Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G005100.1 | Wheat | cytosol | 65.5 | 78.6 |
| HORVU2Hr1G057140.1 | Barley | cytosol | 48.06 | 66.67 |
| HORVU2Hr1G057150.1 | Barley | cytosol | 48.06 | 66.67 |
| TraesCS4A01G493800.1 | Wheat | cytosol | 59.3 | 60.96 |
| TraesCS4A01G492300.1 | Wheat | cytosol, golgi, plastid | 78.29 | 52.47 |
| TraesCS4A01G489600.1 | Wheat | cytosol | 76.36 | 52.12 |
| TraesCS4A01G489300.1 | Wheat | cytosol | 76.36 | 51.71 |
| HORVU7Hr1G000010.5 | Barley | cytosol | 79.46 | 46.8 |
| CDY33755 | Canola | cytosol | 20.54 | 43.09 |
| TraesCS7A01G004600.1 | Wheat | cytosol | 60.08 | 42.58 |
| PGSC0003DMT400091785 | Potato | cytosol, mitochondrion, plastid | 25.58 | 41.77 |
| HORVU7Hr1G000070.1 | Barley | cytosol | 80.23 | 39.43 |
| TraesCS4A01G016200.1 | Wheat | cytosol | 64.34 | 38.52 |
| Zm00001d048310_P001 | Maize | cytosol | 62.79 | 37.85 |
| Os03t0171600-01 | Rice | cytosol | 63.18 | 37.82 |
| KXG40080 | Sorghum | cytosol | 62.4 | 37.62 |
| Zm00001d027856_P001 | Maize | cytosol | 61.63 | 37.06 |
| TraesCS4A01G491100.1 | Wheat | cytosol | 74.42 | 36.5 |
| Solyc04g005870.1.1 | Tomato | cytosol | 7.36 | 35.85 |
| GSMUA_Achr1P21630_001 | Banana | cytosol | 49.61 | 33.95 |
| TraesCS6A01G306000.1 | Wheat | cytosol | 53.88 | 32.71 |
| GSMUA_Achr8P01380_001 | Banana | cytosol | 48.06 | 32.63 |
| Solyc04g005670.1.1 | Tomato | cytosol | 48.45 | 30.94 |
| VIT_17s0000g05920.t01 | Wine grape | cytosol | 51.94 | 30.25 |
| Bra026838.1-P | Field mustard | nucleus | 47.29 | 29.98 |
| GSMUA_Achr10P... | Banana | nucleus | 50.39 | 29.89 |
| CDX81631 | Canola | nucleus | 47.29 | 29.83 |
| KRH03453 | Soybean | cytosol | 46.9 | 29.66 |
| CDY60836 | Canola | cytosol | 43.41 | 29.47 |
| KRH63378 | Soybean | cytosol | 50.0 | 29.25 |
| KRH56929 | Soybean | cytosol | 46.12 | 29.24 |
| PGSC0003DMT400007346 | Potato | nucleus | 48.84 | 29.1 |
| GSMUA_Achr8P17960_001 | Banana | nucleus | 46.9 | 29.09 |
| KRH54527 | Soybean | cytosol | 49.61 | 29.02 |
| CDY62015 | Canola | nucleus | 46.51 | 28.92 |
| AT1G14330.1 | Thale cress | nucleus | 49.22 | 28.8 |
| AT1G26930.1 | Thale cress | cytosol | 46.9 | 28.74 |
| Solyc03g113010.1.1 | Tomato | cytosol | 48.84 | 28.57 |
| CDY52764 | Canola | cytosol | 46.9 | 28.47 |
| CDY46430 | Canola | cytosol | 46.9 | 28.4 |
| CDY49094 | Canola | nucleus | 46.51 | 28.3 |
| Bra016297.1-P | Field mustard | cytosol | 46.51 | 28.17 |
| TraesCS4A01G493200.1 | Wheat | cytosol, plasma membrane | 51.55 | 28.06 |
| Bra017407.1-P | Field mustard | nucleus, plastid | 47.67 | 28.02 |
| Bra026575.1-P | Field mustard | nucleus | 48.06 | 27.93 |
| CDY62176 | Canola | nucleus | 48.06 | 27.74 |
| CDY09349 | Canola | nucleus | 47.67 | 27.7 |
| CDY17425 | Canola | cytosol | 43.02 | 27.68 |
| PGSC0003DMT400046591 | Potato | extracellular | 48.84 | 27.63 |
| CDY16205 | Canola | nucleus | 44.57 | 27.19 |
| CDY45190 | Canola | nucleus | 47.67 | 27.15 |
| Bra024801.1-P | Field mustard | nucleus | 47.67 | 27.15 |
| CDY03028 | Canola | cytosol | 46.9 | 26.95 |
| PGSC0003DMT400007391 | Potato | cytosol | 13.95 | 26.87 |
| GSMUA_Achr2P14920_001 | Banana | mitochondrion | 49.61 | 26.78 |
| TraesCS2A01G462600.1 | Wheat | cytosol | 46.12 | 26.5 |
| GSMUA_Achr3P01570_001 | Banana | golgi | 49.61 | 26.18 |
| AT2G02870.1 | Thale cress | nucleus | 47.29 | 26.12 |
| PGSC0003DMT400059324 | Potato | cytosol | 46.9 | 25.21 |
| GSMUA_Achr4P24130_001 | Banana | nucleus | 50.0 | 24.95 |
| KRG99114 | Soybean | cytosol | 50.39 | 24.12 |
| KRH45883 | Soybean | cytosol | 50.39 | 24.12 |
| KRH70694 | Soybean | cytosol | 50.0 | 23.93 |
| VIT_01s0026g02080.t01 | Wine grape | nucleus | 49.61 | 23.66 |
| KRH74828 | Soybean | cytosol | 49.22 | 23.65 |
| Solyc05g007220.2.1 | Tomato | nucleus | 47.29 | 18.94 |
| TraesCS6A01G211500.1 | Wheat | extracellular, golgi | 19.38 | 16.23 |
| CDY33754 | Canola | nucleus | 15.5 | 16.0 |
| TraesCS5A01G544300.1 | Wheat | extracellular, plasma membrane | 17.44 | 15.73 |
| TraesCS3A01G446400.1 | Wheat | cytosol, plastid | 21.32 | 14.29 |
| TraesCS3A01G534600.1 | Wheat | cytosol | 22.87 | 13.69 |
| TraesCS7A01G496600.1 | Wheat | cytosol | 19.77 | 13.25 |
| TraesCS4A01G020200.1 | Wheat | cytosol | 21.71 | 13.02 |
| TraesCS6A01G037900.1 | Wheat | cytosol | 17.83 | 12.67 |
| TraesCS2A01G280900.1 | Wheat | mitochondrion | 18.6 | 12.53 |
| TraesCS4A01G472100.1 | Wheat | cytosol | 21.71 | 12.23 |
| TraesCS2A01G499700.1 | Wheat | cytosol, mitochondrion | 18.6 | 12.06 |
| TraesCS6A01G175700.1 | Wheat | plastid | 19.77 | 12.06 |
| TraesCS7A01G020100.1 | Wheat | cytosol, plastid | 20.93 | 11.84 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G487800.1 | EnsemblPlantsGene:TraesCS4A01G487800 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF133 | PFAM:PF01344 |
| SMART:SM00612 | SUPFAM:SSF117281 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4A:+:739870131..739870907
Molecular Weight (calculated)
28771.1 Da
IEP (calculated)
5.116
GRAVY (calculated)
-0.345
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPAQNVIWD SLAIGTELLL FGEGWRMRYS ILTNSWTGLV DEMNTPRFSF GSASVGEKAY VVGGADYSRN VLSSAEMYDS EAHTWTPLPS MNRARYKCSG
101: AFMDGKFYVI GGLNSSHEVL TCGEEYDLNR RSWRVIDNMS QGLNNIAMGV PPLIVVLKNE LYAADYSENN ELKQYDKLDN KWTTLGKLPV QSKNKDGLDM
201: GFQACGDRLI VIGPPKNSSD EKVVELHSWT PDGQPPVWNL FATRSYRGNW IASAVMGC
101: AFMDGKFYVI GGLNSSHEVL TCGEEYDLNR RSWRVIDNMS QGLNNIAMGV PPLIVVLKNE LYAADYSENN ELKQYDKLDN KWTTLGKLPV QSKNKDGLDM
201: GFQACGDRLI VIGPPKNSSD EKVVELHSWT PDGQPPVWNL FATRSYRGNW IASAVMGC
001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C
Arabidopsis Description
At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.