Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037535.1-P | Field mustard | cytosol | 97.7 | 97.98 |
| CDY58259 | Canola | cytosol | 96.55 | 96.83 |
| CDX82306 | Canola | cytosol | 86.21 | 86.71 |
| CDY22982 | Canola | cytosol | 85.34 | 85.84 |
| CDX99248 | Canola | cytosol | 85.34 | 85.34 |
| AT3G63220.2 | Thale cress | cytosol | 80.75 | 79.83 |
| VIT_07s0151g00770.t01 | Wine grape | cytosol | 68.68 | 69.28 |
| Solyc09g065400.1.1 | Tomato | cytosol | 68.1 | 68.7 |
| PGSC0003DMT400049746 | Potato | cytosol | 67.82 | 68.41 |
| KRH67237 | Soybean | cytosol | 66.67 | 67.25 |
| KRH71403 | Soybean | cytosol | 66.09 | 66.86 |
| KRH32035 | Soybean | cytosol | 66.09 | 66.86 |
| KRG95556 | Soybean | cytosol | 66.09 | 66.67 |
| Solyc06g008690.1.1 | Tomato | cytosol | 61.49 | 62.03 |
| PGSC0003DMT400013635 | Potato | cytosol | 61.21 | 61.74 |
| GSMUA_Achr6P24370_001 | Banana | cytosol | 56.61 | 56.77 |
| OQU82118 | Sorghum | cytosol | 55.46 | 55.46 |
| Os10t0388200-01 | Rice | cytosol | 55.17 | 55.33 |
| Zm00001d014338_P001 | Maize | cytosol | 54.89 | 54.89 |
| TraesCS6D01G195800.1 | Wheat | cytosol | 55.46 | 54.67 |
| TraesCS6B01G243200.1 | Wheat | cytosol | 55.46 | 54.67 |
| TraesCS7B01G234000.1 | Wheat | cytosol | 51.72 | 54.22 |
| TraesCS6A01G211500.1 | Wheat | extracellular, golgi | 43.97 | 49.68 |
| CDX81755 | Canola | cytosol | 29.02 | 25.9 |
| CDY35074 | Canola | cytosol | 14.94 | 24.88 |
| CDY33348 | Canola | cytosol | 12.64 | 24.44 |
| CDX76807 | Canola | cytosol | 25.86 | 24.39 |
| CDX96822 | Canola | extracellular, vacuole | 30.17 | 24.31 |
| CDY34765 | Canola | cytosol | 25.86 | 24.19 |
| CDY70379 | Canola | cytosol | 10.34 | 22.78 |
| CDY12647 | Canola | cytosol | 23.28 | 22.38 |
| CDY17172 | Canola | cytosol | 9.2 | 22.22 |
| CDY31534 | Canola | cytosol | 23.85 | 22.13 |
| CDX80156 | Canola | cytosol | 23.85 | 21.9 |
| CDY51562 | Canola | cytosol | 22.41 | 21.73 |
| CDY58793 | Canola | cytosol | 22.41 | 21.73 |
| CDY01301 | Canola | cytosol | 9.77 | 21.66 |
| CDX96091 | Canola | cytosol | 22.13 | 20.64 |
| CDY01812 | Canola | cytosol | 22.13 | 20.64 |
| CDY26295 | Canola | mitochondrion, plastid | 22.99 | 20.1 |
| CDX99882 | Canola | mitochondrion, plastid | 22.7 | 19.85 |
| CDY64883 | Canola | golgi, plastid | 23.28 | 19.71 |
| CDY64382 | Canola | plastid | 18.97 | 19.3 |
| CDY24045 | Canola | mitochondrion | 23.85 | 19.08 |
| CDY70128 | Canola | cytosol | 18.39 | 18.99 |
| CDY03923 | Canola | cytosol | 18.39 | 18.93 |
| CDX90085 | Canola | plastid | 18.68 | 18.84 |
| CDY33062 | Canola | mitochondrion, plastid | 23.28 | 18.62 |
| CDY35075 | Canola | cytosol | 9.77 | 18.48 |
| CDX96551 | Canola | cytosol | 21.55 | 18.47 |
| CDY52247 | Canola | cytosol | 16.95 | 18.44 |
| CDY10574 | Canola | cytosol | 22.99 | 18.39 |
| CDY15708 | Canola | cytosol | 18.1 | 18.37 |
| CDY36145 | Canola | cytosol | 18.39 | 18.29 |
| CDY11811 | Canola | plastid | 18.1 | 18.26 |
| CDX68177 | Canola | cytosol | 21.84 | 18.23 |
| CDY02451 | Canola | cytosol | 22.7 | 18.16 |
| CDY66857 | Canola | cytosol | 18.39 | 17.98 |
| CDX73096 | Canola | cytosol | 20.69 | 17.96 |
| CDY08233 | Canola | mitochondrion | 22.41 | 17.93 |
| CDY26117 | Canola | cytosol | 22.41 | 17.93 |
| CDY16205 | Canola | nucleus | 21.55 | 17.73 |
| CDY54825 | Canola | cytosol | 9.77 | 17.62 |
| CDX85842 | Canola | cytosol | 21.55 | 17.56 |
| CDY04697 | Canola | cytosol | 11.21 | 17.49 |
| CDY01300 | Canola | cytosol | 11.21 | 17.41 |
| CDX90239 | Canola | cytosol | 19.54 | 17.13 |
| CDY30645 | Canola | nucleus | 10.92 | 17.04 |
| CDY46430 | Canola | cytosol | 20.69 | 16.9 |
| CDY00415 | Canola | mitochondrion | 10.34 | 16.82 |
| CDY33754 | Canola | nucleus | 12.07 | 16.8 |
| CDY52764 | Canola | cytosol | 20.4 | 16.71 |
| CDY49979 | Canola | cytosol | 19.54 | 16.67 |
| CDY65956 | Canola | cytosol | 8.91 | 16.49 |
| CDY62015 | Canola | nucleus | 19.54 | 16.39 |
| CDX81631 | Canola | nucleus | 18.97 | 16.14 |
| CDY60836 | Canola | cytosol | 17.53 | 16.05 |
| CDY34175 | Canola | cytosol | 18.68 | 15.82 |
| CDY49094 | Canola | nucleus | 19.25 | 15.8 |
| CDY62176 | Canola | nucleus | 20.11 | 15.66 |
| CDX82682 | Canola | cytosol | 14.08 | 15.65 |
| CDY28493 | Canola | cytosol | 18.1 | 15.33 |
| CDY17425 | Canola | cytosol | 17.53 | 15.21 |
| CDY09349 | Canola | nucleus | 19.25 | 15.09 |
| HORVU6Hr1G007080.1 | Barley | cytosol | 3.74 | 14.94 |
| CDY03028 | Canola | cytosol | 19.25 | 14.92 |
| CDY13683 | Canola | cytosol | 18.39 | 14.78 |
| CDY15707 | Canola | cytosol, plastid | 14.94 | 14.73 |
| CDY45190 | Canola | nucleus | 18.97 | 14.57 |
| CDY52395 | Canola | cytosol | 17.82 | 14.32 |
| CDY64780 | Canola | cytosol | 17.82 | 14.29 |
| CDY63005 | Canola | cytosol | 16.95 | 14.15 |
| CDY36146 | Canola | cytosol | 16.95 | 14.15 |
| CDY69929 | Canola | cytosol | 16.95 | 14.15 |
| CDY12345 | Canola | cytosol | 18.1 | 13.85 |
| CDY49977 | Canola | cytosol | 17.24 | 12.77 |
| CDY66938 | Canola | cytosol, mitochondrion | 6.32 | 12.5 |
| CDY33755 | Canola | cytosol | 4.31 | 12.2 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 12.07 | 11.9 |
| CDY53460 | Canola | cytosol | 5.75 | 11.36 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | UniProt:A0A078G1U1 | EnsemblPlants:CDY18573 | ProteinID:CDY18573 | ProteinID:CDY18573.1 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00005621001 |
| InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF00646 | PFAM:PF01344 |
| PANTHER:PTHR24414 | PANTHER:PTHR24414:SF29 | SMART:SM00256 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 |
| UniParc:UPI0004EDBF57 | : | : | : | : | : |
Description
BnaA01g26220DBnaA01g26220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G1U1]
Coordinates
chrLK032086:+:689836..693750
Molecular Weight (calculated)
38287.2 Da
IEP (calculated)
6.820
GRAVY (calculated)
0.043
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSLLEGIP EAVALRCLAH VPLHHHPNLE LVSRSWRAAI RSRELFRVRN ELKSSESLLC VCSFDPENTW QVYSPDCDRW LTLPLLPSPI RHLAHFGAVT
101: TSGKLFVLGG GSDAVDPLTG DHDGTFATDE VWCYDFVERR WSQRASMLVP RSMFACCVLD GKIVVAGGFT TCRKSSVSGA EMYDLESDAW STIPHLNRTH
201: NSPCSGLVIR GRVHVLHKGL TTVQVLESVK LGWEVKEYGW PQGSMAVVEG VVYVLSHGVV YKEGEDETSW KVVASASEFK LRIGMAMTSL SGEVLLVGGV
301: IGPDRHWDIK PLSDVDVLTV GSDRPVWRKV APMTKCCGTV LGCTQLII
101: TSGKLFVLGG GSDAVDPLTG DHDGTFATDE VWCYDFVERR WSQRASMLVP RSMFACCVLD GKIVVAGGFT TCRKSSVSGA EMYDLESDAW STIPHLNRTH
201: NSPCSGLVIR GRVHVLHKGL TTVQVLESVK LGWEVKEYGW PQGSMAVVEG VVYVLSHGVV YKEGEDETSW KVVASASEFK LRIGMAMTSL SGEVLLVGGV
301: IGPDRHWDIK PLSDVDVLTV GSDRPVWRKV APMTKCCGTV LGCTQLII
001: MSGLLDGIPE AVALRCLAHV PLHLHPNLEL VSRSWRAAIR SHELFRVRKE LRSSEHLLCV CAFDPENIWQ VYSPNCDRWL TLPLLPSRIR HLAHFGAVTT
101: AGMLFVLGGG SDAVSPVTGD HDGTFATDQV WSYDFVQRQW TPRASMLVPR AMFACCVLQG KIVVAGGFTT CRKSISGAEM YDPENDVWTS IPDLHQTHNS
201: ACSGLVVNGK VHVLHKGLST VQVLESVKLG WDVKDYGWPQ GPMVVVEDVL YVMSHGLVFK QEGDTWKMVA SASEFKRRIG MAMTSLSDEV LIVGGVIGPD
301: RLNWDIKPLS DVDALTVGND RPAWRSVAPM TRCRGTILGC TQLTI
101: AGMLFVLGGG SDAVSPVTGD HDGTFATDQV WSYDFVQRQW TPRASMLVPR AMFACCVLQG KIVVAGGFTT CRKSISGAEM YDPENDVWTS IPDLHQTHNS
201: ACSGLVVNGK VHVLHKGLST VQVLESVKLG WDVKDYGWPQ GPMVVVEDVL YVMSHGLVFK QEGDTWKMVA SASEFKRRIG MAMTSLSDEV LIVGGVIGPD
301: RLNWDIKPLS DVDALTVGND RPAWRSVAPM TRCRGTILGC TQLTI
Arabidopsis Description
SKIP30F-box/kelch-repeat protein SKIP30 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1W7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.