CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99114	Soybean	cytosol	92.76	92.76
KRH74828	Soybean	cytosol	77.74	78.03
KRH70694	Soybean	cytosol	76.62	76.62
CDY33755	Canola	cytosol	16.51	72.36
Solyc04g005870.1.1	Tomato	cytosol	7.05	71.7
Solyc04g005670.1.1	Tomato	cytosol	52.88	70.54
PGSC0003DMT400007346	Potato	nucleus	56.03	69.75
TraesCS4D01G286700.1	Wheat	cytosol	41.0	66.97
CDY60836	Canola	cytosol	45.83	65.0
Bra017407.1-P	Field mustard	nucleus, plastid	52.88	64.92
AT1G26930.1	Thale cress	cytosol	50.28	64.37
CDY62015	Canola	nucleus	49.54	64.34
AT1G14330.1	Thale cress	nucleus	52.5	64.17
Bra026838.1-P	Field mustard	nucleus	48.24	63.88
Bra026575.1-P	Field mustard	nucleus	52.5	63.74
CDX81631	Canola	nucleus	48.24	63.57
CDY09349	Canola	nucleus	52.32	63.51
TraesCS4A01G493800.1	Wheat	cytosol	29.5	63.35
CDY17425	Canola	cytosol	46.94	63.09
KRH63378	Soybean	cytosol	51.58	63.04
CDY49094	Canola	nucleus	49.54	62.97
CDY62176	Canola	nucleus	52.13	62.86
CDY52764	Canola	cytosol	49.54	62.82
KRH54527	Soybean	cytosol	51.39	62.81
Bra016297.1-P	Field mustard	cytosol	49.54	62.68
CDY46430	Canola	cytosol	49.54	62.68
CDY16205	Canola	nucleus	48.98	62.41
PGSC0003DMT400059324	Potato	cytosol	55.29	62.08
Bra024801.1-P	Field mustard	nucleus	52.13	62.03
CDY45190	Canola	nucleus	52.13	62.03
CDY03028	Canola	cytosol	51.58	61.92
AT2G02870.1	Thale cress	nucleus	53.62	61.88
VIT_01s0026g02080.t01	Wine grape	nucleus	60.85	60.63
GSMUA_Achr4P09990_001	Banana	cytosol	48.05	60.37
KXG30756	Sorghum	cytosol	46.94	59.53
GSMUA_Achr7P20970_001	Banana	cytosol	43.41	59.24
Zm00001d052253_P001	Maize	cytosol	46.01	58.63
TraesCS6A01G306000.1	Wheat	cytosol	46.2	58.59
TraesCS6B01G334300.1	Wheat	cytosol, nucleus, plastid	46.2	58.59
TraesCS6D01G285100.1	Wheat	cytosol, nucleus, plastid	46.2	58.59
HORVU6Hr1G075590.1	Barley	cytosol, nucleus, plastid	46.01	58.35
GSMUA_Achr4P00520_001	Banana	cytosol	41.74	57.84
GSMUA_Achr8P01380_001	Banana	cytosol	40.45	57.37
Os02t0748300-01	Rice	cytosol	45.27	57.28
KRH03453	Soybean	cytosol	43.04	56.86
TraesCS4A01G016200.1	Wheat	cytosol	45.45	56.84
Zm00001d048310_P001	Maize	cytosol	45.08	56.78
KXG40080	Sorghum	cytosol	44.9	56.54
Os03t0171600-01	Rice	cytosol	45.08	56.38
TraesCS7A01G004600.1	Wheat	cytosol	37.85	56.04
GSMUA_Achr1P21630_001	Banana	cytosol	38.96	55.7
HORVU4Hr1G075310.1	Barley	cytosol	45.27	55.58
Zm00001d027856_P001	Maize	cytosol	44.16	55.48
CDY33754	Canola	nucleus	25.23	54.4
KRH56929	Soybean	cytosol	40.82	54.05
OQU91835	Sorghum	cytosol, nucleus, plastid	44.53	54.05
Zm00001d033012_P001	Maize	cytosol	44.71	54.04
TraesCS7D01G005100.1	Wheat	cytosol	21.52	53.95
Zm00001d014203_P001	Maize	cytosol, nucleus, plastid	44.34	53.95
TraesCS7D01G007100.1	Wheat	cytosol	36.73	53.23
PGSC0003DMT400091785	Potato	cytosol, mitochondrion, plastid	15.21	51.9
GSMUA_Achr10P...	Banana	nucleus	41.0	50.8
GSMUA_Achr8P17960_001	Banana	nucleus	38.96	50.48
TraesCS4A01G487800.1	Wheat	cytosol	24.12	50.39
KRH26429	Soybean	cytosol	33.4	49.45
KRH29930	Soybean	cytosol	31.54	48.99
Zm00001d048898_P001	Maize	cytosol	38.78	48.05
GSMUA_Achr2P14920_001	Banana	mitochondrion	42.49	47.91
HORVU2Hr1G057140.1	Barley	cytosol	16.51	47.85
HORVU2Hr1G057150.1	Barley	cytosol	16.51	47.85
Os11t0602800-01	Rice	nucleus	38.22	47.69
KRH24879	Soybean	cytosol	34.88	47.36
KRH22905	Soybean	cytosol	34.14	47.3
TraesCS4A01G492300.1	Wheat	cytosol, golgi, plastid	33.4	46.75
OQU83795	Sorghum	cytosol	38.59	46.64
Solyc05g007220.2.1	Tomato	nucleus	55.29	46.27
PGSC0003DMT400007391	Potato	cytosol	11.5	46.27
Zm00001d007596_P001	Maize	nucleus, plastid	37.85	46.26
KRH12864	Soybean	cytosol, plasma membrane	27.27	45.23
TraesCS4A01G489600.1	Wheat	cytosol	31.54	44.97
TraesCS4A01G489300.1	Wheat	cytosol	31.73	44.88
GSMUA_Achr3P01570_001	Banana	golgi	40.26	44.38
GSMUA_Achr4P24130_001	Banana	nucleus	41.93	43.71
HORVU7Hr1G000010.5	Barley	cytosol	33.02	40.64
HORVU7Hr1G000070.1	Barley	cytosol	35.06	36.0
KRG94518	Soybean	mitochondrion	26.35	35.41
KRH06951	Soybean	cytosol	26.53	35.4
TraesCS4A01G491100.1	Wheat	cytosol	34.32	35.17
KRH57678	Soybean	cytosol	23.56	32.23
TraesCS4A01G493200.1	Wheat	cytosol, plasma membrane	27.46	31.22
KRH67237	Soybean	cytosol	13.91	21.74
KRH42654	Soybean	cytosol	15.58	21.65
KRH31463	Soybean	cytosol	15.4	21.56
KRH11716	Soybean	cytosol, golgi, plastid	14.84	21.51
KRG97442	Soybean	cytosol, nucleus, peroxisome	14.47	21.08
KRH42810	Soybean	cytosol	17.07	21.05
KRG95556	Soybean	cytosol	13.36	20.87
KRG93237	Soybean	cytosol	16.51	20.79
KRH72270	Soybean	cytosol	5.01	20.61
KRH58897	Soybean	cytosol	16.7	20.59
KRH56558	Soybean	cytosol	16.33	20.56
KRH48153	Soybean	cytosol	13.73	20.44
KRH32035	Soybean	cytosol	12.99	20.35
KRH71403	Soybean	cytosol	12.99	20.35
KRH48154	Soybean	cytosol	13.73	20.11
KRH48156	Soybean	cytosol	13.36	19.89
KRG93186	Soybean	cytosol	14.47	19.6
KRH65052	Soybean	cytosol	11.5	19.38
KRH18847	Soybean	cytosol	17.07	19.37
KRH36711	Soybean	cytosol	14.47	19.35
KRH62415	Soybean	cytosol	9.83	19.2
KRH42190	Soybean	cytosol, plastid	16.88	18.92
KRH58301	Soybean	cytosol	16.88	18.92
KRH16647	Soybean	cytosol, plastid	16.51	18.66
KRH53131	Soybean	cytosol	16.14	18.28
KRH11179	Soybean	mitochondrion, plastid	13.17	17.53
KRH21075	Soybean	mitochondrion	12.99	17.28
KRH65051	Soybean	cytosol	10.2	16.77
KRH61941	Soybean	plastid	10.58	16.24
KRH55297	Soybean	cytosol	8.53	15.7
KRH52601	Soybean	extracellular, golgi	11.32	15.29

Protein Annotations

EntrezGene:100791897	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02005293	EnsemblPlantsGene:GLYMA_08G298900	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019005
GO:GO:0019538	GO:GO:0030162	GO:GO:0031625	GO:GO:0042787	GO:GO:0043161	UniProt:I1KXS1
InterPro:IPR015915	EnsemblPlants:KRH45883	ProteinID:KRH45883	ProteinID:KRH45883.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
PFAM:PF01344	PANTHER:PTHR24413	PANTHER:PTHR24413:SF138	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI0002338879
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:41682158..41684546

Molecular Weight (calculated)

60866.6 Da

IEP (calculated)

4.962

GRAVY (calculated)

-0.600

Length

539 amino acids

Sequence
(BLAST)

001: MLEGRSCVVP RLFPSSCQAD NKWSFMTYLP DLDIKNGKRP LDTDGEEEPQ PRKVNRRVDS RHHGETTRFL FQKQSCHADD SVVPQMDQDR RKDCVLLSNW
101: QRVEKADAFS AQLLDEREQH RAGDSLVVST DLQSNKKEED QLEDSSDSGV QQSDEQKMEQ EVEGDLLDAG DQQPPDDQEE HHGGDSSDSG SLLPRMNRDS
201: SIACLSRCSR SDYGSLASLN RSFRNTIRSG ELYRWRRLNG IIEHWIYFSC ALLEWEAYDP IRERWMHLPR MASNECFMCS DKESLAVGTE LLVFGREMRS
301: HVIYRYSLLT NSWTSGMRMN APRCLFGSAS LGEIAILAGG CDLDGHILDS AELYNSENQT WELLPSMNKP RKMCSGVFMD GKFYVIGGIG GKDSKLLTCG
401: EEYNIQTRTW TEIPNMSPGR SARGAEMPAT AEAPPLVAVV NDELYAADYA DMEVKKYDKE RRVWVTIGRL PERAVSMNGW GLAFRACGDM LIVIGGPRTH
501: GEGFIELNSW VPSEGPPQWN LLARKRSGNF VYNCAVMGC

Best Arabidopsis Sequence Match ( AT2G02870.2 )
(BLAST)

001: MLEDRSPDSC LSTRVFSSSR LSESNWSNSY MYPEDDDKLL GNGKRALEVV GEVRQTKSLK LMGFSIIYDS DSSDYSLSGG EEQADAAIGD GSSSRQEQEQ
101: QSDFNDNGGD SSDSHSLINE IGRDNSIDCL IRCSRSDYGS IASLNRNFRS LVKSGEIYRL RRQNGFVEHW VYFSCQLLEW VAFDPVERRW MQLPTMPSSV
201: TFMCADKESL AVGTDLLVLG KDDFSSHVIY RYSLLTNSWS SGMKMNSPRC LFGSASLGEI AIFAGGCDSQ GKILDFAEMY NSELQTWITL PRMNKPRKMC
301: SGVFMDGKFY VIGGIGGADS KGLTCGEEYD LETKKWTQIP DLSPPRSRAD QADMSPAAEA PPLVAVVNNQ LYAADHADME VRKYDKENKK WLTVGRLPER
401: AGSVNGWGLA FRACGERLIV IGGPKCSGGG FIELNSWIPS DGGPPQWTLL DRKHSPTFVY NCAVMGC

Arabidopsis Description

SKIP11F-box/kelch-repeat protein SKIP11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L736]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.