CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48156	Soybean	cytosol	78.18	78.18
KRH48154	Soybean	cytosol	79.28	77.99
KRH65051	Soybean	cytosol	70.44	77.74
KRH65052	Soybean	cytosol	65.47	74.06
VIT_15s0046g02710.t01	Wine grape	cytosol	64.64	65.18
VIT_15s0046g02790.t01	Wine grape	cytosol	47.24	61.96
PGSC0003DMT400000478	Potato	nucleus	57.18	51.88
Solyc01g094520.2.1	Tomato	nucleus	56.63	51.38
AT3G61350.2	Thale cress	cytosol	49.17	49.72
CDY58793	Canola	cytosol	48.34	48.75
Bra003447.1-P	Field mustard	cytosol	48.07	48.47
CDY51562	Canola	cytosol	47.79	48.19
EES06149	Sorghum	cytosol	42.82	44.8
Os02t0114600-02	Rice	cytosol	43.92	44.17
HORVU6Hr1G007030.1	Barley	cytosol	41.99	43.93
Zm00001d014986_P001	Maize	cytosol	42.82	42.7
TraesCS6A01G037900.1	Wheat	cytosol	42.82	42.7
GSMUA_Achr4P20790_001	Banana	extracellular	43.65	41.91
TraesCS6D01G043400.1	Wheat	cytosol	42.54	40.31
TraesCS6B01G052900.2	Wheat	cytosol	40.61	38.48
KRG95556	Soybean	cytosol	22.93	24.06
KRH67237	Soybean	cytosol	22.38	23.48
KRH11716	Soybean	cytosol, golgi, plastid	23.48	22.85
KRH11179	Soybean	mitochondrion, plastid	24.86	22.22
KRH71403	Soybean	cytosol	20.99	22.09
KRH32035	Soybean	cytosol	20.99	22.09
KRH56558	Soybean	cytosol	25.97	21.96
KRG93237	Soybean	cytosol	25.97	21.96
KRH21075	Soybean	mitochondrion	24.31	21.73
KRH58897	Soybean	cytosol	25.14	20.82
KRG97442	Soybean	cytosol, nucleus, peroxisome	21.27	20.81
KRH42810	Soybean	cytosol	24.86	20.59
KRH42654	Soybean	cytosol	21.82	20.36
KRG93186	Soybean	cytosol	22.1	20.1
KRH36711	Soybean	cytosol	22.38	20.1
KRH26429	Soybean	cytosol	19.61	19.51
KRH31463	Soybean	cytosol	20.72	19.48
KRH61941	Soybean	plastid	18.78	19.37
KRH18847	Soybean	cytosol	25.41	19.37
KRH22905	Soybean	cytosol	20.17	18.77
KRH16647	Soybean	cytosol, plastid	24.59	18.66
KRH52601	Soybean	extracellular, golgi	20.44	18.55
KRH42190	Soybean	cytosol, plastid	24.59	18.5
KRH53131	Soybean	cytosol	24.31	18.49
KRH58301	Soybean	cytosol	24.31	18.3
KRH03453	Soybean	cytosol	20.44	18.14
KRH56929	Soybean	cytosol	19.89	17.69
KRH24879	Soybean	cytosol	19.34	17.63
KRH62415	Soybean	cytosol	13.26	17.39
KRH12864	Soybean	cytosol, plasma membrane	15.47	17.23
KRH72270	Soybean	cytosol	6.08	16.79
KRH29930	Soybean	cytosol	16.02	16.71
KRH63378	Soybean	cytosol	20.17	16.55
KRH57678	Soybean	cytosol	17.4	15.99
KRH54527	Soybean	cytosol	19.34	15.87
KRG94518	Soybean	mitochondrion	16.85	15.21
KRH06951	Soybean	cytosol	16.85	15.1
KRH70694	Soybean	cytosol	20.99	14.1
KRH74828	Soybean	cytosol	20.72	13.97
KRH45883	Soybean	cytosol	20.44	13.73
KRG99114	Soybean	cytosol	20.17	13.54
KRH55297	Soybean	cytosol	10.22	12.63

Protein Annotations

EntrezGene:100798211	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02004208	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_07G071400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1KIB6	InterPro:IPR001810
InterPro:IPR015915	EnsemblPlants:KRH48153	ProteinID:KRH48153	ProteinID:KRH48153.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
PFAM:PF00646	PFAM:PF01344	PANTHER:PTHR24414	PANTHER:PTHR24414:SF40	SMART:SM00256	SMART:SM00612
SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI00023381DB	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:6500439..6503982

Molecular Weight (calculated)

40479.3 Da

IEP (calculated)

5.405

GRAVY (calculated)

-0.104

Length

362 amino acids

Sequence
(BLAST)

001: MEHLDDGKES SNSVNEIEAT NSLLICGLPD DLSLMCLARV PRKYHSVLKC VSKRWRDLIC SEEWYHYRRK HKLDETWIYA LCRDKSNEIF CYVLDPTTSR
101: RYWKLLDGLP PHISNRKGMG FEALGNKLFL LGGCSGFLDS TDEAYSYDAS SNCWVEAASL SNARCYFACE VLDEKLYAIG GLVSNSSDNS WDTFDPLTKC
201: WTFHIDPNIA SDIEDSVVLD GKIYTRCARH TDVAPHAFAV VYEPSSGTWQ YADADMVSGW TGPAVVVYGT LYVLDQSLGT RLMMWHKERR EWIPVGKLSP
301: LLTRPPCQLV AVGKSIFIVG KTLSTVVVDV GDLGNEGQVM MGSSIPGLLS DFNVISCKCL SI

Best Arabidopsis Sequence Match ( AT3G61350.1 )
(BLAST)

001: MACIVEDPQR AGQSNETQIA LISGVPDDIS KSCLARVPRE YHMAMKCVSR RWRDFVCSDE MCDYRNEFNL AESWIYALCR DISGGVFLHM LNPFSSRRSW
101: KRINDYPYIP MREGMGFAVL GKRLFVLGGC GWLEDATDEI YCYDAAMNTW FDVVPPLSTK RCYFACETLD GKIIAIGGLG LNPNAKRTWD IYDPLTRTCK
201: SCSDVNIVPE MEDSFVMDGR IYIRGGVGGS STAVYSASSG IWERMDDDMA SGWRGPAVVV AGDLYVLDQT FGAKLTMWCK DTRMWIHIGK LSQLVMKQPC
301: RLVSIGNSIF VIGKDCSTVV IDVENVRKNK MNGVMVCSSI PKTWDDDIDV ISCKSVAI

Arabidopsis Description

SKIP4F-box/kelch-repeat protein SKIP4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.