CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03923	Canola	cytosol	93.27	94.38
CDY15708	Canola	cytosol	74.56	74.34
AT1G27420.1	Thale cress	cytosol, plastid	64.91	64.16
CDY11811	Canola	plastid	64.62	64.06
CDX90085	Canola	plastid	64.04	63.48
CDY15707	Canola	cytosol, plastid	63.45	61.47
CDY52247	Canola	cytosol	54.68	58.44
CDY66857	Canola	cytosol	59.06	56.74
CDY70128	Canola	cytosol	55.85	56.68
CDY54825	Canola	cytosol	30.7	54.4
CDY36145	Canola	cytosol	55.56	54.29
CDY03921	Canola	cytosol, extracellular, plasma membrane	48.25	46.74
CDY12647	Canola	cytosol	36.26	34.25
CDY01812	Canola	cytosol	36.55	33.51
CDX96091	Canola	cytosol	36.26	33.24
CDY64883	Canola	golgi, plastid	35.67	29.68
CDY58259	Canola	cytosol	19.3	19.02
CDY18573	Canola	cytosol	19.3	18.97
CDY08233	Canola	mitochondrion	23.98	18.85
CDY58793	Canola	cytosol	19.59	18.66
CDY35074	Canola	cytosol	11.4	18.66
CDY24045	Canola	mitochondrion	23.68	18.62
CDY26117	Canola	cytosol	23.68	18.62
CDY33062	Canola	mitochondrion, plastid	23.68	18.62
CDY10574	Canola	cytosol	23.68	18.62
CDY02451	Canola	cytosol	23.68	18.62
CDY51562	Canola	cytosol	19.3	18.38
CDX82306	Canola	cytosol	18.42	18.21
CDX99248	Canola	cytosol	18.42	18.1
CDX99882	Canola	mitochondrion, plastid	21.05	18.09
CDY22982	Canola	cytosol	18.13	17.92
CDY26295	Canola	mitochondrion, plastid	20.76	17.84
CDY31534	Canola	cytosol	18.71	17.07
CDX81755	Canola	cytosol	19.3	16.92
CDX80156	Canola	cytosol	18.71	16.89
CDY28493	Canola	cytosol	20.18	16.79
CDY01301	Canola	cytosol	7.6	16.56
CDY34175	Canola	cytosol	19.88	16.55
CDY65956	Canola	cytosol	9.06	16.49
CDY66938	Canola	cytosol, mitochondrion	8.48	16.48
CDY53460	Canola	cytosol	8.48	16.48
CDY46430	Canola	cytosol	20.47	16.43
CDY16205	Canola	nucleus	20.18	16.31
CDX76807	Canola	cytosol	17.54	16.26
CDY52764	Canola	cytosol	20.18	16.24
CDY01300	Canola	cytosol	10.53	16.07
CDX82682	Canola	cytosol	14.62	15.97
CDY34765	Canola	cytosol	17.25	15.86
CDX96822	Canola	extracellular, vacuole	19.88	15.74
CDY60836	Canola	cytosol	17.25	15.53
CDY13683	Canola	cytosol	19.59	15.47
CDY17172	Canola	cytosol	6.43	15.28
CDY62176	Canola	nucleus	19.88	15.21
CDY17425	Canola	cytosol	17.84	15.21
CDY62015	Canola	nucleus	18.42	15.18
CDX68177	Canola	cytosol	18.42	15.11
CDY52395	Canola	cytosol	19.01	15.01
CDY00415	Canola	mitochondrion	9.36	14.95
CDX81631	Canola	nucleus	17.84	14.91
CDY49094	Canola	nucleus	18.42	14.86
CDY33754	Canola	nucleus	10.82	14.8
CDY30645	Canola	nucleus	9.65	14.8
CDY04697	Canola	cytosol	9.65	14.8
CDX85842	Canola	cytosol	18.42	14.75
CDY09349	Canola	nucleus	19.01	14.64
CDY03028	Canola	cytosol	19.01	14.48
CDY33348	Canola	cytosol	7.6	14.44
CDY45190	Canola	nucleus	19.01	14.35
CDX73096	Canola	cytosol	16.67	14.21
CDY70379	Canola	cytosol	6.43	13.92
CDX96551	Canola	cytosol	16.37	13.79
CDY63005	Canola	cytosol	16.67	13.67
CDY69929	Canola	cytosol	16.67	13.67
CDY36146	Canola	cytosol	16.67	13.67
CDX90239	Canola	cytosol	15.79	13.6
CDY64780	Canola	cytosol	16.96	13.36
CDY49979	Canola	cytosol	15.79	13.24
CDY12345	Canola	cytosol	17.54	13.19
CDY33755	Canola	cytosol	4.68	13.01
CDY49977	Canola	cytosol	15.2	11.06
CDY35075	Canola	cytosol	5.56	10.33

Protein Annotations

EnsemblPlants:CDY64382	EnsemblPlantsGene:GSBRNA2T00041165001	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24412	PANTHER:PTHR24412:SF377	PFAM:PF13415
ProteinID:CDY64382	ProteinID:CDY64382.1	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI0004EE03AE	UniProt:A0A078JA96
MapMan:35.1	:	:	:	:	:

Description

BnaA07g36630DBnaA07g36630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JA96]

Coordinates

chrLK034452:+:14951..16148

Molecular Weight (calculated)

38658.9 Da

IEP (calculated)

4.947

GRAVY (calculated)

-0.210

Length

342 amino acids

Sequence
(BLAST)

001: MFSCSASSSW IIPGLTDDVA ALCLSRIPRS NFRLLSQVCR RWKTFLRSEH FTAVRKLTET MEEFMCVLME DKPGTSVYWE VFDSSGNKLG PIPNIPDPGP
101: LKWGYGVTVL NEKILFIGGF TGNIGTPHAS PDVYEFSPAT NSWRKLGDMN IPRYSFSLAE VDGLLYVVQG FSNDGYCLFN TEVYNPQTNQ WSLMDGPNIQ
201: VAIGFAFSFK SKLYVLDNGT ATIDMYDTKT KTWEMLESDE LAAVYSYTVV RNKVYFLDSE RPGRLGVFDP EENSWTRVFV PTEPGGFQSK LGQWNNKVLL
301: FLRGSVGKTI INDFDKEEGS NWRDCDQIKL SGYNVCSVLI KF

Best Arabidopsis Sequence Match ( AT1G27420.1 )
(BLAST)

001: MVVESSSSPI IPGLTDDVAE LCVSKIPRSS FQITSQVCRR WRSFLRSQHF AAVRKLTGTV EEFLCVLMES ECGRDVYWEV FDASGNKLGQ IPPVPGPLKR
101: GFGVAVLDGG KIVFFGGYTE VEGSGINSTT VSASADVYEF DPANNSWRKL AGMNIPRYNF AFAEVNGLLY VIRGYSTDTY SLSNAEVYNP KTNQWSLMHC
201: PNRPVWRGFA FAFSSKLYAV GNGSRFIDIY DPKTQTWEEL NSEQSVSVYS YTVVRNKVYF MDRNMPGRLG VFDPEENSWS SVFVPPREGG FWVRLGVWNN
301: KVLLFSRVCG HETLMYDLDK EKGSKWRVCD QIKPSASQLA SVLINF

Arabidopsis Description

Putative F-box/kelch-repeat protein At1g27420 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZJ3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.