CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11716	Soybean	cytosol, golgi, plastid	81.14	87.9
KRH42810	Soybean	cytosol	68.24	62.93
KRH58897	Soybean	cytosol	68.24	62.93
VIT_06s0004g00860.t01	Wine grape	cytosol	63.77	58.81
PGSC0003DMT400081852	Potato	cytosol	61.79	56.98
Solyc01g005970.2.1	Tomato	cytosol	61.54	56.75
PGSC0003DMT400034149	Potato	cytosol	59.8	55.15
Solyc01g022740.2.1	Tomato	cytosol	59.55	54.92
AT1G55270.1	Thale cress	mitochondrion	58.56	54.38
KRH56558	Soybean	cytosol	57.32	53.97
Bra011908.1-P	Field mustard	mitochondrion	57.57	53.33
CDY26117	Canola	cytosol	57.57	53.33
CDY08233	Canola	mitochondrion	57.32	53.1
KRG93237	Soybean	cytosol	56.33	53.04
CDY10574	Canola	cytosol	56.58	52.41
CDY02451	Canola	cytosol	56.58	52.41
Bra030872.1-P	Field mustard	cytosol	56.33	52.18
GSMUA_Achr7P27010_001	Banana	cytosol	53.6	51.92
GSMUA_Achr3P29560_001	Banana	cytosol	52.11	51.09
CDY33062	Canola	mitochondrion, plastid	54.34	50.34
CDY24045	Canola	mitochondrion	54.09	50.11
KRG93186	Soybean	cytosol	49.13	49.75
Bra037989.1-P	Field mustard	cytosol, plastid	53.35	49.43
TraesCS4D01G282200.1	Wheat	cytosol	50.87	49.16
TraesCS1B01G154600.1	Wheat	plastid	53.1	48.86
EER91632	Sorghum	plastid	52.85	48.74
Zm00001d032991_P001	Maize	cytosol	52.61	48.51
Os10t0409900-01	Rice	plastid	52.85	48.19
Os03t0167800-02	Rice	cytosol	52.11	47.95
TraesCS4A01G020200.1	Wheat	cytosol	50.87	47.67
HORVU4Hr1G074720.7	Barley	plasma membrane	51.36	47.15
TraesCS3B01G611700.1	Wheat	cytosol	49.88	47.07
TraesCS4B01G283400.1	Wheat	cytosol	50.12	46.98
TraesCS4B01G283500.1	Wheat	cytosol	50.12	46.87
TraesCS3D01G540000.1	Wheat	cytosol	49.63	46.84
EER95442	Sorghum	mitochondrion	50.87	46.8
Zm00001d027827_P001	Maize	cytosol, mitochondrion, nucleus	50.62	46.47
TraesCS3A01G534600.1	Wheat	cytosol	48.88	45.71
TraesCS1D01G136700.1	Wheat	nucleus	52.61	45.4
HORVU1Hr1G035200.1	Barley	plasma membrane	52.85	44.84
HORVU3Hr1G116690.2	Barley	mitochondrion	50.37	41.68
GSMUA_Achr4P03630_001	Banana	plasma membrane	50.37	23.91
KRG97442	Soybean	cytosol, nucleus, peroxisome	21.34	23.24
KRH11179	Soybean	mitochondrion, plastid	23.08	22.96
KRH48156	Soybean	cytosol	20.6	22.93
KRH31463	Soybean	cytosol	21.84	22.86
KRH26429	Soybean	cytosol	20.6	22.8
KRH21075	Soybean	mitochondrion	22.58	22.47
KRH42654	Soybean	cytosol	21.59	22.42
KRH48153	Soybean	cytosol	20.1	22.38
KRH32035	Soybean	cytosol	18.86	22.09
KRH71403	Soybean	cytosol	18.61	21.8
KRH48154	Soybean	cytosol	19.85	21.74
KRH65052	Soybean	cytosol	17.12	21.56
KRH18847	Soybean	cytosol	25.31	21.47
KRH67237	Soybean	cytosol	18.36	21.45
KRG95556	Soybean	cytosol	18.36	21.45
KRH58301	Soybean	cytosol	25.56	21.41
KRH16647	Soybean	cytosol, plastid	25.31	21.38
KRH42190	Soybean	cytosol, plastid	24.81	20.79
KRH65051	Soybean	cytosol	16.87	20.73
KRH53131	Soybean	cytosol	24.32	20.59
KRH22905	Soybean	cytosol	19.85	20.57
KRH62415	Soybean	cytosol	13.9	20.29
KRH24879	Soybean	cytosol	19.11	19.4
KRH12864	Soybean	cytosol, plasma membrane	15.38	19.08
KRH57678	Soybean	cytosol	18.61	19.04
KRH29930	Soybean	cytosol	16.13	18.73
KRH72270	Soybean	cytosol	5.71	17.56
KRG94518	Soybean	mitochondrion	17.12	17.21
KRH61941	Soybean	plastid	14.89	17.09
KRH52601	Soybean	extracellular, golgi	16.87	17.04
KRH03453	Soybean	cytosol	17.12	16.91
KRH06951	Soybean	cytosol	16.87	16.83
KRH56929	Soybean	cytosol	16.87	16.71
KRH55297	Soybean	cytosol	11.41	15.7
KRH63378	Soybean	cytosol	17.12	15.65
KRH54527	Soybean	cytosol	17.12	15.65
KRH74828	Soybean	cytosol	19.6	14.71
KRH70694	Soybean	cytosol	19.6	14.66
KRH45883	Soybean	cytosol	19.35	14.47
KRG99114	Soybean	cytosol	19.11	14.29

Protein Annotations

Gene3D:2.120.10.80	MapMan:9.2.1.1.3	EMBL:ACUP02005388	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_09G019400
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031463	UniProt:I1L0A2	InterPro:IPR001810
InterPro:IPR015915	EnsemblPlants:KRH36711	ProteinID:KRH36711	ProteinID:KRH36711.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
PFAM:PF00646	PFAM:PF01344	PANTHER:PTHR24412	PANTHER:PTHR24412:SF234	SMART:SM00612	SUPFAM:SSF117281
SUPFAM:SSF81383	UniParc:UPI00023CA54A	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:1517755..1520516

Molecular Weight (calculated)

45691.1 Da

IEP (calculated)

8.887

GRAVY (calculated)

-0.241

Length

403 amino acids

Sequence
(BLAST)

001: MRMRENTPRE TTRVQPPLLS GLPDDLAIAC LIRVPRIEHR KLHLVCKRWH RLLSEDFFYS LRKSLGMAEE WLYVIKADRA GRISVHAFDP IYQLWQPLPP
101: VPGDFPEAMW VGSAVLSGCH LYLFGGVDLE GSRSIRRVIF YNVCTNKWHR APDMLQKRNL FRSCVINNCL FVAGGELEGI QMTRSAEVYD PSQNRWSFIS
201: EMRTSMVPLF GFVHNGTWFF KGNEIGSGNS MCEAYSPETD TWTPVTNGMV NGRGNDCISL NGQLYALGCP DGCKLTVYDR ATDSWKKLID SKLHVDKFPS
301: LVAVAPVSLN GKLCIIRHNM SISLVDVSSP NQQLESNPQD LWENIAGKAQ HIRRSLVRKL WSTIARRDFS KVALFAVRCY KPENKISPDN ISYAAKETGL
401: FGN

Best Arabidopsis Sequence Match ( AT1G55270.1 )
(BLAST)

001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA

Arabidopsis Description

F-box/kelch-repeat protein At1g55270 [Source:UniProtKB/Swiss-Prot;Acc:Q93W93]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.