Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51562 | Canola | cytosol | 95.82 | 95.82 |
| Bra003447.1-P | Field mustard | cytosol | 94.99 | 94.99 |
| AT3G61350.2 | Thale cress | cytosol | 72.98 | 73.18 |
| VIT_15s0046g02710.t01 | Wine grape | cytosol | 52.37 | 52.37 |
| VIT_15s0046g02790.t01 | Wine grape | cytosol | 38.16 | 49.64 |
| KRH48153 | Soybean | cytosol | 48.75 | 48.34 |
| KRH48154 | Soybean | cytosol | 45.96 | 44.84 |
| KRH48156 | Soybean | cytosol | 43.73 | 43.37 |
| PGSC0003DMT400000478 | Potato | nucleus | 47.35 | 42.61 |
| Solyc01g094520.2.1 | Tomato | nucleus | 47.08 | 42.36 |
| KRH65051 | Soybean | cytosol | 37.88 | 41.46 |
| KRH65052 | Soybean | cytosol | 35.93 | 40.31 |
| HORVU6Hr1G007030.1 | Barley | cytosol | 36.77 | 38.15 |
| TraesCS6A01G037900.1 | Wheat | cytosol | 38.16 | 37.74 |
| EES06149 | Sorghum | cytosol | 35.65 | 36.99 |
| Os02t0114600-02 | Rice | cytosol | 37.05 | 36.94 |
| TraesCS6B01G052900.2 | Wheat | cytosol | 39.0 | 36.65 |
| GSMUA_Achr4P20790_001 | Banana | extracellular | 38.16 | 36.34 |
| TraesCS6D01G043400.1 | Wheat | cytosol | 38.44 | 36.13 |
| Zm00001d014986_P001 | Maize | cytosol | 33.7 | 33.33 |
| CDX82306 | Canola | cytosol | 23.4 | 24.28 |
| CDY22982 | Canola | cytosol | 22.84 | 23.7 |
| CDY18573 | Canola | cytosol | 21.73 | 22.41 |
| CDY58259 | Canola | cytosol | 21.45 | 22.19 |
| CDX99248 | Canola | cytosol | 21.45 | 22.13 |
| CDY01301 | Canola | cytosol | 9.19 | 21.02 |
| CDY15708 | Canola | cytosol | 19.78 | 20.7 |
| CDX76807 | Canola | cytosol | 21.17 | 20.6 |
| CDY12647 | Canola | cytosol | 20.33 | 20.17 |
| CDY34765 | Canola | cytosol | 20.89 | 20.16 |
| CDX96091 | Canola | cytosol | 20.89 | 20.11 |
| CDY11811 | Canola | plastid | 19.22 | 20.0 |
| CDX90085 | Canola | plastid | 19.22 | 20.0 |
| CDY52247 | Canola | cytosol | 17.83 | 20.0 |
| CDY01812 | Canola | cytosol | 20.61 | 19.84 |
| CDY10574 | Canola | cytosol | 23.96 | 19.77 |
| CDY02451 | Canola | cytosol | 23.96 | 19.77 |
| CDY04697 | Canola | cytosol | 12.26 | 19.73 |
| CDY30645 | Canola | nucleus | 12.26 | 19.73 |
| CDY64382 | Canola | plastid | 18.66 | 19.59 |
| CDY03923 | Canola | cytosol | 18.38 | 19.53 |
| CDX99882 | Canola | mitochondrion, plastid | 21.45 | 19.35 |
| CDY36145 | Canola | cytosol | 18.66 | 19.14 |
| CDY35074 | Canola | cytosol | 11.14 | 19.14 |
| CDY26117 | Canola | cytosol | 23.12 | 19.08 |
| CDY08233 | Canola | mitochondrion | 22.84 | 18.85 |
| CDY26295 | Canola | mitochondrion, plastid | 20.89 | 18.84 |
| CDY70128 | Canola | cytosol | 17.55 | 18.69 |
| CDY33062 | Canola | mitochondrion, plastid | 22.56 | 18.62 |
| CDY24045 | Canola | mitochondrion | 22.56 | 18.62 |
| CDY66857 | Canola | cytosol | 18.38 | 18.54 |
| CDY64883 | Canola | golgi, plastid | 20.33 | 17.76 |
| CDX81755 | Canola | cytosol | 19.22 | 17.69 |
| CDY46430 | Canola | cytosol | 20.61 | 17.37 |
| CDY52764 | Canola | cytosol | 20.33 | 17.18 |
| CDY31534 | Canola | cytosol | 17.83 | 17.07 |
| CDY16205 | Canola | nucleus | 20.06 | 17.02 |
| CDY01300 | Canola | cytosol | 10.59 | 16.96 |
| CDX80156 | Canola | cytosol | 17.83 | 16.89 |
| CDX81631 | Canola | nucleus | 19.22 | 16.87 |
| CDY62015 | Canola | nucleus | 19.5 | 16.87 |
| CDY60836 | Canola | cytosol | 17.83 | 16.84 |
| CDY17172 | Canola | cytosol | 6.69 | 16.67 |
| CDY54825 | Canola | cytosol | 8.91 | 16.58 |
| CDY49094 | Canola | nucleus | 19.5 | 16.51 |
| CDX96822 | Canola | extracellular, vacuole | 19.78 | 16.44 |
| CDY33754 | Canola | nucleus | 11.42 | 16.4 |
| CDY00415 | Canola | mitochondrion | 9.75 | 16.36 |
| CDY33348 | Canola | cytosol | 8.08 | 16.11 |
| CDY17425 | Canola | cytosol | 17.83 | 15.96 |
| CDY45190 | Canola | nucleus | 20.06 | 15.89 |
| CDY03028 | Canola | cytosol | 19.78 | 15.81 |
| CDX96551 | Canola | cytosol | 17.83 | 15.76 |
| CDX73096 | Canola | cytosol | 17.27 | 15.46 |
| CDX68177 | Canola | cytosol | 17.27 | 14.87 |
| CDY09349 | Canola | nucleus | 18.38 | 14.86 |
| CDY62176 | Canola | nucleus | 18.38 | 14.77 |
| CDY33755 | Canola | cytosol | 5.01 | 14.63 |
| CDY28493 | Canola | cytosol | 16.71 | 14.6 |
| CDY70379 | Canola | cytosol | 6.41 | 14.56 |
| CDY52395 | Canola | cytosol | 17.55 | 14.55 |
| CDX85842 | Canola | cytosol | 17.27 | 14.52 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 14.21 | 14.45 |
| CDY34175 | Canola | cytosol | 16.43 | 14.36 |
| CDY66938 | Canola | cytosol, mitochondrion | 6.96 | 14.2 |
| CDY15707 | Canola | cytosol, plastid | 13.65 | 13.88 |
| CDY13683 | Canola | cytosol | 16.71 | 13.86 |
| CDX82682 | Canola | cytosol | 11.98 | 13.74 |
| CDY69929 | Canola | cytosol | 15.04 | 12.95 |
| CDY65956 | Canola | cytosol | 6.69 | 12.77 |
| CDY49979 | Canola | cytosol | 14.48 | 12.75 |
| CDY63005 | Canola | cytosol | 14.76 | 12.71 |
| CDX90239 | Canola | cytosol | 13.93 | 12.59 |
| CDY53460 | Canola | cytosol | 6.13 | 12.5 |
| CDY36146 | Canola | cytosol | 14.48 | 12.47 |
| CDY12345 | Canola | cytosol | 14.48 | 11.43 |
| CDY35075 | Canola | cytosol | 5.85 | 11.41 |
| CDY64780 | Canola | cytosol | 13.37 | 11.06 |
| CDY49977 | Canola | cytosol | 13.93 | 10.64 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | UniProt:A0A078J4A5 | EnsemblPlants:CDY58793 | ProteinID:CDY58793 | ProteinID:CDY58793.1 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00025146001 |
| InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF00646 | PFAM:PF01344 |
| PANTHER:PTHR24414 | PANTHER:PTHR24414:SF40 | SMART:SM00256 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI0004EF43F4 |
Description
BnaA07g38070DBnaA07g38070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4A5]
Coordinates
chrLK033699:+:32145..33734
Molecular Weight (calculated)
40128.3 Da
IEP (calculated)
7.088
GRAVY (calculated)
-0.014
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MERIVHESTN ECADQSRETQ TLLISGVPDD ISNLFLARVP RSHHMAMKCV SRRWRDFISS DDFCEYRNKF NLAESWIYAL CRHNTCGRVF LHVLNPSSSR
101: RSWRRVHEIP PHITFRDGMG FAVLGKRLFV LGGCGWVEGA SDDVYCYDAA INTWLHLQPS LSTKRCFFAC ETLDGKIMAI GGLGVNSKAP QTWDIYDPVT
201: KACVSCSDAN IVRDIEDSFV MDGKVYIRGG TGAAVYDGLS GVWKRVEDDM ASGWLGPAVV VGDDLYVLDQ SFGAALTMWC KETRMWIRIG KLSQLVMTQQ
301: CRLVAMGSNI FVIGKDCSTV VIDVENVRKK TVNGVMVCSS IPKTWDDTID VICCKSIAI
101: RSWRRVHEIP PHITFRDGMG FAVLGKRLFV LGGCGWVEGA SDDVYCYDAA INTWLHLQPS LSTKRCFFAC ETLDGKIMAI GGLGVNSKAP QTWDIYDPVT
201: KACVSCSDAN IVRDIEDSFV MDGKVYIRGG TGAAVYDGLS GVWKRVEDDM ASGWLGPAVV VGDDLYVLDQ SFGAALTMWC KETRMWIRIG KLSQLVMTQQ
301: CRLVAMGSNI FVIGKDCSTV VIDVENVRKK TVNGVMVCSS IPKTWDDTID VICCKSIAI
001: MACIVEDPQR AGQSNETQIA LISGVPDDIS KSCLARVPRE YHMAMKCVSR RWRDFVCSDE MCDYRNEFNL AESWIYALCR DISGGVFLHM LNPFSSRRSW
101: KRINDYPYIP MREGMGFAVL GKRLFVLGGC GWLEDATDEI YCYDAAMNTW FDVVPPLSTK RCYFACETLD GKIIAIGGLG LNPNAKRTWD IYDPLTRTCK
201: SCSDVNIVPE MEDSFVMDGR IYIRGGVGGS STAVYSASSG IWERMDDDMA SGWRGPAVVV AGDLYVLDQT FGAKLTMWCK DTRMWIHIGK LSQLVMKQPC
301: RLVSIGNSIF VIGKDCSTVV IDVENVRKNK MNGVMVCSSI PKTWDDDIDV ISCKSVAI
101: KRINDYPYIP MREGMGFAVL GKRLFVLGGC GWLEDATDEI YCYDAAMNTW FDVVPPLSTK RCYFACETLD GKIIAIGGLG LNPNAKRTWD IYDPLTRTCK
201: SCSDVNIVPE MEDSFVMDGR IYIRGGVGGS STAVYSASSG IWERMDDDMA SGWRGPAVVV AGDLYVLDQT FGAKLTMWCK DTRMWIHIGK LSQLVMKQPC
301: RLVSIGNSIF VIGKDCSTVV IDVENVRKNK MNGVMVCSSI PKTWDDDIDV ISCKSVAI
Arabidopsis Description
SKIP4F-box/kelch-repeat protein SKIP4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.