Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G489600.1 | Wheat | cytosol | 98.43 | 99.21 |
| TraesCS7D01G005100.1 | Wheat | cytosol | 45.41 | 80.47 |
| TraesCS4A01G492300.1 | Wheat | cytosol, golgi, plastid | 77.95 | 77.14 |
| TraesCS4A01G487800.1 | Wheat | cytosol | 51.71 | 76.36 |
| HORVU2Hr1G057150.1 | Barley | cytosol | 33.33 | 68.28 |
| HORVU2Hr1G057140.1 | Barley | cytosol | 33.33 | 68.28 |
| HORVU7Hr1G000010.5 | Barley | cytosol | 72.7 | 63.24 |
| TraesCS4A01G493800.1 | Wheat | cytosol | 40.68 | 61.75 |
| TraesCS7A01G004600.1 | Wheat | cytosol | 56.69 | 59.34 |
| HORVU7Hr1G000070.1 | Barley | cytosol | 75.33 | 54.67 |
| TraesCS4A01G491100.1 | Wheat | cytosol | 74.02 | 53.61 |
| TraesCS4A01G016200.1 | Wheat | cytosol | 60.1 | 53.13 |
| Os03t0171600-01 | Rice | cytosol | 58.79 | 51.97 |
| Zm00001d048310_P001 | Maize | cytosol | 58.01 | 51.64 |
| KXG40080 | Sorghum | cytosol | 57.48 | 51.17 |
| Zm00001d027856_P001 | Maize | cytosol | 57.22 | 50.82 |
| GSMUA_Achr1P21630_001 | Banana | cytosol | 45.67 | 46.15 |
| TraesCS4A01G493200.1 | Wheat | cytosol, plasma membrane | 56.69 | 45.57 |
| TraesCS6A01G306000.1 | Wheat | cytosol | 49.34 | 44.24 |
| GSMUA_Achr8P01380_001 | Banana | cytosol | 44.09 | 44.21 |
| CDY33755 | Canola | cytosol | 13.65 | 42.28 |
| Solyc04g005670.1.1 | Tomato | cytosol | 44.36 | 41.83 |
| Bra026838.1-P | Field mustard | nucleus | 44.36 | 41.52 |
| CDX81631 | Canola | nucleus | 44.36 | 41.32 |
| CDY60836 | Canola | cytosol | 41.21 | 41.32 |
| CDY62015 | Canola | nucleus | 44.36 | 40.72 |
| VIT_17s0000g05920.t01 | Wine grape | cytosol | 47.24 | 40.63 |
| KRH54527 | Soybean | cytosol | 46.72 | 40.36 |
| PGSC0003DMT400007346 | Potato | nucleus | 45.67 | 40.18 |
| KRH03453 | Soybean | cytosol | 42.78 | 39.95 |
| KRH63378 | Soybean | cytosol | 46.19 | 39.91 |
| PGSC0003DMT400091785 | Potato | cytosol, mitochondrion, plastid | 16.54 | 39.87 |
| CDY49094 | Canola | nucleus | 44.36 | 39.86 |
| KRH56929 | Soybean | cytosol | 42.52 | 39.8 |
| GSMUA_Achr10P... | Banana | nucleus | 45.41 | 39.77 |
| Solyc03g113010.1.1 | Tomato | cytosol | 45.41 | 39.23 |
| AT1G14330.1 | Thale cress | nucleus | 45.41 | 39.23 |
| GSMUA_Achr8P17960_001 | Banana | nucleus | 42.78 | 39.18 |
| CDY17425 | Canola | cytosol | 40.94 | 38.9 |
| Bra026575.1-P | Field mustard | nucleus | 45.14 | 38.74 |
| AT1G26930.1 | Thale cress | cytosol | 42.78 | 38.72 |
| CDY09349 | Canola | nucleus | 44.88 | 38.51 |
| CDY62176 | Canola | nucleus | 45.14 | 38.48 |
| Bra017407.1-P | Field mustard | nucleus, plastid | 44.09 | 38.27 |
| CDY52764 | Canola | cytosol | 42.52 | 38.12 |
| CDY46430 | Canola | cytosol | 42.52 | 38.03 |
| PGSC0003DMT400046591 | Potato | extracellular | 45.41 | 37.94 |
| Bra016297.1-P | Field mustard | cytosol | 42.26 | 37.79 |
| Solyc04g005870.1.1 | Tomato | cytosol | 5.25 | 37.74 |
| CDY03028 | Canola | cytosol | 44.36 | 37.64 |
| Bra024801.1-P | Field mustard | nucleus | 44.62 | 37.53 |
| CDY45190 | Canola | nucleus | 44.62 | 37.53 |
| CDY16205 | Canola | nucleus | 41.21 | 37.12 |
| AT2G02870.1 | Thale cress | nucleus | 45.14 | 36.83 |
| GSMUA_Achr2P14920_001 | Banana | mitochondrion | 45.67 | 36.4 |
| GSMUA_Achr3P01570_001 | Banana | golgi | 45.93 | 35.79 |
| CDY33754 | Canola | nucleus | 23.36 | 35.6 |
| TraesCS2A01G462600.1 | Wheat | cytosol | 41.47 | 35.19 |
| PGSC0003DMT400059324 | Potato | cytosol | 43.83 | 34.79 |
| GSMUA_Achr4P24130_001 | Banana | nucleus | 45.93 | 33.85 |
| VIT_01s0026g02080.t01 | Wine grape | nucleus | 46.72 | 32.9 |
| KRH70694 | Soybean | cytosol | 45.14 | 31.91 |
| KRH74828 | Soybean | cytosol | 44.88 | 31.84 |
| KRH45883 | Soybean | cytosol | 44.88 | 31.73 |
| KRG99114 | Soybean | cytosol | 44.62 | 31.54 |
| PGSC0003DMT400007391 | Potato | cytosol | 9.97 | 28.36 |
| Solyc05g007220.2.1 | Tomato | nucleus | 43.31 | 25.62 |
| TraesCS3A01G534600.1 | Wheat | cytosol | 21.26 | 18.79 |
| TraesCS3A01G446400.1 | Wheat | cytosol, plastid | 18.64 | 18.44 |
| TraesCS5A01G544300.1 | Wheat | extracellular, plasma membrane | 13.65 | 18.18 |
| TraesCS4A01G020200.1 | Wheat | cytosol | 20.47 | 18.14 |
| TraesCS6A01G211500.1 | Wheat | extracellular, golgi | 14.17 | 17.53 |
| TraesCS2A01G280900.1 | Wheat | mitochondrion | 17.32 | 17.23 |
| TraesCS6A01G175700.1 | Wheat | plastid | 18.9 | 17.02 |
| TraesCS4A01G472100.1 | Wheat | cytosol | 19.68 | 16.38 |
| TraesCS7A01G496600.1 | Wheat | cytosol | 16.27 | 16.1 |
| TraesCS7A01G020100.1 | Wheat | cytosol, plastid | 19.16 | 16.01 |
| TraesCS6A01G037900.1 | Wheat | cytosol | 15.22 | 15.98 |
| TraesCS2A01G499700.1 | Wheat | cytosol, mitochondrion | 16.27 | 15.58 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G489300.1 | EnsemblPlantsGene:TraesCS4A01G489300 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF133 | PFAM:PF01344 |
| SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr4A:+:740307129..740308387
Molecular Weight (calculated)
42482.4 Da
IEP (calculated)
6.510
GRAVY (calculated)
-0.318
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVVIRISSR SPESSSLLHP PDGGEQHDLV SWSNTIGVIG RDLFIYCLHR LSRWEYGAIA SLNHDFNSVV RNGDIYRLRR MNGVAEHWIY LSACSNNPPE
101: WEAYDPSTGR WIQLPKMPPA ESIFIWESLA VGTELLVFGD RGRVALRYNI LTNSWTWLAD AMNTPRIAFG SASVGEKAYV AGGVDSSIKI LSSVEMYDSE
201: THTWTPLPSL NRARFRCSGA FMDGKFYVIG GLTSSNEVLT CGEEYDLNRR SWRVIHNMSQ GLNQTXXXXW GALPLIAVVK NELYGADYSK NNDLRQYDKM
301: DNKWITLGKL PVQSKKEGKD MGFRACDDRL IVIGPPNNST DENVVELHSW NPDGQPPVWS LFATRPYREG WIQSTCAMMG C
101: WEAYDPSTGR WIQLPKMPPA ESIFIWESLA VGTELLVFGD RGRVALRYNI LTNSWTWLAD AMNTPRIAFG SASVGEKAYV AGGVDSSIKI LSSVEMYDSE
201: THTWTPLPSL NRARFRCSGA FMDGKFYVIG GLTSSNEVLT CGEEYDLNRR SWRVIHNMSQ GLNQTXXXXW GALPLIAVVK NELYGADYSK NNDLRQYDKM
301: DNKWITLGKL PVQSKKEGKD MGFRACDDRL IVIGPPNNST DENVVELHSW NPDGQPPVWS LFATRPYREG WIQSTCAMMG C
001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C
Arabidopsis Description
At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.