CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45883	Soybean	cytosol	92.76	92.76
KRH74828	Soybean	cytosol	75.88	76.16
KRH70694	Soybean	cytosol	74.58	74.58
Solyc04g005870.1.1	Tomato	cytosol	7.24	73.58
CDY33755	Canola	cytosol	16.33	71.54
Solyc04g005670.1.1	Tomato	cytosol	52.69	70.3
PGSC0003DMT400007346	Potato	nucleus	55.29	68.82
TraesCS4D01G286700.1	Wheat	cytosol	40.82	66.67
AT1G14330.1	Thale cress	nucleus	52.32	63.95
Bra017407.1-P	Field mustard	nucleus, plastid	51.95	63.78
CDY62015	Canola	nucleus	48.98	63.61
CDY60836	Canola	cytosol	44.71	63.42
TraesCS4A01G493800.1	Wheat	cytosol	29.5	63.35
Bra026838.1-P	Field mustard	nucleus	47.68	63.15
Bra026575.1-P	Field mustard	nucleus	51.76	62.84
CDX81631	Canola	nucleus	47.68	62.84
CDY09349	Canola	nucleus	51.58	62.61
AT1G26930.1	Thale cress	cytosol	48.79	62.47
CDY49094	Canola	nucleus	48.98	62.26
KRH63378	Soybean	cytosol	50.83	62.13
CDY62176	Canola	nucleus	51.39	61.97
KRH54527	Soybean	cytosol	50.65	61.9
CDY17425	Canola	cytosol	46.01	61.85
Bra024801.1-P	Field mustard	nucleus	51.58	61.37
CDY45190	Canola	nucleus	51.58	61.37
CDY03028	Canola	cytosol	51.02	61.25
AT2G02870.1	Thale cress	nucleus	53.06	61.24
PGSC0003DMT400059324	Potato	cytosol	54.36	61.04
CDY52764	Canola	cytosol	48.05	60.94
Bra016297.1-P	Field mustard	cytosol	48.05	60.8
CDY46430	Canola	cytosol	48.05	60.8
CDY16205	Canola	nucleus	47.68	60.76
GSMUA_Achr4P09990_001	Banana	cytosol	47.87	60.14
VIT_01s0026g02080.t01	Wine grape	nucleus	59.93	59.7
GSMUA_Achr7P20970_001	Banana	cytosol	43.6	59.49
KXG30756	Sorghum	cytosol	46.75	59.29
TraesCS6D01G285100.1	Wheat	cytosol, nucleus, plastid	46.2	58.59
Zm00001d052253_P001	Maize	cytosol	45.83	58.39
HORVU6Hr1G075590.1	Barley	cytosol, nucleus, plastid	46.01	58.35
TraesCS6A01G306000.1	Wheat	cytosol	46.01	58.35
TraesCS6B01G334300.1	Wheat	cytosol, nucleus, plastid	46.01	58.35
GSMUA_Achr4P00520_001	Banana	cytosol	41.56	57.58
Os02t0748300-01	Rice	cytosol	45.27	57.28
GSMUA_Achr8P01380_001	Banana	cytosol	40.26	57.11
KRH03453	Soybean	cytosol	42.86	56.62
TraesCS4A01G016200.1	Wheat	cytosol	45.27	56.61
Zm00001d048310_P001	Maize	cytosol	44.71	56.31
KXG40080	Sorghum	cytosol	44.53	56.07
Os03t0171600-01	Rice	cytosol	44.71	55.92
GSMUA_Achr1P21630_001	Banana	cytosol	38.96	55.7
TraesCS7A01G004600.1	Wheat	cytosol	37.48	55.49
HORVU4Hr1G075310.1	Barley	cytosol	45.08	55.35
Zm00001d027856_P001	Maize	cytosol	43.78	55.01
TraesCS7D01G005100.1	Wheat	cytosol	21.52	53.95
KRH56929	Soybean	cytosol	40.63	53.81
CDY33754	Canola	nucleus	24.68	53.2
OQU91835	Sorghum	cytosol, nucleus, plastid	43.6	52.93
Zm00001d033012_P001	Maize	cytosol	43.78	52.91
Zm00001d014203_P001	Maize	cytosol, nucleus, plastid	43.41	52.82
TraesCS7D01G007100.1	Wheat	cytosol	36.36	52.69
PGSC0003DMT400091785	Potato	cytosol, mitochondrion, plastid	15.21	51.9
GSMUA_Achr8P17960_001	Banana	nucleus	39.52	51.2
TraesCS4A01G487800.1	Wheat	cytosol	24.12	50.39
GSMUA_Achr10P...	Banana	nucleus	40.63	50.34
KRH29930	Soybean	cytosol	31.91	49.57
KRH26429	Soybean	cytosol	33.21	49.18
HORVU2Hr1G057140.1	Barley	cytosol	16.7	48.39
HORVU2Hr1G057150.1	Barley	cytosol	16.7	48.39
GSMUA_Achr2P14920_001	Banana	mitochondrion	42.67	48.12
Os11t0602800-01	Rice	nucleus	38.4	47.92
KRH24879	Soybean	cytosol	35.06	47.61
Zm00001d048898_P001	Maize	cytosol	38.4	47.59
KRH22905	Soybean	cytosol	33.95	47.04
TraesCS4A01G492300.1	Wheat	cytosol, golgi, plastid	33.21	46.49
OQU83795	Sorghum	cytosol	38.4	46.41
Zm00001d007596_P001	Maize	nucleus, plastid	37.66	46.03
Solyc05g007220.2.1	Tomato	nucleus	54.55	45.65
KRH12864	Soybean	cytosol, plasma membrane	27.27	45.23
PGSC0003DMT400007391	Potato	cytosol	11.13	44.78
TraesCS4A01G489600.1	Wheat	cytosol	31.35	44.71
TraesCS4A01G489300.1	Wheat	cytosol	31.54	44.62
GSMUA_Achr3P01570_001	Banana	golgi	39.7	43.76
GSMUA_Achr4P24130_001	Banana	nucleus	41.93	43.71
HORVU7Hr1G000010.5	Barley	cytosol	32.84	40.41
HORVU7Hr1G000070.1	Barley	cytosol	35.25	36.19
TraesCS4A01G491100.1	Wheat	cytosol	34.32	35.17
KRH06951	Soybean	cytosol	26.16	34.9
KRG94518	Soybean	mitochondrion	25.79	34.66
KRH57678	Soybean	cytosol	23.19	31.73
TraesCS4A01G493200.1	Wheat	cytosol, plasma membrane	27.27	31.01
KRH42654	Soybean	cytosol	15.4	21.39
KRH31463	Soybean	cytosol	15.03	21.04
KRH11716	Soybean	cytosol, golgi, plastid	14.47	20.97
KRH42810	Soybean	cytosol	16.7	20.59
KRH67237	Soybean	cytosol	13.17	20.58
KRG97442	Soybean	cytosol, nucleus, peroxisome	14.1	20.54
KRH48153	Soybean	cytosol	13.54	20.17
KRH58897	Soybean	cytosol	16.33	20.14
KRG93237	Soybean	cytosol	15.96	20.09
KRG95556	Soybean	cytosol	12.8	20.0
KRH56558	Soybean	cytosol	15.77	19.86
KRH72270	Soybean	cytosol	4.82	19.85
KRH48154	Soybean	cytosol	13.54	19.84
KRH48156	Soybean	cytosol	13.17	19.61
KRG93186	Soybean	cytosol	14.47	19.6
KRH32035	Soybean	cytosol	12.43	19.48
KRH71403	Soybean	cytosol	12.43	19.48
KRH36711	Soybean	cytosol	14.29	19.11
KRH18847	Soybean	cytosol	16.7	18.95
KRH62415	Soybean	cytosol	9.65	18.84
KRH65052	Soybean	cytosol	11.13	18.75
KRH42190	Soybean	cytosol, plastid	16.33	18.3
KRH58301	Soybean	cytosol	16.33	18.3
KRH16647	Soybean	cytosol, plastid	16.14	18.24
KRH53131	Soybean	cytosol	15.77	17.86
KRH11179	Soybean	mitochondrion, plastid	12.8	17.04
KRH21075	Soybean	mitochondrion	12.62	16.79
KRH61941	Soybean	plastid	10.76	16.52
KRH65051	Soybean	cytosol	9.83	16.16
KRH52601	Soybean	extracellular, golgi	11.69	15.79
KRH55297	Soybean	cytosol	8.53	15.7

Protein Annotations

EntrezGene:100799870	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02010967	EnsemblPlantsGene:GLYMA_18G122000	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019005
GO:GO:0019538	GO:GO:0030162	GO:GO:0031625	GO:GO:0042787	GO:GO:0043161	UniProt:I1N167
InterPro:IPR015915	EnsemblPlants:KRG99114	ProteinID:KRG99114	ProteinID:KRG99114.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
PFAM:PF01344	PANTHER:PTHR24413	PANTHER:PTHR24413:SF138	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI000233E6E7
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:15464871..15467459

Molecular Weight (calculated)

60867.3 Da

IEP (calculated)

4.679

GRAVY (calculated)

-0.571

Length

539 amino acids

Sequence
(BLAST)

001: MLEGRSCVVP RLFPSSCQAD DKWPFMTYLP DLDIKNGKRP LDPDGEEEPQ SRKANRRVDS HHQGKTTQFL FQQQSCHADD SVVPQMDWDW RKGCESLSNW
101: QRVEKTEAFS AQLLDEREPH CTGDSLVVST DLQSNKQEED QSEDSSDSGV QQSNEQQMEQ EVEGDLLDAS DQQPLEDQEE HHGGDSSDSS SLLPCMNWDN
201: SIACLSHCSR SDYGSLASLN RSFWNTIRSG ELYRWRRLNG IIEHWIYFSC ALLEWEAYDP IRERWMHLPR MASNECFMCS DKESLAVGTE LLVFGREMRS
301: HVIYRYSLLT NSWTSGMRMN APRCLFGSAS LGEIAILAGG CDLDGHIMDS AELYNSENQT WVLLPSMNKP RKMCSGVFMD GKFYVIGGIG GKDSKLLTCG
401: EEYNLQTRTW TEIPNMSPGR SARGAEMPAT AEAPPLVAVV NNELYAADYA DTEVKKYDKE RRVWVTIGRL PERAVSMNGW GLAFRACGDM LIVISGPRTH
501: GEGFIELNSW VPSEGPPQWN LLARKRSGNF VYNCAVMGC

Best Arabidopsis Sequence Match ( AT2G02870.2 )
(BLAST)

001: MLEDRSPDSC LSTRVFSSSR LSESNWSNSY MYPEDDDKLL GNGKRALEVV GEVRQTKSLK LMGFSIIYDS DSSDYSLSGG EEQADAAIGD GSSSRQEQEQ
101: QSDFNDNGGD SSDSHSLINE IGRDNSIDCL IRCSRSDYGS IASLNRNFRS LVKSGEIYRL RRQNGFVEHW VYFSCQLLEW VAFDPVERRW MQLPTMPSSV
201: TFMCADKESL AVGTDLLVLG KDDFSSHVIY RYSLLTNSWS SGMKMNSPRC LFGSASLGEI AIFAGGCDSQ GKILDFAEMY NSELQTWITL PRMNKPRKMC
301: SGVFMDGKFY VIGGIGGADS KGLTCGEEYD LETKKWTQIP DLSPPRSRAD QADMSPAAEA PPLVAVVNNQ LYAADHADME VRKYDKENKK WLTVGRLPER
401: AGSVNGWGLA FRACGERLIV IGGPKCSGGG FIELNSWIPS DGGPPQWTLL DRKHSPTFVY NCAVMGC

Arabidopsis Description

SKIP11F-box/kelch-repeat protein SKIP11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L736]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.