Factsheet for Os02t0748300-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30756	Sorghum	cytosol	89.2	89.41
Zm00001d052253_P001	Maize	cytosol	87.79	88.42
TraesCS6A01G306000.1	Wheat	cytosol	87.79	88.0
TraesCS6B01G334300.1	Wheat	cytosol, nucleus, plastid	87.79	88.0
HORVU6Hr1G075590.1	Barley	cytosol, nucleus, plastid	87.56	87.76
TraesCS6D01G285100.1	Wheat	cytosol, nucleus, plastid	87.56	87.76
GSMUA_Achr4P00520_001	Banana	cytosol	61.97	67.87
GSMUA_Achr4P09990_001	Banana	cytosol	67.84	67.37
GSMUA_Achr7P20970_001	Banana	cytosol	62.44	67.34
Os03t0171600-01	Rice	cytosol	61.97	61.25
Solyc04g005670.1.1	Tomato	cytosol	56.1	59.16
VIT_17s0000g05920.t01	Wine grape	cytosol	61.5	59.14
CDY33755	Canola	cytosol	16.9	58.54
PGSC0003DMT400007346	Potato	nucleus	59.15	58.2
Bra026838.1-P	Field mustard	nucleus	54.69	57.25
CDX81631	Canola	nucleus	54.69	56.97
KRH54527	Soybean	cytosol	57.98	56.01
CDY60836	Canola	cytosol	49.77	55.79
CDY62015	Canola	nucleus	54.23	55.66
KRH63378	Soybean	cytosol	57.04	55.1
AT1G14330.1	Thale cress	nucleus	56.81	54.88
CDY49094	Canola	nucleus	54.46	54.72
Solyc03g113010.1.1	Tomato	cytosol	56.1	54.2
CDY17425	Canola	cytosol	50.94	54.11
Bra017407.1-P	Field mustard	nucleus, plastid	55.4	53.76
Bra026575.1-P	Field mustard	nucleus	55.4	53.15
KRH03453	Soybean	cytosol	50.7	52.94
CDY09349	Canola	nucleus	55.16	52.93
CDY62176	Canola	nucleus	55.4	52.8
CDY03028	Canola	cytosol	55.63	52.78
PGSC0003DMT400046591	Potato	extracellular	56.34	52.63
CDY45190	Canola	nucleus	55.87	52.54
CDY33754	Canola	nucleus	30.75	52.4
Bra024801.1-P	Field mustard	nucleus	55.63	52.32
AT1G26930.1	Thale cress	cytosol	51.64	52.26
Os11t0602800-01	Rice	nucleus	52.82	52.08
AT2G02870.1	Thale cress	nucleus	57.04	52.03
CDY46430	Canola	cytosol	50.47	50.47
CDY52764	Canola	cytosol	50.23	50.35
Bra016297.1-P	Field mustard	cytosol	50.23	50.23
CDY16205	Canola	nucleus	49.3	49.65
PGSC0003DMT400059324	Potato	cytosol	55.4	49.17
Solyc04g005870.1.1	Tomato	cytosol	6.1	49.06
KRH56929	Soybean	cytosol	45.77	47.91
VIT_01s0026g02080.t01	Wine grape	nucleus	60.8	47.87
KRH74828	Soybean	cytosol	57.28	45.44
KRG99114	Soybean	cytosol	57.28	45.27
KRH45883	Soybean	cytosol	57.28	45.27
KRH70694	Soybean	cytosol	57.04	45.08
PGSC0003DMT400091785	Potato	cytosol, mitochondrion, plastid	16.67	44.94
Os04t0619300-01	Rice	cytosol, extracellular	46.24	41.39
Solyc05g007220.2.1	Tomato	nucleus	54.23	35.87
PGSC0003DMT400007391	Potato	cytosol	11.27	35.82
Os10t0388200-01	Rice	cytosol	18.78	23.05
Os02t0504900-01	Rice	cytosol	18.78	20.78
Os04t0380300-01	Rice	plastid	17.84	20.27
Os02t0202900-00	Rice	cytosol	20.66	20.18
Os10t0409900-01	Rice	plastid	20.19	19.46
Os02t0574900-01	Rice	cytosol	20.66	19.13
Os03t0167800-02	Rice	cytosol	19.25	18.72
Os02t0114600-02	Rice	cytosol	15.49	18.33
Os07t0153400-01	Rice	mitochondrion	16.9	17.73
Os10t0363600-01	Rice	cytosol, plastid	19.25	17.26
Os06t0655500-01	Rice	cytosol	13.85	15.36

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EntrezGene:4330727	ProteinID:BAD16457.1	ProteinID:BAS80922.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019005	GO:GO:0019538
GO:GO:0030162	GO:GO:0031625	GO:GO:0043161	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
EnsemblPlantsGene:Os02g0748300	EnsemblPlants:Os02t0748300-01	PFAM:PF01344	PANTHER:PTHR24413	PANTHER:PTHR24413:SF133	UniProt:Q6YUW3
SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI0000358D4D	RefSeq:XP_015626367.1	:	:

Description

F-box protein 109Similar to VMP3 protein. (Os02t0748300-01);Similar to Kelch motif family protein. (Os02t0748300-02)

Coordinates

chr2:-:31444678..31447719

Molecular Weight (calculated)

47255.5 Da

IEP (calculated)

7.517

GRAVY (calculated)

-0.261

Length

426 amino acids

Sequence
(BLAST)

001: MLEGQSCLIS RSLPSSCDQE SRLAYMTYHL LEITRSKRIS STPRIEPDSV AAVAVLTKRP KSARNHECEQ LDCQGSNDQG FSDSSTLISS IGRDNSISCL
101: ARCSRSDYGS IASVNRNFHS LVRSGELYKE RRQLGIAEHW VYFSCNVQEW EAYDPYRSRW MTLPKMPHNE CFMCSDKESL AVGTELLVFG KEILSHIVLS
201: YSILTNSWSP GVDMNAPRCL FGSASFGEKA IVAGGMDAQG RVLRSAELYN SETKRWITLP CMNKARRMCS GVFMNGKFYV IGGMASNTEV LTCGEEYDLE
301: KGTWRVIENM SEGLNGASGA PPLVAVVENE LYAAQYAGKL VRKYNIKDNT WTTLGELPER PEAVNGWGIA FRGCGERLLV IGGPRVMGGG MIELHSWIPR
401: EGPLRWNMIG SKPSGNFVYN CAVMGC

Best Arabidopsis Sequence Match ( AT1G74510.3 )
(BLAST)

001: MLEAPSYLVS RDLPSSCEEE SKWIYNAHCV LQLSLRKRLL DDTDVEGSSA KKMLRVDHGS RGESDKITDS LQLAKTYQSS NQSQQGGGGD QQSSPVTRLD
101: QNALLNCLAH CSLSDFGSIA STNRTFRSLI KDSELYRLRR AKGIVEHWIY FSCRLLEWEA YDPNGDRWLR VPKMTFNECF MCSDKESLAV GTELLVFGKE
201: IMSHVIYRYS ILTNTWTSGM QMNVPRCLFG SASLGEIAVI AGGCDPRGRI LSSAELYNSE TGEWTVIPSM NKARKMCSSV FMDGNFYCIG GIGEGNSKML
301: LCGEVYDLKK KTWTLIPNML PERSSGGGGD QAKEIAAATA ASEAPPLVAV VKDELYAANY AQQEVKKYDK RLNVWNKVGN LPERASSMNG WGMAFRACGD
401: QLVVVGGPRA IGGGFIEINA CVPSEGTQLH WRVLASKPSG NFVYNCAVMG C

Arabidopsis Description

F-box/kelch-repeat protein At1g74510 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA63]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.