Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49094 | Canola | nucleus | 97.83 | 95.75 |
| CDY33755 | Canola | cytosol | 26.75 | 90.24 |
| CDX81631 | Canola | nucleus | 85.78 | 87.04 |
| CDY33754 | Canola | nucleus | 49.4 | 82.0 |
| AT1G14330.1 | Thale cress | nucleus | 86.27 | 81.18 |
| CDY60836 | Canola | cytosol | 66.51 | 72.63 |
| CDY17425 | Canola | cytosol | 69.64 | 72.07 |
| CDY09349 | Canola | nucleus | 76.14 | 71.17 |
| CDY45190 | Canola | nucleus | 77.59 | 71.08 |
| CDY03028 | Canola | cytosol | 76.87 | 71.05 |
| CDY62176 | Canola | nucleus | 76.39 | 70.92 |
| Solyc04g005870.1.1 | Tomato | cytosol | 8.43 | 66.04 |
| TraesCS4D01G286700.1 | Wheat | cytosol | 51.08 | 64.24 |
| Solyc04g005670.1.1 | Tomato | cytosol | 60.48 | 62.13 |
| TraesCS4A01G493800.1 | Wheat | cytosol | 36.63 | 60.56 |
| PGSC0003DMT400007346 | Potato | nucleus | 62.89 | 60.28 |
| CDY52764 | Canola | cytosol | 60.24 | 58.82 |
| CDY46430 | Canola | cytosol | 60.24 | 58.69 |
| CDY16205 | Canola | nucleus | 58.55 | 57.45 |
| GSMUA_Achr4P09990_001 | Banana | cytosol | 58.31 | 56.41 |
| TraesCS6B01G334300.1 | Wheat | cytosol, nucleus, plastid | 56.39 | 55.06 |
| TraesCS6D01G285100.1 | Wheat | cytosol, nucleus, plastid | 56.39 | 55.06 |
| PGSC0003DMT400059324 | Potato | cytosol | 63.61 | 55.0 |
| TraesCS6A01G306000.1 | Wheat | cytosol | 56.14 | 54.82 |
| GSMUA_Achr7P20970_001 | Banana | cytosol | 52.05 | 54.68 |
| HORVU6Hr1G075590.1 | Barley | cytosol, nucleus, plastid | 55.9 | 54.59 |
| GSMUA_Achr1P21630_001 | Banana | cytosol | 49.4 | 54.38 |
| Zm00001d052253_P001 | Maize | cytosol | 55.42 | 54.37 |
| Os02t0748300-01 | Rice | cytosol | 55.66 | 54.23 |
| TraesCS7A01G004600.1 | Wheat | cytosol | 47.47 | 54.12 |
| KXG30756 | Sorghum | cytosol | 55.42 | 54.12 |
| Os03t0171600-01 | Rice | cytosol | 56.14 | 54.06 |
| TraesCS4A01G016200.1 | Wheat | cytosol | 56.14 | 54.06 |
| GSMUA_Achr4P00520_001 | Banana | cytosol | 50.6 | 53.98 |
| GSMUA_Achr8P01380_001 | Banana | cytosol | 49.4 | 53.95 |
| KXG40080 | Sorghum | cytosol | 55.42 | 53.74 |
| Zm00001d048310_P001 | Maize | cytosol | 54.94 | 53.27 |
| HORVU4Hr1G075310.1 | Barley | cytosol | 56.14 | 53.08 |
| Zm00001d027856_P001 | Maize | cytosol | 54.7 | 52.91 |
| TraesCS7D01G007100.1 | Wheat | cytosol | 47.23 | 52.69 |
| Zm00001d014203_P001 | Maize | cytosol, nucleus, plastid | 55.66 | 52.14 |
| CDY70379 | Canola | cytosol | 19.76 | 51.9 |
| OQU91835 | Sorghum | cytosol, nucleus, plastid | 55.42 | 51.8 |
| CDX68177 | Canola | cytosol | 51.57 | 51.32 |
| CDX73096 | Canola | cytosol | 49.4 | 51.12 |
| Zm00001d033012_P001 | Maize | cytosol | 54.94 | 51.12 |
| CDX85842 | Canola | cytosol | 52.05 | 50.59 |
| CDX96551 | Canola | cytosol | 49.4 | 50.49 |
| GSMUA_Achr8P17960_001 | Banana | nucleus | 50.6 | 50.48 |
| KRH74828 | Soybean | cytosol | 64.58 | 49.91 |
| TraesCS7D01G005100.1 | Wheat | cytosol | 25.78 | 49.77 |
| VIT_01s0026g02080.t01 | Wine grape | nucleus | 64.82 | 49.72 |
| KRH45883 | Soybean | cytosol | 64.34 | 49.54 |
| KRH70694 | Soybean | cytosol | 64.34 | 49.54 |
| KRG99114 | Soybean | cytosol | 63.61 | 48.98 |
| GSMUA_Achr10P... | Banana | nucleus | 50.84 | 48.51 |
| Os11t0602800-01 | Rice | nucleus | 49.88 | 47.92 |
| Zm00001d048898_P001 | Maize | cytosol | 49.4 | 47.13 |
| TraesCS4A01G487800.1 | Wheat | cytosol | 28.92 | 46.51 |
| Zm00001d007596_P001 | Maize | nucleus, plastid | 48.67 | 45.8 |
| GSMUA_Achr2P14920_001 | Banana | mitochondrion | 52.53 | 45.61 |
| PGSC0003DMT400091785 | Potato | cytosol, mitochondrion, plastid | 17.35 | 45.57 |
| OQU83795 | Sorghum | cytosol | 48.92 | 45.52 |
| TraesCS4A01G492300.1 | Wheat | cytosol, golgi, plastid | 41.93 | 45.19 |
| HORVU2Hr1G057140.1 | Barley | cytosol | 20.0 | 44.62 |
| HORVU2Hr1G057150.1 | Barley | cytosol | 20.0 | 44.62 |
| TraesCS4A01G489300.1 | Wheat | cytosol | 40.72 | 44.36 |
| TraesCS4A01G489600.1 | Wheat | cytosol | 40.24 | 44.18 |
| PGSC0003DMT400007391 | Potato | cytosol | 14.22 | 44.03 |
| GSMUA_Achr3P01570_001 | Banana | golgi | 50.12 | 42.54 |
| GSMUA_Achr4P24130_001 | Banana | nucleus | 52.53 | 42.17 |
| CDY31534 | Canola | cytosol | 36.87 | 40.8 |
| CDX80156 | Canola | cytosol | 37.11 | 40.63 |
| Solyc05g007220.2.1 | Tomato | nucleus | 62.65 | 40.37 |
| HORVU7Hr1G000010.5 | Barley | cytosol | 41.45 | 39.27 |
| CDY66938 | Canola | cytosol, mitochondrion | 15.18 | 35.8 |
| CDX82682 | Canola | cytosol | 26.27 | 34.82 |
| HORVU7Hr1G000070.1 | Barley | cytosol | 43.61 | 34.48 |
| CDY53460 | Canola | cytosol | 13.98 | 32.95 |
| TraesCS4A01G491100.1 | Wheat | cytosol | 41.45 | 32.7 |
| CDY65956 | Canola | cytosol | 14.46 | 31.91 |
| CDY34175 | Canola | cytosol | 30.36 | 30.66 |
| CDY28493 | Canola | cytosol | 30.12 | 30.41 |
| CDY13683 | Canola | cytosol | 31.08 | 29.79 |
| CDY52395 | Canola | cytosol | 30.84 | 29.56 |
| TraesCS4A01G493200.1 | Wheat | cytosol, plasma membrane | 33.49 | 29.32 |
| CDY36146 | Canola | cytosol | 29.16 | 29.02 |
| CDY63005 | Canola | cytosol | 28.92 | 28.78 |
| CDY69929 | Canola | cytosol | 28.92 | 28.78 |
| CDY64780 | Canola | cytosol | 29.4 | 28.11 |
| CDX90239 | Canola | cytosol | 26.75 | 27.96 |
| CDY49979 | Canola | cytosol | 26.75 | 27.21 |
| CDY12345 | Canola | cytosol | 28.92 | 26.37 |
| CDY01301 | Canola | cytosol | 8.92 | 23.57 |
| CDY04697 | Canola | cytosol | 11.57 | 21.52 |
| CDY30645 | Canola | nucleus | 11.57 | 21.52 |
| CDY49977 | Canola | cytosol | 24.1 | 21.28 |
| CDY12647 | Canola | cytosol | 17.83 | 20.44 |
| CDX81755 | Canola | cytosol | 19.04 | 20.26 |
| CDX96091 | Canola | cytosol | 18.07 | 20.11 |
| CDY51562 | Canola | cytosol | 17.35 | 20.06 |
| CDY01812 | Canola | cytosol | 17.59 | 19.57 |
| CDY18573 | Canola | cytosol | 16.39 | 19.54 |
| CDY58793 | Canola | cytosol | 16.87 | 19.5 |
| CDY33348 | Canola | cytosol | 8.43 | 19.44 |
| CDY22982 | Canola | cytosol | 16.14 | 19.36 |
| CDY58259 | Canola | cytosol | 16.14 | 19.31 |
| CDX99248 | Canola | cytosol | 16.14 | 19.25 |
| CDX82306 | Canola | cytosol | 15.9 | 19.08 |
| CDX96822 | Canola | extracellular, vacuole | 19.76 | 18.98 |
| CDY08233 | Canola | mitochondrion | 19.52 | 18.62 |
| CDX99882 | Canola | mitochondrion, plastid | 17.83 | 18.59 |
| CDY36145 | Canola | cytosol | 15.66 | 18.57 |
| CDX76807 | Canola | cytosol | 16.39 | 18.43 |
| CDY64382 | Canola | plastid | 15.18 | 18.42 |
| CDY02451 | Canola | cytosol | 19.28 | 18.39 |
| CDY10574 | Canola | cytosol | 19.28 | 18.39 |
| CDY26117 | Canola | cytosol | 19.28 | 18.39 |
| CDY33062 | Canola | mitochondrion, plastid | 19.28 | 18.39 |
| CDY26295 | Canola | mitochondrion, plastid | 17.59 | 18.34 |
| CDY66857 | Canola | cytosol | 15.66 | 18.26 |
| CDY24045 | Canola | mitochondrion | 19.04 | 18.16 |
| CDY52247 | Canola | cytosol | 13.98 | 18.12 |
| CDY70128 | Canola | cytosol | 14.7 | 18.1 |
| CDY15708 | Canola | cytosol | 14.94 | 18.08 |
| CDY34765 | Canola | cytosol | 16.14 | 18.01 |
| CDX90085 | Canola | plastid | 14.94 | 17.97 |
| CDY11811 | Canola | plastid | 14.94 | 17.97 |
| CDY35075 | Canola | cytosol | 7.95 | 17.93 |
| CDY03923 | Canola | cytosol | 14.46 | 17.75 |
| CDY35074 | Canola | cytosol | 8.92 | 17.7 |
| CDY54825 | Canola | cytosol | 8.19 | 17.62 |
| CDY64883 | Canola | golgi, plastid | 17.35 | 17.52 |
| CDY00415 | Canola | mitochondrion | 8.92 | 17.29 |
| CDY01300 | Canola | cytosol | 8.92 | 16.52 |
| CDY17172 | Canola | cytosol | 5.3 | 15.28 |
| CDY15707 | Canola | cytosol, plastid | 11.33 | 13.31 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 10.6 | 12.46 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | UniProt:A0A078JA12 | EnsemblPlants:CDY62015 | ProteinID:CDY62015 | ProteinID:CDY62015.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00035833001 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller |
| InterPro:Kelch_1 | PFAM:PF01344 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF138 | SMART:SM00612 | SUPFAM:SSF117281 |
| UniParc:UPI0004EAF6A1 | SEG:seg | : | : | : | : |
Description
BnaC05g49720DBnaC05g49720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JA12]
Coordinates
chrLK034080:-:9181..11011
Molecular Weight (calculated)
46519.0 Da
IEP (calculated)
6.620
GRAVY (calculated)
-0.405
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEDRTYLLA RVFSSSRLSE SKWLYMHPSE EEDSSASNLR NAKRAFDDDD ELRQSKSLKL TRFSIHQQQH GDGDSLINDI GRDNSISCLL RCSRSDYPSI
101: ASLNRSFRSL VNSGDIYRLR RQNMIVEHWV YFSCQLLEWV AFDPVERRWM NLPTMPSGVT FMCADKESLA VGTDLLVLGK DDDSSHVVYR YSLLTNSWSP
201: GERMNSPRCL FGSASLGEIA IFAGGCDSLG KISDVAEMYN SELQSWTTLP NMNKPRKMCS GVFMDGKFYV IGGVGGGEEY DLATKKWTEI PEMSPPRSRE
301: TPASAEAPPL VAVVNNQLYA ADHAGMEVRK YDKESKRWFT LGRLPERAGS VNGWGLAFRA CGERLIVIGG PRSSGGGFIE LNSWVPSNDR SPPVWTLLDR
401: KHSSNFVYNC AVMGC
101: ASLNRSFRSL VNSGDIYRLR RQNMIVEHWV YFSCQLLEWV AFDPVERRWM NLPTMPSGVT FMCADKESLA VGTDLLVLGK DDDSSHVVYR YSLLTNSWSP
201: GERMNSPRCL FGSASLGEIA IFAGGCDSLG KISDVAEMYN SELQSWTTLP NMNKPRKMCS GVFMDGKFYV IGGVGGGEEY DLATKKWTEI PEMSPPRSRE
301: TPASAEAPPL VAVVNNQLYA ADHAGMEVRK YDKESKRWFT LGRLPERAGS VNGWGLAFRA CGERLIVIGG PRSSGGGFIE LNSWVPSNDR SPPVWTLLDR
401: KHSSNFVYNC AVMGC
001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C
Arabidopsis Description
At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.