Factsheet for Bra026838.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33755	Canola	cytosol	29.48	97.56
CDY33754	Canola	nucleus	57.49	93.6
AT1G14330.1	Thale cress	nucleus	84.28	77.78
Bra017407.1-P	Field mustard	nucleus, plastid	76.9	71.3
Bra024801.1-P	Field mustard	nucleus	78.13	70.2
Bra026575.1-P	Field mustard	nucleus	75.68	69.37
Solyc04g005870.1.1	Tomato	cytosol	8.35	64.15
TraesCS4D01G286700.1	Wheat	cytosol	50.86	62.73
Solyc04g005670.1.1	Tomato	cytosol	60.44	60.89
TraesCS4A01G493800.1	Wheat	cytosol	36.85	59.76
PGSC0003DMT400007346	Potato	nucleus	62.9	59.12
Bra016297.1-P	Field mustard	cytosol	59.95	57.28
GSMUA_Achr4P09990_001	Banana	cytosol	58.97	55.94
Os02t0748300-01	Rice	cytosol	57.25	54.69
Zm00001d052253_P001	Maize	cytosol	56.76	54.61
TraesCS6D01G285100.1	Wheat	cytosol, nucleus, plastid	57.0	54.59
TraesCS6B01G334300.1	Wheat	cytosol, nucleus, plastid	57.0	54.59
GSMUA_Achr7P20970_001	Banana	cytosol	52.83	54.43
TraesCS6A01G306000.1	Wheat	cytosol	56.76	54.35
KXG30756	Sorghum	cytosol	56.76	54.35
HORVU6Hr1G075590.1	Barley	cytosol, nucleus, plastid	56.51	54.12
GSMUA_Achr8P01380_001	Banana	cytosol	50.12	53.68
GSMUA_Achr4P00520_001	Banana	cytosol	51.11	53.47
GSMUA_Achr1P21630_001	Banana	cytosol	49.39	53.32
Os03t0171600-01	Rice	cytosol	56.27	53.13
PGSC0003DMT400059324	Potato	cytosol	62.65	53.12
KXG40080	Sorghum	cytosol	55.77	53.04
TraesCS7A01G004600.1	Wheat	cytosol	47.42	53.02
Zm00001d027856_P001	Maize	cytosol	55.53	52.68
TraesCS4A01G016200.1	Wheat	cytosol	55.77	52.67
Zm00001d048310_P001	Maize	cytosol	55.28	52.57
Bra008155.1-P	Field mustard	cytosol	38.08	52.19
Zm00001d014203_P001	Maize	cytosol, nucleus, plastid	56.51	51.92
HORVU4Hr1G075310.1	Barley	cytosol	55.77	51.71
TraesCS7D01G005100.1	Wheat	cytosol	27.03	51.16
TraesCS7D01G007100.1	Wheat	cytosol	46.68	51.08
Bra015905.1-P	Field mustard	cytosol	51.6	50.97
OQU91835	Sorghum	cytosol, nucleus, plastid	55.53	50.9
Zm00001d033012_P001	Maize	cytosol	55.53	50.67
GSMUA_Achr8P17960_001	Banana	nucleus	50.61	49.52
Bra003796.1-P	Field mustard	cytosol	51.84	49.41
VIT_01s0026g02080.t01	Wine grape	nucleus	65.11	48.98
KRH74828	Soybean	cytosol	63.88	48.42
KRH45883	Soybean	cytosol	63.88	48.24
KRH70694	Soybean	cytosol	63.64	48.05
GSMUA_Achr10P...	Banana	nucleus	51.35	48.05
KRG99114	Soybean	cytosol	63.15	47.68
TraesCS4A01G487800.1	Wheat	cytosol	29.98	47.29
Os11t0602800-01	Rice	nucleus	49.63	46.76
PGSC0003DMT400091785	Potato	cytosol, mitochondrion, plastid	17.94	46.2
HORVU2Hr1G057150.1	Barley	cytosol	20.64	45.16
HORVU2Hr1G057140.1	Barley	cytosol	20.64	45.16
TraesCS4A01G492300.1	Wheat	cytosol, golgi, plastid	42.26	44.68
Zm00001d048898_P001	Maize	cytosol	47.67	44.6
GSMUA_Achr2P14920_001	Banana	mitochondrion	52.33	44.56
TraesCS4A01G489600.1	Wheat	cytosol	41.28	44.44
TraesCS4A01G489300.1	Wheat	cytosol	41.52	44.36
Zm00001d007596_P001	Maize	nucleus, plastid	47.67	43.99
OQU83795	Sorghum	cytosol	47.42	43.27
GSMUA_Achr3P01570_001	Banana	golgi	50.61	42.13
PGSC0003DMT400007391	Potato	cytosol	13.76	41.79
GSMUA_Achr4P24130_001	Banana	nucleus	52.83	41.59
HORVU7Hr1G000010.5	Barley	cytosol	42.51	39.5
Bra002471.1-P	Field mustard	cytosol	36.36	39.47
Solyc05g007220.2.1	Tomato	nucleus	61.67	38.98
HORVU7Hr1G000070.1	Barley	cytosol	44.23	34.29
Bra032052.1-P	Field mustard	cytosol	14.5	33.52
TraesCS4A01G491100.1	Wheat	cytosol	42.26	32.7
Bra032983.1-P	Field mustard	cytosol	30.96	30.66
TraesCS4A01G493200.1	Wheat	cytosol, plasma membrane	33.91	29.11
Bra025251.1-P	Field mustard	cytosol	30.96	29.1
Bra010784.1-P	Field mustard	cytosol	26.29	26.95
Bra034944.1-P	Field mustard	cytosol	26.54	26.41
Bra033998.1-P	Field mustard	cytosol	17.44	19.61
Bra001739.1-P	Field mustard	cytosol	16.46	19.36
Bra037535.1-P	Field mustard	cytosol	16.46	19.31
Bra004227.1-P	Field mustard	cytosol	17.69	19.3
Bra003447.1-P	Field mustard	cytosol	16.95	19.22
Bra031360.1-P	Field mustard	plastid	11.3	18.85
Bra012304.1-P	Field mustard	cytosol	21.13	18.42
Bra026073.1-P	Field mustard	cytosol	9.34	18.36
Bra007843.1-P	Field mustard	cytosol	16.46	18.01
Bra032358.1-P	Field mustard	mitochondrion, plastid	17.2	17.59
Bra030872.1-P	Field mustard	cytosol	18.67	17.47
Bra011908.1-P	Field mustard	mitochondrion	18.18	17.01
Bra037989.1-P	Field mustard	cytosol, plastid	18.18	17.01
Bra010942.1-P	Field mustard	plastid	14.25	16.81
Bra005497.1-P	Field mustard	cytosol	5.41	15.28
Bra030046.1-P	Field mustard	cytosol, plastid	11.3	13.03
Bra030045.1-P	Field mustard	cytosol	14.99	12.95

Protein Annotations

EnsemblPlants:Bra026838.1	EnsemblPlants:Bra026838.1-P	EnsemblPlantsGene:Bra026838	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413	PANTHER:PTHR24413:SF138	PFAM:PF01344	SEG:seg
SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI0002542E04	UniProt:M4EDH8	MapMan:35.1	:

Description

AT1G14330 (E=3e-162) | kelch repeat-containing F-box family protein

Coordinates

chrA09:+:33932891..33934114

Molecular Weight (calculated)

45303.0 Da

IEP (calculated)

7.669

GRAVY (calculated)

-0.384

Length

407 amino acids

Sequence
(BLAST)

001: MVEDRTHLLS RVFSSSRPSE SNWDHMYPPQ EEDSLKNGKR ALDDDDDELK DDLRHTKSRK LSDDDSLIND IIGRDISISC LIRCSRSDYP SIASLNRSFR
101: SLVKSGAIYK LRRQNRIIEH WVYFSCQLLE WVAFDPVERR WMNLPTMRSG DTFMCTDKES LAVGTDLLVL GKDDGSSHVV YRYSLLTNSW SPGKKMNSPR
201: CLFGSASLGE IAIFAGGCDS LGKISDVAEM YNSELQTWTT LPKMNKPRKM CSGVFMDGKF YVIGGVGGGE EYDLAAKKWT EIPEMSPPRS KEMPASAEAP
301: PLVAVVSNEL YAADHAGMVV RKYDKGSKKW FTLGRLPERA GSVNGWGLAF RACGERLIVI GGPKSSGGGF IELNSWIPTS GGSPPVWTLL DRKHSSNFVY
401: NCAVMGC

Best Arabidopsis Sequence Match ( AT1G14330.1 )
(BLAST)

001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C

Arabidopsis Description

At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.