CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33755	Canola	cytosol	29.83	99.19
CDY33754	Canola	nucleus	58.19	95.2
CDY62015	Canola	nucleus	87.04	85.78
CDY49094	Canola	nucleus	87.78	84.67
AT1G14330.1	Thale cress	nucleus	84.6	78.46
CDY60836	Canola	cytosol	66.01	71.05
CDY03028	Canola	cytosol	77.26	70.38
CDY45190	Canola	nucleus	77.75	70.2
CDY17425	Canola	cytosol	68.7	70.07
CDY09349	Canola	nucleus	74.82	68.92
CDY62176	Canola	nucleus	75.06	68.68
Solyc04g005870.1.1	Tomato	cytosol	8.56	66.04
TraesCS4D01G286700.1	Wheat	cytosol	50.86	63.03
Solyc04g005670.1.1	Tomato	cytosol	60.39	61.14
TraesCS4A01G493800.1	Wheat	cytosol	36.92	60.16
PGSC0003DMT400007346	Potato	nucleus	62.84	59.35
CDY52764	Canola	cytosol	59.17	56.94
CDY46430	Canola	cytosol	59.17	56.81
GSMUA_Achr4P09990_001	Banana	cytosol	59.17	56.41
CDY16205	Canola	nucleus	58.19	56.26
GSMUA_Achr7P20970_001	Banana	cytosol	53.06	54.94
Os02t0748300-01	Rice	cytosol	56.97	54.69
Zm00001d052253_P001	Maize	cytosol	56.48	54.61
TraesCS6B01G334300.1	Wheat	cytosol, nucleus, plastid	56.72	54.59
TraesCS6D01G285100.1	Wheat	cytosol, nucleus, plastid	56.72	54.59
KXG30756	Sorghum	cytosol	56.48	54.35
TraesCS6A01G306000.1	Wheat	cytosol	56.48	54.35
HORVU6Hr1G075590.1	Barley	cytosol, nucleus, plastid	56.23	54.12
GSMUA_Achr4P00520_001	Banana	cytosol	51.34	53.98
GSMUA_Achr8P01380_001	Banana	cytosol	49.88	53.68
GSMUA_Achr1P21630_001	Banana	cytosol	49.39	53.58
TraesCS7A01G004600.1	Wheat	cytosol	47.43	53.3
Os03t0171600-01	Rice	cytosol	55.99	53.13
KXG40080	Sorghum	cytosol	55.5	53.04
PGSC0003DMT400059324	Potato	cytosol	62.1	52.92
TraesCS4A01G016200.1	Wheat	cytosol	55.5	52.67
Zm00001d027856_P001	Maize	cytosol	54.77	52.21
Zm00001d048310_P001	Maize	cytosol	54.52	52.1
Zm00001d014203_P001	Maize	cytosol, nucleus, plastid	56.23	51.92
HORVU4Hr1G075310.1	Barley	cytosol	55.5	51.71
TraesCS7D01G007100.1	Wheat	cytosol	46.7	51.34
TraesCS7D01G005100.1	Wheat	cytosol	26.89	51.16
OQU91835	Sorghum	cytosol, nucleus, plastid	55.26	50.9
Zm00001d033012_P001	Maize	cytosol	55.26	50.67
CDY70379	Canola	cytosol	19.56	50.63
CDX73096	Canola	cytosol	49.39	50.37
CDX68177	Canola	cytosol	51.1	50.12
GSMUA_Achr8P17960_001	Banana	nucleus	50.86	50.0
CDX96551	Canola	cytosol	49.39	49.75
CDX85842	Canola	cytosol	51.59	49.41
VIT_01s0026g02080.t01	Wine grape	nucleus	64.55	48.8
KRH45883	Soybean	cytosol	63.57	48.24
GSMUA_Achr10P...	Banana	nucleus	51.1	48.05
KRH74828	Soybean	cytosol	62.84	47.86
KRG99114	Soybean	cytosol	62.84	47.68
KRH70694	Soybean	cytosol	62.59	47.5
TraesCS4A01G487800.1	Wheat	cytosol	29.83	47.29
Os11t0602800-01	Rice	nucleus	49.39	46.76
HORVU2Hr1G057140.1	Barley	cytosol	20.78	45.7
HORVU2Hr1G057150.1	Barley	cytosol	20.78	45.7
PGSC0003DMT400091785	Potato	cytosol, mitochondrion, plastid	17.6	45.57
TraesCS4A01G492300.1	Wheat	cytosol, golgi, plastid	42.3	44.94
Zm00001d048898_P001	Maize	cytosol	47.68	44.83
GSMUA_Achr2P14920_001	Banana	mitochondrion	52.08	44.56
TraesCS4A01G489600.1	Wheat	cytosol	41.08	44.44
TraesCS4A01G489300.1	Wheat	cytosol	41.32	44.36
Zm00001d007596_P001	Maize	nucleus, plastid	47.68	44.22
OQU83795	Sorghum	cytosol	47.43	43.5
PGSC0003DMT400007391	Potato	cytosol	13.94	42.54
GSMUA_Achr4P24130_001	Banana	nucleus	52.81	41.78
GSMUA_Achr3P01570_001	Banana	golgi	49.88	41.72
CDY31534	Canola	cytosol	36.19	39.47
CDX80156	Canola	cytosol	36.43	39.31
HORVU7Hr1G000010.5	Barley	cytosol	42.05	39.27
Solyc05g007220.2.1	Tomato	nucleus	61.12	38.82
CDY66938	Canola	cytosol, mitochondrion	15.16	35.23
HORVU7Hr1G000070.1	Barley	cytosol	44.25	34.48
CDX82682	Canola	cytosol	25.67	33.55
TraesCS4A01G491100.1	Wheat	cytosol	42.05	32.7
CDY53460	Canola	cytosol	13.94	32.39
CDY34175	Canola	cytosol	30.81	30.66
CDY28493	Canola	cytosol	30.56	30.41
CDY13683	Canola	cytosol	31.54	29.79
CDY65956	Canola	cytosol	13.69	29.79
CDY52395	Canola	cytosol	31.05	29.33
TraesCS4A01G493200.1	Wheat	cytosol, plasma membrane	33.74	29.11
CDY36146	Canola	cytosol	28.61	28.06
CDY63005	Canola	cytosol	28.36	27.82
CDY69929	Canola	cytosol	28.36	27.82
CDY64780	Canola	cytosol	29.1	27.42
CDX90239	Canola	cytosol	26.41	27.2
CDY49979	Canola	cytosol	26.89	26.96
CDY12345	Canola	cytosol	28.61	25.71
CDY01301	Canola	cytosol	8.31	21.66
CDY04697	Canola	cytosol	11.25	20.63
CDY30645	Canola	nucleus	11.25	20.63
CDY49977	Canola	cytosol	23.47	20.43
CDY51562	Canola	cytosol	17.36	19.78
CDX81755	Canola	cytosol	18.58	19.49
CDY22982	Canola	cytosol	16.38	19.36
CDY12647	Canola	cytosol	17.11	19.34
CDX96091	Canola	cytosol	17.6	19.3
CDX99248	Canola	cytosol	16.38	19.25
CDY58793	Canola	cytosol	16.87	19.22
CDX82306	Canola	cytosol	16.14	19.08
CDY18573	Canola	cytosol	16.14	18.97
CDY33348	Canola	cytosol	8.31	18.89
CDY01812	Canola	cytosol	17.11	18.77
CDY58259	Canola	cytosol	15.89	18.73
CDX76807	Canola	cytosol	16.38	18.16
CDY34765	Canola	cytosol	16.38	18.01
CDY02451	Canola	cytosol	19.07	17.93
CDY33062	Canola	mitochondrion, plastid	19.07	17.93
CDY64382	Canola	plastid	14.91	17.84
CDX96822	Canola	extracellular, vacuole	18.83	17.82
CDY36145	Canola	cytosol	15.16	17.71
CDY35074	Canola	cytosol	9.05	17.7
CDY08233	Canola	mitochondrion	18.83	17.7
CDY10574	Canola	cytosol	18.83	17.7
CDY24045	Canola	mitochondrion	18.83	17.7
CDY66857	Canola	cytosol	15.4	17.7
CDY70128	Canola	cytosol	14.43	17.51
CDY26117	Canola	cytosol	18.58	17.47
CDY35075	Canola	cytosol	7.82	17.39
CDX99882	Canola	mitochondrion, plastid	16.87	17.34
CDY15708	Canola	cytosol	14.43	17.2
CDY03923	Canola	cytosol	14.18	17.16
CDY26295	Canola	mitochondrion, plastid	16.63	17.09
CDY52247	Canola	cytosol	13.2	16.88
CDX90085	Canola	plastid	14.18	16.81
CDY11811	Canola	plastid	14.18	16.81
CDY54825	Canola	cytosol	7.82	16.58
CDY64883	Canola	golgi, plastid	16.63	16.55
CDY00415	Canola	mitochondrion	8.31	15.89
CDY01300	Canola	cytosol	8.56	15.62
CDY17172	Canola	cytosol	5.38	15.28
CDY15707	Canola	cytosol, plastid	11.25	13.03
CDY03921	Canola	cytosol, extracellular, plasma membrane	10.02	11.61

Protein Annotations

EnsemblPlants:CDX81631	EnsemblPlantsGene:GSBRNA2T00136544001	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413	PANTHER:PTHR24413:SF138	PFAM:PF01344
ProteinID:CDX81631	ProteinID:CDX81631.1	SEG:seg	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI0004EE0390
MapMan:35.1	:	:	:	:	:

Description

BnaC08g39700D

Coordinates

chrLK031826:-:83177..84648

Molecular Weight (calculated)

45435.2 Da

IEP (calculated)

8.240

GRAVY (calculated)

-0.354

Length

409 amino acids

Sequence
(BLAST)

001: MVEDHTYLLS RVFSSSRPSE SNWDRMYPPQ EEDSSASNLK TGKRALDGDE LKDDLRQTKT RKLTDDDSLI NDIIGRDISI SCLIRCSRSD YASIASLNRS
101: FRSLVKSGAI YKLRRQNRII EHWVYFSCQL LEWVAFDPVE RRWMNLPTMR SGDTFMCTDK ESLAVGTDLL VLGKDDGSSH VVYRYSLLTN SWSPGKKMNS
201: PRCLFGSASL GEIAIFAGGC DSLGKISDVA EMYNSELQTW TTLPKMNKPR KMCSGVFMDG KFYVIGGVGG GEEYDLAAKK WTEIPEMSPP RSREMPASAE
301: APPLVAVVNN ELYAADHAGM VVRKYDKGSK KWFTLGRLPE RAGSVNGWGL AFRACGERLI VIGGPKSSGG GFIELNSWIP TSGGSPPVWT LLDRKHSSNF
401: VYNCAVMGC

Best Arabidopsis Sequence Match ( AT1G14330.1 )
(BLAST)

001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C

Arabidopsis Description

At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.