Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15708 | Canola | cytosol | 61.19 | 62.97 |
| CDY03923 | Canola | cytosol | 47.03 | 49.11 |
| CDY64382 | Canola | plastid | 46.74 | 48.25 |
| CDY11811 | Canola | plastid | 43.63 | 44.64 |
| CDX90085 | Canola | plastid | 43.34 | 44.35 |
| AT1G27420.1 | Thale cress | cytosol, plastid | 43.34 | 44.22 |
| Bra030045.1-P | Field mustard | cytosol | 56.37 | 42.25 |
| CDY52247 | Canola | cytosol | 36.54 | 40.31 |
| CDY15707 | Canola | cytosol, plastid | 39.66 | 39.66 |
| CDY36145 | Canola | cytosol | 37.96 | 38.29 |
| CDY66857 | Canola | cytosol | 38.24 | 37.92 |
| CDY70128 | Canola | cytosol | 34.84 | 36.5 |
| CDY12647 | Canola | cytosol | 26.06 | 25.41 |
| CDY54825 | Canola | cytosol | 13.88 | 25.39 |
| CDX96091 | Canola | cytosol | 25.78 | 24.4 |
| CDY01812 | Canola | cytosol | 25.78 | 24.4 |
| CDY64883 | Canola | golgi, plastid | 25.78 | 22.14 |
| CDX99882 | Canola | mitochondrion, plastid | 17.56 | 15.58 |
| CDY26295 | Canola | mitochondrion, plastid | 17.28 | 15.33 |
| CDY08233 | Canola | mitochondrion | 18.7 | 15.17 |
| CDY26117 | Canola | cytosol | 18.41 | 14.94 |
| CDY02451 | Canola | cytosol | 18.13 | 14.71 |
| CDY10574 | Canola | cytosol | 18.13 | 14.71 |
| CDY17172 | Canola | cytosol | 5.95 | 14.58 |
| CDY58793 | Canola | cytosol | 14.45 | 14.21 |
| CDY01301 | Canola | cytosol | 6.23 | 14.01 |
| CDY51562 | Canola | cytosol | 14.16 | 13.93 |
| CDY33062 | Canola | mitochondrion, plastid | 17.0 | 13.79 |
| CDY24045 | Canola | mitochondrion | 17.0 | 13.79 |
| CDY30645 | Canola | nucleus | 8.5 | 13.45 |
| CDY04697 | Canola | cytosol | 8.5 | 13.45 |
| CDY35074 | Canola | cytosol | 7.65 | 12.92 |
| CDY58259 | Canola | cytosol | 11.9 | 12.1 |
| CDX99248 | Canola | cytosol | 11.9 | 12.07 |
| CDY18573 | Canola | cytosol | 11.9 | 12.07 |
| CDY28493 | Canola | cytosol | 13.88 | 11.92 |
| CDX82306 | Canola | cytosol | 11.61 | 11.85 |
| CDY31534 | Canola | cytosol | 12.46 | 11.73 |
| CDY65956 | Canola | cytosol | 6.23 | 11.7 |
| CDY34175 | Canola | cytosol | 13.6 | 11.68 |
| CDX80156 | Canola | cytosol | 12.46 | 11.61 |
| CDY22982 | Canola | cytosol | 11.33 | 11.56 |
| CDX76807 | Canola | cytosol | 11.61 | 11.11 |
| CDY60836 | Canola | cytosol | 11.9 | 11.05 |
| CDY34765 | Canola | cytosol | 11.61 | 11.02 |
| CDY53460 | Canola | cytosol | 5.38 | 10.8 |
| CDY62015 | Canola | nucleus | 12.46 | 10.6 |
| CDY52764 | Canola | cytosol | 12.75 | 10.59 |
| CDY46430 | Canola | cytosol | 12.75 | 10.56 |
| CDX81755 | Canola | cytosol | 11.61 | 10.51 |
| CDX96822 | Canola | extracellular, vacuole | 12.75 | 10.42 |
| CDY66938 | Canola | cytosol, mitochondrion | 5.1 | 10.23 |
| CDY17425 | Canola | cytosol | 11.61 | 10.22 |
| CDY16205 | Canola | nucleus | 12.18 | 10.17 |
| CDY52395 | Canola | cytosol | 12.46 | 10.16 |
| CDY13683 | Canola | cytosol | 12.46 | 10.16 |
| CDY49094 | Canola | nucleus | 12.18 | 10.14 |
| CDX81631 | Canola | nucleus | 11.61 | 10.02 |
| CDY09349 | Canola | nucleus | 12.18 | 9.68 |
| CDY62176 | Canola | nucleus | 12.18 | 9.62 |
| CDX82682 | Canola | cytosol | 8.5 | 9.58 |
| CDY45190 | Canola | nucleus | 12.18 | 9.49 |
| CDY03028 | Canola | cytosol | 11.9 | 9.35 |
| CDY33754 | Canola | nucleus | 6.52 | 9.2 |
| CDY36146 | Canola | cytosol | 10.76 | 9.11 |
| CDY63005 | Canola | cytosol | 10.76 | 9.11 |
| CDY69929 | Canola | cytosol | 10.76 | 9.11 |
| CDY64780 | Canola | cytosol | 11.05 | 8.99 |
| CDX73096 | Canola | cytosol | 10.2 | 8.98 |
| CDX90239 | Canola | cytosol | 9.92 | 8.82 |
| CDX68177 | Canola | cytosol | 10.2 | 8.63 |
| CDX96551 | Canola | cytosol | 9.92 | 8.62 |
| CDY49979 | Canola | cytosol | 9.92 | 8.58 |
| CDY12345 | Canola | cytosol | 11.05 | 8.57 |
| CDX85842 | Canola | cytosol | 10.2 | 8.43 |
| CDY49977 | Canola | cytosol | 10.2 | 7.66 |
| CDY01300 | Canola | cytosol | 4.82 | 7.59 |
| CDY35075 | Canola | cytosol | 3.68 | 7.07 |
| CDY00415 | Canola | mitochondrion | 4.25 | 7.01 |
| CDY70379 | Canola | cytosol | 3.12 | 6.96 |
| CDY33348 | Canola | cytosol | 3.4 | 6.67 |
| CDY33755 | Canola | cytosol | 2.27 | 6.5 |
Protein Annotations
| EnsemblPlants:CDY03921 | EnsemblPlantsGene:GSBRNA2T00117422001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:Gal_Oxase/kelch_b-propeller | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | PANTHER:PTHR24412 | PANTHER:PTHR24412:SF377 | ProteinID:CDY03921 |
| ProteinID:CDY03921.1 | SEG:seg | SUPFAM:SSF50965 | UniParc:UPI0004EE2ABB | MapMan:35.1 | : |
Description
BnaC07g11460D
Coordinates
chrLK031947:+:815801..818966
Molecular Weight (calculated)
39500.7 Da
IEP (calculated)
8.235
GRAVY (calculated)
0.099
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLSSLIIPG LTDDVAALCL SRIPRSNFRV LYQVCWRWKT FLMSEHFTAV RKLTGMVEEF MSVLVETVPG KKVYWEVFDS SGNKLGQIPN VPGPMKWGYG
101: VTVLGGEKIL FIGGYTGIPG GCVTNRNTPL ASADVYEFDP ATNRNISGFA FSFNSKLYAI GNGSCTVDIY DPKTKKWEEL ELAKSMSVYS YTVENSWTTV
201: FVPTVAGGFR FGVGQWNNKC AYVLNVLWLG LVCLANALNF VNLILIYVRN PPLASADVYE FNHATNSWRK LADMNIPLFT ISCFAFSFKS KLYALANASS
301: IMNIYDPKTE TWEKLSLKEL LSVSSYTLVR NIVYFLDKDL TGRLGVFDPE KNS
101: VTVLGGEKIL FIGGYTGIPG GCVTNRNTPL ASADVYEFDP ATNRNISGFA FSFNSKLYAI GNGSCTVDIY DPKTKKWEEL ELAKSMSVYS YTVENSWTTV
201: FVPTVAGGFR FGVGQWNNKC AYVLNVLWLG LVCLANALNF VNLILIYVRN PPLASADVYE FNHATNSWRK LADMNIPLFT ISCFAFSFKS KLYALANASS
301: IMNIYDPKTE TWEKLSLKEL LSVSSYTLVR NIVYFLDKDL TGRLGVFDPE KNS
001: MVVESSSSPI IPGLTDDVAE LCVSKIPRSS FQITSQVCRR WRSFLRSQHF AAVRKLTGTV EEFLCVLMES ECGRDVYWEV FDASGNKLGQ IPPVPGPLKR
101: GFGVAVLDGG KIVFFGGYTE VEGSGINSTT VSASADVYEF DPANNSWRKL AGMNIPRYNF AFAEVNGLLY VIRGYSTDTY SLSNAEVYNP KTNQWSLMHC
201: PNRPVWRGFA FAFSSKLYAV GNGSRFIDIY DPKTQTWEEL NSEQSVSVYS YTVVRNKVYF MDRNMPGRLG VFDPEENSWS SVFVPPREGG FWVRLGVWNN
301: KVLLFSRVCG HETLMYDLDK EKGSKWRVCD QIKPSASQLA SVLINF
101: GFGVAVLDGG KIVFFGGYTE VEGSGINSTT VSASADVYEF DPANNSWRKL AGMNIPRYNF AFAEVNGLLY VIRGYSTDTY SLSNAEVYNP KTNQWSLMHC
201: PNRPVWRGFA FAFSSKLYAV GNGSRFIDIY DPKTQTWEEL NSEQSVSVYS YTVVRNKVYF MDRNMPGRLG VFDPEENSWS SVFVPPREGG FWVRLGVWNN
301: KVLLFSRVCG HETLMYDLDK EKGSKWRVCD QIKPSASQLA SVLINF
Arabidopsis Description
Putative F-box/kelch-repeat protein At1g27420 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZJ3]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.