CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56558	Soybean	cytosol	97.66	97.66
KRG93186	Soybean	cytosol	85.51	91.96
VIT_11s0016g05050.t01	Wine grape	cytosol	91.12	91.12
KRH58897	Soybean	cytosol	74.07	72.54
KRH42810	Soybean	cytosol	74.07	72.54
KRH11716	Soybean	cytosol, golgi, plastid	55.37	63.71
KRH36711	Soybean	cytosol	53.04	56.33
KRH11179	Soybean	mitochondrion, plastid	26.17	27.65
KRH21075	Soybean	mitochondrion	26.17	27.65
KRG97442	Soybean	cytosol, nucleus, peroxisome	23.36	27.03
KRH31463	Soybean	cytosol	24.07	26.75
KRH32035	Soybean	cytosol	21.03	26.16
KRH71403	Soybean	cytosol	21.03	26.16
KRH58301	Soybean	cytosol	29.21	25.99
KRH48153	Soybean	cytosol	21.96	25.97
KRH42654	Soybean	cytosol	23.36	25.77
KRH18847	Soybean	cytosol	28.5	25.68
KRH42190	Soybean	cytosol, plastid	28.74	25.57
KRH48156	Soybean	cytosol	21.5	25.41
KRH16647	Soybean	cytosol, plastid	27.8	24.95
KRH67237	Soybean	cytosol	20.09	24.93
KRG95556	Soybean	cytosol	20.09	24.93
KRH48154	Soybean	cytosol	21.26	24.73
KRH26429	Soybean	cytosol	20.56	24.18
KRH53131	Soybean	cytosol	26.4	23.74
KRH65051	Soybean	cytosol	17.99	23.48
KRH65052	Soybean	cytosol	17.29	23.12
KRH62415	Soybean	cytosol	14.49	22.46
KRH61941	Soybean	plastid	18.22	22.22
KRH24879	Soybean	cytosol	20.56	22.17
KRH22905	Soybean	cytosol	20.09	22.11
KRH72270	Soybean	cytosol	6.54	21.37
KRH29930	Soybean	cytosol	17.29	21.33
KRH12864	Soybean	cytosol, plasma membrane	15.65	20.62
KRH55297	Soybean	cytosol	14.02	20.48
KRH52601	Soybean	extracellular, golgi	18.93	20.3
KRG94518	Soybean	mitochondrion	18.93	20.2
KRH06951	Soybean	cytosol	18.93	20.05
KRH56929	Soybean	cytosol	18.93	19.9
KRH57678	Soybean	cytosol	18.22	19.8
KRH03453	Soybean	cytosol	18.69	19.61
KRH63378	Soybean	cytosol	19.86	19.27
KRH54527	Soybean	cytosol	19.63	19.05
KRH74828	Soybean	cytosol	21.03	16.76
KRH70694	Soybean	cytosol	21.03	16.7
KRH45883	Soybean	cytosol	20.79	16.51
KRG99114	Soybean	cytosol	20.09	15.96

Protein Annotations

EntrezGene:100782411	Gene3D:2.120.10.80	MapMan:9.2.1.1.3	EMBL:ACUP02011545	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_19G005000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031463	UniProt:I1N5I6
InterPro:IPR001810	InterPro:IPR015915	EnsemblPlants:KRG93237	ProteinID:KRG93237	ProteinID:KRG93237.1	InterPro:Kelch-typ_b-propeller
InterPro:Kelch_1	PFAM:PF00646	PFAM:PF01344	PANTHER:PTHR24412	PANTHER:PTHR24412:SF234	SMART:SM00612
SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI000233E8CE	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:456585..460174

Molecular Weight (calculated)

48505.9 Da

IEP (calculated)

9.844

GRAVY (calculated)

-0.267

Length

428 amino acids

Sequence
(BLAST)

001: MDRVIQPPLV DTTACLCRVD TGLKTVAGAK KYVPGTKLCL RPDIKPSIHP TRNKPARGDR SRSQSPLLPG LPDDLAIACL IRVPRVEHRK LRLVCKRWYR
101: LLVGNFFYFL RKSLGIAEEW IYVIKRDRDG KISWHAFDPV YQLWQPLPPV PKEYSGALGF GCAVLNGCHL YLFGGKDPLK GSMRRVIFYS ARTNKWHRAP
201: DMLRRRHFFG SCVINNCLYV AGGENEGVHR SLRSAEVYDP NKNRWSFISD MSTAMVPFIG VVYDGKWFMK GLGSHRQVLS EVYQPENDSW YTIYDGMVSG
301: WRNPSCTLNE KLYALDCKDG CKIRVYDEVA DSWSKHIDSK MHLGSSRALE AAALVPLNGK LCIIRNNMSI SLVDVSKLED LKGSSAEQLW ETIAGKGQFK
401: TLVTNLWSSL AGRNRLKSHI VHCQVLQA

Best Arabidopsis Sequence Match ( AT1G30090.1 )
(BLAST)

001: MQRVRVSSQR AVVHKLGDSQ MTLSPKFRVA ASIQSTLFDR SSELELSLRG EPLIPGLPDD VALNCLLRVP VQSHVSSKSV CKRWHLLFGT KETFFAKRKE
101: FGFKDPWLFV VGFSRCTGKI QWKVLDLRNL TWHEIPAMPC RDKVCPHGFR SVSMPREGTM FVCGGMVSDS DCPLDLVLKY DMVKNHWTVT NKMITARSFF
201: ASGVIDGMIY AAGGNAADLY ELDCAEVLNP LDGNWRPVSN MVAHMASYDT AVLNGKLLVT EGWLWPFFVS PRGQVYDPRT DQWETMSMGL REGWTGTSVV
301: IYDRLFIVSE LERMKMKVYD PVTDSWETIN GPELPEQICR PFAVNCYGNR VYVVGRNLHL AVGNIWQSEN KFAVRWEVVE SPERYADITP SNSQILFA

Arabidopsis Description

F-box/kelch-repeat protein At1g30090 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6Z0]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.