Factsheet for TraesCS2A01G462600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G463000.1	Wheat	cytosol	97.55	97.99
TraesCS2B01G484200.1	Wheat	cytosol	97.1	97.1
HORVU2Hr1G103880.2	Barley	cytosol	94.65	95.29
KXG27134	Sorghum	cytosol	53.23	88.85
Zm00001d026321_P001	Maize	cytosol	81.29	81.47
Os04t0619300-01	Rice	cytosol, extracellular	85.97	81.09
OQU82347	Sorghum	mitochondrion	84.41	80.3
Zm00001d002284_P003	Maize	mitochondrion	83.52	76.84
GSMUA_Achr3P23350_001	Banana	cytosol, extracellular	63.03	70.22
VIT_16s0039g01470.t01	Wine grape	cytosol	58.8	68.75
GSMUA_Achr9P30470_001	Banana	cytosol	58.8	67.52
Solyc11g069320.1.1	Tomato	plastid	31.85	65.6
KRH26429	Soybean	cytosol	49.89	61.54
GSMUA_Achr11P...	Banana	cytosol	57.46	58.64
KRH22905	Soybean	cytosol	50.33	58.1
PGSC0003DMT400020936	Potato	cytosol	49.89	57.73
KRH29930	Soybean	cytosol	43.43	56.2
KRH24879	Soybean	cytosol	49.44	55.92
Zm00001d007538_P001	Maize	cytosol	36.97	55.89
AT5G60570.2	Thale cress	cytosol	48.11	54.96
CDX80156	Canola	cytosol	45.88	54.35
Bra002471.1-P	Field mustard	cytosol	45.21	54.13
CDY31534	Canola	cytosol	45.21	54.13
KRH12864	Soybean	cytosol, plasma membrane	38.31	52.92
TraesCS4A01G493800.1	Wheat	cytosol	29.4	52.59
Zm00001d019862_P001	Maize	cytosol	73.27	48.1
TraesCS6A01G306000.1	Wheat	cytosol	44.77	47.29
TraesCS7A01G004600.1	Wheat	cytosol	38.08	46.98
TraesCS4A01G487800.1	Wheat	cytosol	26.5	46.12
TraesCS4A01G016200.1	Wheat	cytosol	43.65	45.48
TraesCS4A01G492300.1	Wheat	cytosol, golgi, plastid	35.63	41.56
TraesCS4A01G489600.1	Wheat	cytosol	34.97	41.53
TraesCS4A01G489300.1	Wheat	cytosol	35.19	41.47
TraesCS4A01G491100.1	Wheat	cytosol	33.18	28.33
TraesCS4A01G493200.1	Wheat	cytosol, plasma membrane	29.84	28.27
TraesCS3A01G534600.1	Wheat	cytosol	21.6	22.51
TraesCS4A01G020200.1	Wheat	cytosol	20.71	21.63
TraesCS6A01G175700.1	Wheat	plastid	19.15	20.33
TraesCS3A01G446400.1	Wheat	cytosol, plastid	17.15	20.0
TraesCS6A01G211500.1	Wheat	extracellular, golgi	12.92	18.83
TraesCS4A01G472100.1	Wheat	cytosol	18.93	18.56
TraesCS2A01G280900.1	Wheat	mitochondrion	15.59	18.28
TraesCS7A01G020100.1	Wheat	cytosol, plastid	18.49	18.2
TraesCS6A01G037900.1	Wheat	cytosol	14.03	17.36
TraesCS2A01G499700.1	Wheat	cytosol, mitochondrion	14.7	16.58
TraesCS5A01G544300.1	Wheat	extracellular, plasma membrane	10.24	16.08
TraesCS7A01G496600.1	Wheat	cytosol	12.92	15.06

Protein Annotations

EnsemblPlants:TraesCS2A01G462600.1	EnsemblPlantsGene:TraesCS2A01G462600	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413	PANTHER:PTHR24413:SF150	PFAM:PF01344
SEG:seg	SMART:SM00612	SUPFAM:SSF117281	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2A:+:708184730..708186079

Molecular Weight (calculated)

49819.1 Da

IEP (calculated)

6.679

GRAVY (calculated)

-0.280

Length

449 amino acids

Sequence
(BLAST)

001: MEDLQDCNSK SLVAVPGSLV LHLFRLLGQQ DNSWQKYALA YFLLVRNEYF PREPRKSSAV NGQLVPCCDS SDLGSNELEV EKQNAVVKSQ SGGDSSSNGS
101: NDCFLPGLHD DLAQDCLAWT SRSDYPSLSC LNKKFNTLVN GGYLYKLRRK YGIVEHWVYL ACSAMPWEAF DPSRNRWMRL PRMPCDDCFS CADKESLAVG
201: TQLLVFGREY TGLAIWMYNL LTRHWSRCTP MNLPRCLFAS GSSGEIAIVA GGCDRDGQVL RSVELYNSEA GQWETLPDMN LPRRLSSGFF MDGKFYVIGG
301: VTSERHSLTC GEEFDLDTRT WRRIHNMYPG GTSASQSPPL IAVVNNQLYA ADQSTNVVKK YDKASNTWNI VKPLPVRADS SNGWGLAFKG CGDRLLVIGG
401: HRGPRGEVIL LHSWCPEDGN GAGAAADWEV LSVKERAGVF VYNCAIMGC

Best Arabidopsis Sequence Match ( AT5G60570.2 )
(BLAST)

001: MAAEEHSNKR REVSASASAS ASASVVVNLR VGEEDNDGHR LRLGSSDSVL PGLIDDVALN CLAWVPRSDY PSLSCVNKKY NKLINSGHLF ALRKELGIVE
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC

Arabidopsis Description

F-box/kelch-repeat protein At5g60570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.