi, plastid	22.64	29.03
KRG93237	Soybean	cytosol	24.95	27.8
KRH56558	Soybean	cytosol	24.95	27.8
KRG93186	Soybean	cytosol	22.22	26.63
KRH42810	Soybean	cytosol	24.32	26.54
KRH67237	Soybean	cytosol	19.08	26.38
KRH58897	Soybean	cytosol	24.11	26.32
KRG95556	Soybean	cytosol	18.87	26.09
KRH36711	Soybean	cytosol	21.38	25.31
KRH32035	Soybean	cytosol	18.03	25.0
KRH71403	Soybean	cytosol	17.82	24.71
KRH48153	Soybean	cytosol	18.66	24.59
KRH11179	Soybean	mitochondrion, plastid	20.75	24.44
KRH21075	Soybean	mitochondrion	20.75	24.44
KRH42654	Soybean	cytosol	19.5	23.97
KRG97442	Soybean	cytosol, nucleus, peroxisome	18.45	23.78
KRH48156	Soybean	cytosol	18.03	23.76
KRH31463	Soybean	cytosol	18.87	23.38
KRH48154	Soybean	cytosol	18.03	23.37
KRH61941	Soybean	plastid	17.19	23.36
KRH57678	Soybean	cytosol	18.87	22.84
KRH26429	Soybean	cytosol	17.4	22.8
KRH65052	Soybean	cytosol	14.68	21.88
KRH52601	Soybean	extracellular, golgi	18.24	21.8
KRH22905	Soybean	cytosol	17.61	21.59
KRG94518	Soybean	mitochondrion	18.03	21.45
KRH65051	Soybean	cytosol	14.68	21.34
KRH06951	Soybean	cytosol	17.82	21.04
KRH12864	Soybean	cytosol, plasma membrane	14.26	20.92
KRH24879	Soybean	cytosol	17.4	20.91
KRH56929	Soybean	cytosol	16.98	19.9
KRH54527	Soybean	cytosol	18.24	19.73
KRH03453	Soybean	cytosol	16.77	19.61
KRH63378	Soybean	cytosol	18.03	19.5
KRH29930	Soybean	cytosol	14.05	19.31
KRH74828	Soybean	cytosol	18.66	16.57
KRH45883	Soybean	cytosol	18.66	16.51
KRH70694	Soybean	cytosol	18.45	16.33
KRG99114	Soybean	cytosol	18.24	16.14

Protein Annotations

EntrezGene:100815614	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02008967	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_14G167900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1MAQ0	InterPro:IPR001810
InterPro:IPR015915	EnsemblPlants:KRH16647	ProteinID:KRH16647	ProteinID:KRH16647.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
PFAM:PF01344	PFAM:PF12937	PFscan:PS50181	PANTHER:PTHR24414	PANTHER:PTHR24414:SF39	SMART:SM00256
SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI0001CABEEF	SEG:seg	:

Description

hypothetical protein

Coordinates

chr14:-:41644341..41647287

Molecular Weight (calculated)

53498.2 Da

IEP (calculated)

5.366

GRAVY (calculated)

-0.196

Length

477 amino acids

Sequence
(BLAST)

001: MGSLFSMANT KANQSESSAT SPNETSKRQR MSPASVEECP RLIPNIPDEL SLQIIARLPR ICYYHVRLVS RRWKTTITSL ELYKVRKELG TTEEWLYLLV
101: RIGQNKLLWH ALDPRSRIWQ RLPIMPRVVD EEDSQKVSSR LWMWNMVEGI RIAEIIRGLL GQKDVLDDMP FCGCAFGAVD GCLYILGGFS KASTMKCVWR
201: FDPIQNSWKK VNSMSTGRAY CKTGVLNNML YVVGGVSQGQ AGLIPLQSAE VFDPFKDTWS DVPSMPFSRA GVLPTAFLAD MLKPIATGLS SYKGRLYVPQ
301: SLYSWPFFVD VGGEIYDPET NSWMEMPNGM GEGWPIKQAG TKLSVVVNGE LYAFDPSNSV DSGRIKVYDQ GEDAWKVVIG KVPVYDFTEL EYPYLLAGFH
401: GKLHFITKDA NHDISVLQAD LCSNLDSSQS TSTPQSPKSM EDELLQESTE TDEVIWKLVA SKGFGQAELI NCQVIDI

Best Arabidopsis Sequence Match ( AT1G22040.1 )
(BLAST)

001: MGSVMSLSCS KRKATSQDVE CSSESRKRRK ISSENDEEEC CRLIPSLPDE LSIQILARLP RICYSSVRLV SRRWRSAVST SEVYSLRKEL GRTEEWLYVL
101: TKGHEDKLLW YALDPVSTKW QRLPPMPVVV YEEESRKSLS GLWNMITPSF NVGAIVRSFL GRRDSSEQMP FCGCAIGAVD GGLYVIGGLS RSKTVSCVWR
201: FDPILNSWSE VSSMLASRAY SKTGVLNKKL YVVGGVDRGR GGLSPLQSAE VYDPSTDAWS EVPSMPFSKA QVLPNAFLAD LLKPIATGMT CYNGRLCVPQ
301: SLYSWPFFVD VGGEVYDPET NLWVEMPSGM GEGWPARQAG TKLSVVVDGE LYAFDPSSSM ENGKIKVYDQ KEDTWKVVIG EVPVYDLTDS ESPYLLAGFH
401: GKLHFITRDP NHNVTVLRAD VPNIPVSSSS SSSSSVSIPH LKTNAPNKSD TVTWKLIATK DFGAAELVSC QVIDI

Arabidopsis Description

F-box/kelch-repeat protein At1g22040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM55]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.