Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02451 | Canola | cytosol | 99.08 | 99.08 |
| Bra030872.1-P | Field mustard | cytosol | 98.85 | 98.85 |
| CDY26117 | Canola | cytosol | 97.24 | 97.24 |
| CDY08233 | Canola | mitochondrion | 96.55 | 96.55 |
| AT1G55270.1 | Thale cress | mitochondrion | 95.86 | 96.08 |
| CDY33062 | Canola | mitochondrion, plastid | 88.97 | 88.97 |
| CDY24045 | Canola | mitochondrion | 88.74 | 88.74 |
| VIT_06s0004g00860.t01 | Wine grape | cytosol | 79.54 | 79.18 |
| Solyc01g005970.2.1 | Tomato | cytosol | 78.85 | 78.49 |
| PGSC0003DMT400081852 | Potato | cytosol | 78.16 | 77.8 |
| PGSC0003DMT400034149 | Potato | cytosol | 76.55 | 76.2 |
| Solyc01g022740.2.1 | Tomato | cytosol | 76.09 | 75.74 |
| KRH42810 | Soybean | cytosol | 75.4 | 75.06 |
| KRH58897 | Soybean | cytosol | 75.17 | 74.83 |
| GSMUA_Achr7P27010_001 | Banana | cytosol | 68.74 | 71.88 |
| GSMUA_Achr3P29560_001 | Banana | cytosol | 67.82 | 71.78 |
| Zm00001d032991_P001 | Maize | cytosol | 70.11 | 69.79 |
| EER91632 | Sorghum | plastid | 69.2 | 68.88 |
| Os10t0409900-01 | Rice | plastid | 69.89 | 68.78 |
| Os03t0167800-02 | Rice | cytosol | 69.2 | 68.72 |
| TraesCS1B01G154600.1 | Wheat | plastid | 68.51 | 68.04 |
| TraesCS4D01G282200.1 | Wheat | cytosol | 63.68 | 66.43 |
| TraesCS4A01G020200.1 | Wheat | cytosol | 65.52 | 66.28 |
| TraesCS3D01G540000.1 | Wheat | cytosol | 64.83 | 66.04 |
| TraesCS3B01G611700.1 | Wheat | cytosol | 64.6 | 65.81 |
| TraesCS4B01G283400.1 | Wheat | cytosol | 64.6 | 65.35 |
| TraesCS3A01G534600.1 | Wheat | cytosol | 63.91 | 64.5 |
| HORVU4Hr1G074720.7 | Barley | plasma membrane | 65.06 | 64.46 |
| TraesCS4B01G283500.1 | Wheat | cytosol | 63.68 | 64.27 |
| EER95442 | Sorghum | mitochondrion | 64.6 | 64.16 |
| TraesCS1D01G136700.1 | Wheat | nucleus | 68.05 | 63.38 |
| Zm00001d027827_P001 | Maize | cytosol, mitochondrion, nucleus | 63.91 | 63.33 |
| KRH11716 | Soybean | cytosol, golgi, plastid | 54.02 | 63.17 |
| HORVU1Hr1G035200.1 | Barley | plasma membrane | 67.82 | 62.11 |
| HORVU3Hr1G116690.2 | Barley | mitochondrion | 64.37 | 57.49 |
| KRH36711 | Soybean | cytosol | 52.41 | 56.58 |
| GSMUA_Achr4P03630_001 | Banana | plasma membrane | 60.92 | 31.21 |
| CDY01301 | Canola | cytosol | 10.57 | 29.3 |
| CDY12647 | Canola | cytosol | 22.07 | 26.52 |
| CDX99882 | Canola | mitochondrion, plastid | 23.68 | 25.88 |
| CDY26295 | Canola | mitochondrion, plastid | 23.45 | 25.63 |
| CDX96091 | Canola | cytosol | 21.84 | 25.47 |
| CDX90085 | Canola | plastid | 20.0 | 25.22 |
| CDY11811 | Canola | plastid | 20.0 | 25.22 |
| CDY01812 | Canola | cytosol | 21.61 | 25.2 |
| CDY04697 | Canola | cytosol | 12.87 | 25.11 |
| CDY30645 | Canola | nucleus | 12.87 | 25.11 |
| CDY15708 | Canola | cytosol | 19.77 | 25.07 |
| CDY52247 | Canola | cytosol | 18.16 | 24.69 |
| CDY03923 | Canola | cytosol | 18.85 | 24.26 |
| CDY66857 | Canola | cytosol | 19.77 | 24.16 |
| CDY70128 | Canola | cytosol | 18.62 | 24.04 |
| CDY58793 | Canola | cytosol | 19.77 | 23.96 |
| CDY36145 | Canola | cytosol | 19.08 | 23.71 |
| CDY64382 | Canola | plastid | 18.62 | 23.68 |
| CDY51562 | Canola | cytosol | 19.31 | 23.4 |
| CDY64883 | Canola | golgi, plastid | 22.07 | 23.36 |
| CDY58259 | Canola | cytosol | 18.62 | 23.34 |
| CDX99248 | Canola | cytosol | 18.62 | 23.28 |
| CDY18573 | Canola | cytosol | 18.39 | 22.99 |
| CDX76807 | Canola | cytosol | 19.31 | 22.76 |
| CDY34765 | Canola | cytosol | 19.31 | 22.58 |
| CDX82306 | Canola | cytosol | 17.7 | 22.25 |
| CDY22982 | Canola | cytosol | 17.7 | 22.25 |
| CDY70379 | Canola | cytosol | 8.05 | 22.15 |
| CDY35074 | Canola | cytosol | 10.57 | 22.01 |
| CDX81755 | Canola | cytosol | 19.54 | 21.79 |
| CDY54825 | Canola | cytosol | 9.66 | 21.76 |
| CDY17172 | Canola | cytosol | 7.13 | 21.53 |
| CDX96822 | Canola | extracellular, vacuole | 20.92 | 21.06 |
| CDY31534 | Canola | cytosol | 17.93 | 20.8 |
| CDY15707 | Canola | cytosol, plastid | 16.78 | 20.68 |
| CDX80156 | Canola | cytosol | 17.93 | 20.58 |
| CDY33348 | Canola | cytosol | 8.51 | 20.56 |
| CDY33754 | Canola | nucleus | 11.49 | 20.0 |
| CDY60836 | Canola | cytosol | 17.47 | 20.0 |
| CDY01300 | Canola | cytosol | 10.11 | 19.64 |
| CDX82682 | Canola | cytosol | 14.02 | 19.49 |
| CDY28493 | Canola | cytosol | 18.39 | 19.46 |
| CDY17425 | Canola | cytosol | 17.93 | 19.45 |
| CDY66938 | Canola | cytosol, mitochondrion | 7.82 | 19.32 |
| CDY62015 | Canola | nucleus | 18.39 | 19.28 |
| CDY34175 | Canola | cytosol | 18.16 | 19.22 |
| CDY49094 | Canola | nucleus | 18.39 | 18.87 |
| CDX81631 | Canola | nucleus | 17.7 | 18.83 |
| CDY46430 | Canola | cytosol | 18.16 | 18.54 |
| CDY13683 | Canola | cytosol | 18.39 | 18.48 |
| CDY52395 | Canola | cytosol | 18.39 | 18.48 |
| CDY52764 | Canola | cytosol | 17.93 | 18.35 |
| CDY00415 | Canola | mitochondrion | 8.97 | 18.22 |
| CDY16205 | Canola | nucleus | 17.7 | 18.2 |
| CDY53460 | Canola | cytosol | 7.36 | 18.18 |
| CDX90239 | Canola | cytosol | 16.55 | 18.14 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 14.71 | 18.13 |
| CDY45190 | Canola | nucleus | 18.85 | 18.1 |
| CDY65956 | Canola | cytosol | 7.82 | 18.09 |
| CDY09349 | Canola | nucleus | 18.39 | 18.02 |
| CDY49979 | Canola | cytosol | 16.78 | 17.89 |
| CDY03028 | Canola | cytosol | 18.39 | 17.82 |
| CDY62176 | Canola | nucleus | 18.16 | 17.67 |
| CDY36146 | Canola | cytosol | 16.78 | 17.51 |
| CDY35075 | Canola | cytosol | 7.36 | 17.39 |
| CDX68177 | Canola | cytosol | 16.55 | 17.27 |
| CDY63005 | Canola | cytosol | 16.55 | 17.27 |
| CDY69929 | Canola | cytosol | 16.55 | 17.27 |
| CDX96551 | Canola | cytosol | 16.09 | 17.24 |
| CDX85842 | Canola | cytosol | 16.55 | 16.86 |
| CDY64780 | Canola | cytosol | 16.78 | 16.82 |
| CDX73096 | Canola | cytosol | 15.17 | 16.46 |
| CDY12345 | Canola | cytosol | 16.32 | 15.6 |
| CDY49977 | Canola | cytosol | 15.63 | 14.47 |
| CDY33755 | Canola | cytosol | 3.91 | 13.82 |
Protein Annotations
| Gene3D:1.20.1280.50 | Gene3D:2.120.10.80 | MapMan:9.2.1.1.3 | UniProt:A0A078FCB0 | EnsemblPlants:CDY10574 | ProteinID:CDY10574 |
| ProteinID:CDY10574.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:GSBRNA2T00032537001 | InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF00646 |
| PFAM:PF01344 | PANTHER:PTHR24412 | PANTHER:PTHR24412:SF234 | SMART:SM00256 | SMART:SM00612 | SUPFAM:SSF117281 |
| SUPFAM:SSF81383 | UniParc:UPI0004EE6E28 | SEG:seg | : | : | : |
Description
BnaC03g70400DBnaC03g70400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCB0]
Coordinates
chrLK032004:+:479078..481104
Molecular Weight (calculated)
49259.3 Da
IEP (calculated)
9.998
GRAVY (calculated)
-0.414
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRSKNSKR ERTRIQPPLL PGLPDDLAVA CLIRVPRSDH
101: RKLRLVCKRW YRLASGNFFY SQRKLLKMSE EWVYVFKRDR DGKISWNTFD PVSQYPQPLP PVPREYSEAV GFGCAVLSGC HLYLFGGKDP LRGSMRRVIF
201: YNARTNKWHR APDMLRKRHF FGCCVINNCL YVAGGECEGI QRTLRSAEVY DPNKNRWSFV ADMSTAMVPL IGVVYDKKWF LKGLGSHQQV MSEAYDPESN
301: SWSPVSDGMV TGWRNPCTSL NGRLYGLDCR DGCKLRVFDE STDSWNKFMD SKVHLGNSKA LEAAALVPLN NKLCIIRNNM SMSLVDVSNP DKNNSRVWEN
401: IAVKGQSKGI LSNIWSSIAG RAVKSHIVHC QVLQA
101: RKLRLVCKRW YRLASGNFFY SQRKLLKMSE EWVYVFKRDR DGKISWNTFD PVSQYPQPLP PVPREYSEAV GFGCAVLSGC HLYLFGGKDP LRGSMRRVIF
201: YNARTNKWHR APDMLRKRHF FGCCVINNCL YVAGGECEGI QRTLRSAEVY DPNKNRWSFV ADMSTAMVPL IGVVYDKKWF LKGLGSHQQV MSEAYDPESN
301: SWSPVSDGMV TGWRNPCTSL NGRLYGLDCR DGCKLRVFDE STDSWNKFMD SKVHLGNSKA LEAAALVPLN NKLCIIRNNM SMSLVDVSNP DKNNSRVWEN
401: IAVKGQSKGI LSNIWSSIAG RAVKSHIVHC QVLQA
001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA
Arabidopsis Description
F-box/kelch-repeat protein At1g55270 [Source:UniProtKB/Swiss-Prot;Acc:Q93W93]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.