Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90239 | Canola | cytosol | 84.56 | 86.9 |
| CDY49977 | Canola | cytosol | 79.66 | 69.15 |
| CDY66938 | Canola | cytosol, mitochondrion | 25.25 | 58.52 |
| CDY64780 | Canola | cytosol | 61.52 | 57.83 |
| CDX82682 | Canola | cytosol | 44.12 | 57.51 |
| CDY36146 | Canola | cytosol | 57.35 | 56.12 |
| CDY69929 | Canola | cytosol | 57.35 | 56.12 |
| CDY63005 | Canola | cytosol | 57.11 | 55.88 |
| CDY53460 | Canola | cytosol | 24.02 | 55.68 |
| AT5G40680.1 | Thale cress | mitochondrion | 55.64 | 54.7 |
| CDY65956 | Canola | cytosol | 25.0 | 54.26 |
| CDY34175 | Canola | cytosol | 54.17 | 53.77 |
| CDY12345 | Canola | cytosol | 59.31 | 53.19 |
| CDY28493 | Canola | cytosol | 52.94 | 52.55 |
| CDY52395 | Canola | cytosol | 53.19 | 50.12 |
| CDY13683 | Canola | cytosol | 52.7 | 49.65 |
| KRH57678 | Soybean | cytosol | 41.91 | 43.4 |
| PGSC0003DMT400021985 | Potato | nucleus | 42.65 | 41.73 |
| KRH06951 | Soybean | cytosol | 40.2 | 40.59 |
| KRG94518 | Soybean | mitochondrion | 39.71 | 40.4 |
| VIT_14s0068g02150.t01 | Wine grape | cytosol | 45.1 | 38.57 |
| CDY33755 | Canola | cytosol | 9.07 | 30.08 |
| CDY31534 | Canola | cytosol | 27.21 | 29.6 |
| CDX80156 | Canola | cytosol | 27.21 | 29.29 |
| Solyc07g009410.2.1 | Tomato | cytosol | 31.62 | 28.92 |
| CDY60836 | Canola | cytosol | 26.23 | 28.16 |
| CDX81631 | Canola | nucleus | 26.96 | 26.89 |
| CDY62015 | Canola | nucleus | 27.21 | 26.75 |
| CDX73096 | Canola | cytosol | 26.23 | 26.68 |
| CDY49094 | Canola | nucleus | 27.7 | 26.65 |
| CDX68177 | Canola | cytosol | 27.21 | 26.62 |
| CDY17425 | Canola | cytosol | 25.98 | 26.43 |
| CDY52764 | Canola | cytosol | 27.45 | 26.35 |
| CDY09349 | Canola | nucleus | 28.68 | 26.35 |
| CDY46430 | Canola | cytosol | 27.45 | 26.29 |
| CDX85842 | Canola | cytosol | 27.45 | 26.23 |
| CDY62176 | Canola | nucleus | 28.68 | 26.17 |
| CDX96551 | Canola | cytosol | 25.98 | 26.11 |
| CDY16205 | Canola | nucleus | 26.72 | 25.77 |
| CDY70379 | Canola | cytosol | 9.8 | 25.32 |
| CDY45190 | Canola | nucleus | 27.21 | 24.5 |
| CDY03028 | Canola | cytosol | 26.72 | 24.28 |
| CDY33754 | Canola | nucleus | 13.24 | 21.6 |
| CDY58259 | Canola | cytosol | 16.67 | 19.6 |
| CDY18573 | Canola | cytosol | 16.67 | 19.54 |
| CDX99248 | Canola | cytosol | 16.18 | 18.97 |
| CDX82306 | Canola | cytosol | 15.93 | 18.79 |
| CDY22982 | Canola | cytosol | 15.69 | 18.5 |
| CDY26117 | Canola | cytosol | 18.87 | 17.7 |
| CDY08233 | Canola | mitochondrion | 18.87 | 17.7 |
| CDY30645 | Canola | nucleus | 9.56 | 17.49 |
| CDY33062 | Canola | mitochondrion, plastid | 18.38 | 17.24 |
| CDY24045 | Canola | mitochondrion | 18.38 | 17.24 |
| CDY33348 | Canola | cytosol | 7.6 | 17.22 |
| CDY01301 | Canola | cytosol | 6.62 | 17.2 |
| CDY04697 | Canola | cytosol | 9.31 | 17.04 |
| CDY12647 | Canola | cytosol | 14.95 | 16.85 |
| CDY10574 | Canola | cytosol | 17.89 | 16.78 |
| CDY02451 | Canola | cytosol | 17.89 | 16.78 |
| CDX99882 | Canola | mitochondrion, plastid | 16.18 | 16.58 |
| CDY54825 | Canola | cytosol | 7.84 | 16.58 |
| CDY52247 | Canola | cytosol | 12.99 | 16.56 |
| CDX81755 | Canola | cytosol | 15.69 | 16.41 |
| CDY26295 | Canola | mitochondrion, plastid | 15.93 | 16.33 |
| CDY34765 | Canola | cytosol | 14.71 | 16.13 |
| CDY01812 | Canola | cytosol | 14.71 | 16.09 |
| CDY03923 | Canola | cytosol | 13.24 | 15.98 |
| CDY11811 | Canola | plastid | 13.48 | 15.94 |
| CDX90085 | Canola | plastid | 13.48 | 15.94 |
| CDX96091 | Canola | cytosol | 14.46 | 15.82 |
| CDY64382 | Canola | plastid | 13.24 | 15.79 |
| CDY15708 | Canola | cytosol | 13.24 | 15.74 |
| CDX76807 | Canola | cytosol | 14.22 | 15.72 |
| CDY66857 | Canola | cytosol | 13.24 | 15.17 |
| CDY70128 | Canola | cytosol | 12.5 | 15.13 |
| CDY36145 | Canola | cytosol | 12.75 | 14.86 |
| CDX96822 | Canola | extracellular, vacuole | 15.69 | 14.81 |
| CDY51562 | Canola | cytosol | 12.99 | 14.76 |
| CDY64883 | Canola | golgi, plastid | 14.71 | 14.6 |
| CDY58793 | Canola | cytosol | 12.75 | 14.48 |
| CDY35074 | Canola | cytosol | 7.35 | 14.35 |
| CDY35075 | Canola | cytosol | 6.13 | 13.59 |
| CDY01300 | Canola | cytosol | 7.11 | 12.95 |
| CDY00415 | Canola | mitochondrion | 6.62 | 12.62 |
| CDY17172 | Canola | cytosol | 4.41 | 12.5 |
| CDY15707 | Canola | cytosol, plastid | 10.29 | 11.9 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 8.58 | 9.92 |
Protein Annotations
| EnsemblPlants:CDY49979 | EnsemblPlantsGene:GSBRNA2T00094176001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF160 | PFAM:PF01344 |
| ProteinID:CDY49979 | ProteinID:CDY49979.1 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI0004EF1F89 |
| UniProt:A0A078IKM4 | MapMan:35.1 | : | : | : | : |
Description
BnaC03g76190DBnaC03g76190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IKM4]
Coordinates
chrLK032872:-:93919..95145
Molecular Weight (calculated)
46469.4 Da
IEP (calculated)
8.587
GRAVY (calculated)
-0.202
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MSILSQSKPM KKVPIIGTMP IILDMNVDSS SASEGEESGE TKEIAQSLAC LTSQNAYHVA PQLLYELQVE IFARVPCPEY WKLQFLNKQF SQLLKSSEIF
101: RTRRELGLVK PYFFMLSSND RRWTMFDEDF KSFQRLPKLS SDINFFSGDK ETICVGTQLI VIWRNKEGIT VWRYELAMHK WFKGPEMITP RIMFGSASHG
201: TNAFFAGGFK ISKNGVEVVS IVEKYNAETK TWASIHPMHR RRKLCSGCVL RGKFYVLGGQ NENNENLTCA GRYDEETDSW ELIPNMLAGM TLSIFQAPPR
301: IAVVNGNLYL LETSLNELRV YNVNTNTWKK LGIIPVMVHL TKGWGVAFKS VKDNLMVIGA SSNRPHSQKM GTYKCYPSPD MEEIHWEELC CRGGSLKHFI
401: LNCCVMLA
101: RTRRELGLVK PYFFMLSSND RRWTMFDEDF KSFQRLPKLS SDINFFSGDK ETICVGTQLI VIWRNKEGIT VWRYELAMHK WFKGPEMITP RIMFGSASHG
201: TNAFFAGGFK ISKNGVEVVS IVEKYNAETK TWASIHPMHR RRKLCSGCVL RGKFYVLGGQ NENNENLTCA GRYDEETDSW ELIPNMLAGM TLSIFQAPPR
301: IAVVNGNLYL LETSLNELRV YNVNTNTWKK LGIIPVMVHL TKGWGVAFKS VKDNLMVIGA SSNRPHSQKM GTYKCYPSPD MEEIHWEELC CRGGSLKHFI
401: LNCCVMLA
001: MLTLGEDQIG RIGASSSWSR SKKLRVHRYE IPDLNVEPSL DWDGEETGEA TKALSSTCLK PKDADYCLLN VPQLVYELEV EILARVPRFE YWKLKLLNKG
101: FSRLLKSDEI FKVRRERGVV EPSVFMLSSG DTCWTMFDKG FGNCQKLPEL PSDICFLHGD KESLCAGTHL IVTGKEEKSI ALWRYELETS KWFKGPAMIT
201: PRILFASATC GTVVFVAGGL KIEGNGTMEV VDSVEKYDSK TKTWTLLRGM HKRRKFCSGC YLRGKFYVLG GRDENGQNLT CGESYDEKTN TWELIPDILK
301: DMSFSSVQSP PLIAVVGDDL YSLETSANEL RVYDANANSW KKLGDVPVRA KSNGGWGVAF KSLGDKLLVI GASAGPSRAE TMSVYTSRPS ANPANKLYWE
401: ESKRCCGVRF NHFILNCCVM IA
101: FSRLLKSDEI FKVRRERGVV EPSVFMLSSG DTCWTMFDKG FGNCQKLPEL PSDICFLHGD KESLCAGTHL IVTGKEEKSI ALWRYELETS KWFKGPAMIT
201: PRILFASATC GTVVFVAGGL KIEGNGTMEV VDSVEKYDSK TKTWTLLRGM HKRRKFCSGC YLRGKFYVLG GRDENGQNLT CGESYDEKTN TWELIPDILK
301: DMSFSSVQSP PLIAVVGDDL YSLETSANEL RVYDANANSW KKLGDVPVRA KSNGGWGVAF KSLGDKLLVI GASAGPSRAE TMSVYTSRPS ANPANKLYWE
401: ESKRCCGVRF NHFILNCCVM IA
Arabidopsis Description
F-box/kelch-repeat protein At3g27150 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI89]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.