Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90239 | Canola | cytosol | 68.72 | 81.36 |
| CDY49979 | Canola | cytosol | 69.15 | 79.66 |
| CDY66938 | Canola | cytosol, mitochondrion | 20.85 | 55.68 |
| CDY53460 | Canola | cytosol | 19.57 | 52.27 |
| CDX82682 | Canola | cytosol | 34.04 | 51.12 |
| CDY64780 | Canola | cytosol | 47.02 | 50.92 |
| CDY36146 | Canola | cytosol | 44.47 | 50.12 |
| CDY69929 | Canola | cytosol | 44.47 | 50.12 |
| CDY63005 | Canola | cytosol | 44.26 | 49.88 |
| CDY65956 | Canola | cytosol | 19.79 | 49.47 |
| AT5G40680.1 | Thale cress | mitochondrion | 42.55 | 48.19 |
| CDY34175 | Canola | cytosol | 41.49 | 47.45 |
| CDY28493 | Canola | cytosol | 40.64 | 46.47 |
| CDY12345 | Canola | cytosol | 44.89 | 46.37 |
| CDY52395 | Canola | cytosol | 41.06 | 44.57 |
| CDY13683 | Canola | cytosol | 40.64 | 44.11 |
| KRH57678 | Soybean | cytosol | 33.19 | 39.59 |
| PGSC0003DMT400021985 | Potato | nucleus | 33.83 | 38.13 |
| KRH06951 | Soybean | cytosol | 32.77 | 38.12 |
| KRG94518 | Soybean | mitochondrion | 32.34 | 37.91 |
| VIT_14s0068g02150.t01 | Wine grape | cytosol | 35.96 | 35.43 |
| Solyc07g009410.2.1 | Tomato | cytosol | 26.17 | 27.58 |
| CDY31534 | Canola | cytosol | 21.49 | 26.93 |
| CDX80156 | Canola | cytosol | 21.49 | 26.65 |
| CDY33755 | Canola | cytosol | 6.81 | 26.02 |
| CDY60836 | Canola | cytosol | 19.79 | 24.47 |
| CDY62015 | Canola | nucleus | 21.28 | 24.1 |
| CDX68177 | Canola | cytosol | 21.28 | 23.98 |
| CDY62176 | Canola | nucleus | 22.77 | 23.94 |
| CDY09349 | Canola | nucleus | 22.55 | 23.87 |
| CDY49094 | Canola | nucleus | 21.49 | 23.82 |
| CDX85842 | Canola | cytosol | 21.49 | 23.65 |
| CDY52764 | Canola | cytosol | 21.28 | 23.53 |
| CDY46430 | Canola | cytosol | 21.28 | 23.47 |
| CDX81631 | Canola | nucleus | 20.43 | 23.47 |
| CDY17425 | Canola | cytosol | 19.79 | 23.19 |
| CDX73096 | Canola | cytosol | 19.79 | 23.19 |
| CDY16205 | Canola | nucleus | 20.85 | 23.17 |
| CDX96551 | Canola | cytosol | 19.57 | 22.66 |
| CDY45190 | Canola | nucleus | 21.49 | 22.3 |
| CDY03028 | Canola | cytosol | 21.06 | 22.05 |
| CDY33754 | Canola | nucleus | 9.79 | 18.4 |
| CDY70379 | Canola | cytosol | 5.96 | 17.72 |
| CDY58259 | Canola | cytosol | 12.77 | 17.29 |
| CDY18573 | Canola | cytosol | 12.77 | 17.24 |
| CDY30645 | Canola | nucleus | 7.87 | 16.59 |
| CDY01301 | Canola | cytosol | 5.53 | 16.56 |
| CDY26117 | Canola | cytosol | 15.32 | 16.55 |
| CDY08233 | Canola | mitochondrion | 15.32 | 16.55 |
| CDY22982 | Canola | cytosol | 12.13 | 16.47 |
| CDX82306 | Canola | cytosol | 12.13 | 16.47 |
| CDX99248 | Canola | cytosol | 12.13 | 16.38 |
| CDY04697 | Canola | cytosol | 7.66 | 16.14 |
| CDY24045 | Canola | mitochondrion | 14.89 | 16.09 |
| CDY33062 | Canola | mitochondrion, plastid | 14.89 | 16.09 |
| CDY02451 | Canola | cytosol | 14.47 | 15.63 |
| CDY10574 | Canola | cytosol | 14.47 | 15.63 |
| CDY33348 | Canola | cytosol | 5.96 | 15.56 |
| CDY03923 | Canola | cytosol | 11.06 | 15.38 |
| CDX81755 | Canola | cytosol | 12.77 | 15.38 |
| CDX96822 | Canola | extracellular, vacuole | 14.04 | 15.28 |
| CDY64382 | Canola | plastid | 11.06 | 15.2 |
| CDY15708 | Canola | cytosol | 10.85 | 14.87 |
| CDY35074 | Canola | cytosol | 6.6 | 14.83 |
| CDY12647 | Canola | cytosol | 11.28 | 14.64 |
| CDY66857 | Canola | cytosol | 11.06 | 14.61 |
| CDX99882 | Canola | mitochondrion, plastid | 12.34 | 14.57 |
| CDY26295 | Canola | mitochondrion, plastid | 12.13 | 14.32 |
| CDY51562 | Canola | cytosol | 10.85 | 14.21 |
| CDY11811 | Canola | plastid | 10.43 | 14.2 |
| CDX90085 | Canola | plastid | 10.43 | 14.2 |
| CDY35075 | Canola | cytosol | 5.53 | 14.13 |
| CDY52247 | Canola | cytosol | 9.57 | 14.06 |
| CDY70128 | Canola | cytosol | 10.0 | 13.95 |
| CDY01812 | Canola | cytosol | 11.06 | 13.94 |
| CDY58793 | Canola | cytosol | 10.64 | 13.93 |
| CDX96091 | Canola | cytosol | 10.85 | 13.67 |
| CDY54825 | Canola | cytosol | 5.53 | 13.47 |
| CDY34765 | Canola | cytosol | 10.64 | 13.44 |
| CDY36145 | Canola | cytosol | 10.0 | 13.43 |
| CDX76807 | Canola | cytosol | 10.21 | 13.01 |
| CDY64883 | Canola | golgi, plastid | 11.06 | 12.65 |
| CDY17172 | Canola | cytosol | 3.83 | 12.5 |
| CDY15707 | Canola | cytosol, plastid | 8.72 | 11.61 |
| CDY01300 | Canola | cytosol | 5.53 | 11.61 |
| CDY00415 | Canola | mitochondrion | 4.89 | 10.75 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 7.66 | 10.2 |
Protein Annotations
| EnsemblPlants:CDY49977 | EnsemblPlantsGene:GSBRNA2T00094174001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF160 | PFAM:PF01344 |
| ProteinID:CDY49977 | ProteinID:CDY49977.1 | SEG:seg | SUPFAM:SSF117281 | UniParc:UPI0004EE5B84 | UniProt:A0A078IJ73 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC03g76170DBnaC03g76170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJ73]
Coordinates
chrLK032872:-:83076..87763
Molecular Weight (calculated)
53185.6 Da
IEP (calculated)
6.708
GRAVY (calculated)
-0.163
Length
470 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKLPIIGTM PIILDMDADS SPDSKGEEMG ETAHSHACLT SQNAYQTAPQ LLYELQVEIF ARVPCCEYWK LQFLNNQFSQ LLKSSEIFRT RRELGLVKPY
101: FFILSSSDRR WTMFDEDFKS FQRLPKLSSD INFFSGDKET ICVGTQLIVI WRNKEGITVW RYELAMHKWF KGPEMITPRI MFASASHGTN AFFAGGFTIS
201: ENGVEVLCSG CFLRGKFYVL GGQNENNENL TCAESYDEET NSWELIPDML ADMSLSIFQA PPRIAVVNDT LYLLETSLNE LRVYNVNTNT WKKLGTIPVM
301: AHLTKGWGVV FKSVKDNLML IGASFNRLHS QKWGIYKSCP SPDMEEIHWE DICCRGGSLN HSILNCWRRL YLSHLSFSPL VAPVELFRWC FPFQSFEGHG
401: HHHHHHRSIA GTWSSPPSSI PQERKEENGG GGVVYYGPIS STLGKSALSG CSLFSINASI DVISFSGVLL
101: FFILSSSDRR WTMFDEDFKS FQRLPKLSSD INFFSGDKET ICVGTQLIVI WRNKEGITVW RYELAMHKWF KGPEMITPRI MFASASHGTN AFFAGGFTIS
201: ENGVEVLCSG CFLRGKFYVL GGQNENNENL TCAESYDEET NSWELIPDML ADMSLSIFQA PPRIAVVNDT LYLLETSLNE LRVYNVNTNT WKKLGTIPVM
301: AHLTKGWGVV FKSVKDNLML IGASFNRLHS QKWGIYKSCP SPDMEEIHWE DICCRGGSLN HSILNCWRRL YLSHLSFSPL VAPVELFRWC FPFQSFEGHG
401: HHHHHHRSIA GTWSSPPSSI PQERKEENGG GGVVYYGPIS STLGKSALSG CSLFSINASI DVISFSGVLL
001: MLTLGEDQIG RIGASSSWSR SKKLRVHRYE IPDLNVEPSL DWDGEETGEA TKALSSTCLK PKDADYCLLN VPQLVYELEV EILARVPRFE YWKLKLLNKG
101: FSRLLKSDEI FKVRRERGVV EPSVFMLSSG DTCWTMFDKG FGNCQKLPEL PSDICFLHGD KESLCAGTHL IVTGKEEKSI ALWRYELETS KWFKGPAMIT
201: PRILFASATC GTVVFVAGGL KIEGNGTMEV VDSVEKYDSK TKTWTLLRGM HKRRKFCSGC YLRGKFYVLG GRDENGQNLT CGESYDEKTN TWELIPDILK
301: DMSFSSVQSP PLIAVVGDDL YSLETSANEL RVYDANANSW KKLGDVPVRA KSNGGWGVAF KSLGDKLLVI GASAGPSRAE TMSVYTSRPS ANPANKLYWE
401: ESKRCCGVRF NHFILNCCVM IA
101: FSRLLKSDEI FKVRRERGVV EPSVFMLSSG DTCWTMFDKG FGNCQKLPEL PSDICFLHGD KESLCAGTHL IVTGKEEKSI ALWRYELETS KWFKGPAMIT
201: PRILFASATC GTVVFVAGGL KIEGNGTMEV VDSVEKYDSK TKTWTLLRGM HKRRKFCSGC YLRGKFYVLG GRDENGQNLT CGESYDEKTN TWELIPDILK
301: DMSFSSVQSP PLIAVVGDDL YSLETSANEL RVYDANANSW KKLGDVPVRA KSNGGWGVAF KSLGDKLLVI GASAGPSRAE TMSVYTSRPS ANPANKLYWE
401: ESKRCCGVRF NHFILNCCVM IA
Arabidopsis Description
F-box/kelch-repeat protein At3g27150 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI89]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.