Factsheet for HORVU4Hr1G075310.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G286700.1	Wheat	cytosol	74.72	99.39
TraesCS4A01G016200.1	Wheat	cytosol	95.44	97.22
Os03t0171600-01	Rice	cytosol	85.42	87.01
KXG40080	Sorghum	cytosol	84.05	86.22
Zm00001d048310_P001	Maize	cytosol	82.0	84.11
Zm00001d027856_P001	Maize	cytosol	81.32	83.22
GSMUA_Achr8P01380_001	Banana	cytosol	54.67	63.16
HORVU2Hr1G057140.1	Barley	cytosol	26.42	62.37
HORVU2Hr1G057150.1	Barley	cytosol	26.42	62.37
GSMUA_Achr1P21630_001	Banana	cytosol	52.85	61.54
CDY33755	Canola	cytosol	17.08	60.98
HORVU6Hr1G075590.1	Barley	cytosol, nucleus, plastid	58.77	60.71
VIT_17s0000g05920.t01	Wine grape	cytosol	58.77	58.24
GSMUA_Achr8P17960_001	Banana	nucleus	54.44	57.45
GSMUA_Achr10P...	Banana	nucleus	55.81	56.32
CDY62015	Canola	nucleus	53.08	56.14
KRH54527	Soybean	cytosol	56.04	55.78
Bra026838.1-P	Field mustard	nucleus	51.71	55.77
CDX81631	Canola	nucleus	51.71	55.5
KRH63378	Soybean	cytosol	55.58	55.33
Solyc03g113010.1.1	Tomato	cytosol	55.13	54.88
CDY49094	Canola	nucleus	52.85	54.72
Solyc04g005670.1.1	Tomato	cytosol	50.11	54.46
CDY60836	Canola	cytosol	46.92	54.21
PGSC0003DMT400007346	Potato	nucleus	53.3	54.04
Bra026575.1-P	Field mustard	nucleus	53.76	53.15
AT1G14330.1	Thale cress	nucleus	53.3	53.06
CDY62176	Canola	nucleus	53.99	53.02
HORVU7Hr1G000010.5	Barley	cytosol	52.85	52.97
CDY09349	Canola	nucleus	53.53	52.93
PGSC0003DMT400046591	Potato	extracellular	54.9	52.85
Solyc04g005870.1.1	Tomato	cytosol	6.38	52.83
GSMUA_Achr2P14920_001	Banana	mitochondrion	57.4	52.72
KRH03453	Soybean	cytosol	48.97	52.7
Bra017407.1-P	Field mustard	nucleus, plastid	52.62	52.62
CDY17425	Canola	cytosol	48.06	52.62
AT1G26930.1	Thale cress	cytosol	50.34	52.49
CDY45190	Canola	nucleus	53.53	51.88
Bra024801.1-P	Field mustard	nucleus	53.53	51.88
CDY03028	Canola	cytosol	52.85	51.67
CDY46430	Canola	cytosol	49.89	51.41
CDY52764	Canola	cytosol	49.66	51.29
Bra016297.1-P	Field mustard	cytosol	49.66	51.17
AT2G02870.1	Thale cress	nucleus	54.21	50.96
CDY16205	Canola	nucleus	48.97	50.83
KRH56929	Soybean	cytosol	46.7	50.37
PGSC0003DMT400059324	Potato	cytosol	53.99	49.38
CDY33754	Canola	nucleus	27.56	48.4
GSMUA_Achr3P01570_001	Banana	golgi	53.53	48.06
GSMUA_Achr4P24130_001	Banana	nucleus	56.04	47.58
VIT_01s0026g02080.t01	Wine grape	nucleus	56.26	45.66
HORVU7Hr1G000070.1	Barley	cytosol	54.21	45.33
KRH45883	Soybean	cytosol	55.58	45.27
KRG99114	Soybean	cytosol	55.35	45.08
KRH70694	Soybean	cytosol	54.44	44.34
KRH74828	Soybean	cytosol	53.99	44.13
HORVU2Hr1G103880.2	Barley	cytosol	43.74	43.05
PGSC0003DMT400091785	Potato	cytosol, mitochondrion, plastid	14.35	39.87
PGSC0003DMT400007391	Potato	cytosol	11.16	36.57
Solyc05g007220.2.1	Tomato	nucleus	51.48	35.09
HORVU4Hr1G074720.7	Barley	plasma membrane	21.41	21.41
HORVU6Hr1G007030.1	Barley	cytosol	16.4	20.81
HORVU6Hr1G037850.2	Barley	plastid	19.82	20.42
HORVU1Hr1G035200.1	Barley	plasma membrane	22.1	20.42
HORVU6Hr1G052010.1	Barley	cytosol	21.18	20.22
HORVU3Hr1G116690.2	Barley	mitochondrion	22.1	19.92
HORVU3Hr1G096780.1	Barley	cytosol, plastid	17.31	19.74
HORVU2Hr1G068790.2	Barley	cytosol	17.08	19.53
HORVU7Hr1G002140.2	Barley	mitochondrion	20.5	18.87
HORVU6Hr1G007080.1	Barley	cytosol	2.96	14.94

Protein Annotations

EMBL:AK364098	EnsemblPlants:HORVU4Hr1G075310.1	EnsemblPlantsGene:HORVU4Hr1G075310	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413	PANTHER:PTHR24413:SF133
PFAM:PF01344	SEG:seg	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI0002006626	UniProt:F2DJN0
MapMan:35.1	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DJN0]

Coordinates

chrchr4H:-:597592308..597595230

Molecular Weight (calculated)

47985.7 Da

IEP (calculated)

5.516

GRAVY (calculated)

-0.338

Length

439 amino acids

Sequence
(BLAST)

001: MMLEGKSCLV SRSLPSYCEP ESEWAFLARE VSVISGGKRP APEDFGAEDM EEADGGGGGS SGKRSKSPSP QPHTPDITES HGSSRHASSG GGGGEQQGSG
101: ANLIGEIGRD LSINCLLRLS RSDYGSVAFL NRDFNSLVRN GEIYRLRRQN GIAEHWVYFS CNVLEWDAYD PYRERWIQVP KMPPDECFMC SDKESLAVGT
201: ELLVFGMAHI VFRYSILTNS WTRADPMNSP RCLFGSTSVG EKAYVAGGTD ASGKILSSAE MYDSVTHTWT PLPSMNRARK MCSGVFLDGK FYVIGGVTNN
301: NQVLTCGEEY DLNRGSWRVI ENMSEGLNGV TGAPPLIAVV NNQLYAADYS EKDVKKYDKL NNKWIALGKL PERSVSMNGW GLAFRACGDR LIVIGGPRTS
401: IGGIIELNSW VPDEQPPVWN LVATRQSGNF VYNCAVMGC

Best Arabidopsis Sequence Match ( AT1G14330.1 )
(BLAST)

001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C

Arabidopsis Description

At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.