Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G286700.1 | Wheat | cytosol | 69.84 | 91.21 |
| KXG40080 | Sorghum | cytosol | 88.4 | 89.02 |
| Zm00001d048310_P001 | Maize | cytosol | 86.77 | 87.38 |
| TraesCS4A01G016200.1 | Wheat | cytosol | 86.54 | 86.54 |
| HORVU4Hr1G075310.1 | Barley | cytosol | 87.01 | 85.42 |
| Zm00001d027856_P001 | Maize | cytosol | 84.69 | 85.08 |
| TraesCS4A01G493800.1 | Wheat | cytosol | 47.1 | 80.88 |
| TraesCS7A01G004600.1 | Wheat | cytosol | 63.81 | 75.55 |
| TraesCS7D01G007100.1 | Wheat | cytosol | 60.79 | 70.43 |
| TraesCS7D01G005100.1 | Wheat | cytosol | 34.11 | 68.37 |
| GSMUA_Achr8P01380_001 | Banana | cytosol | 56.38 | 63.95 |
| CDY33755 | Canola | cytosol | 18.1 | 63.41 |
| TraesCS4A01G487800.1 | Wheat | cytosol | 37.82 | 63.18 |
| HORVU2Hr1G057150.1 | Barley | cytosol | 27.15 | 62.9 |
| HORVU2Hr1G057140.1 | Barley | cytosol | 27.15 | 62.9 |
| GSMUA_Achr1P21630_001 | Banana | cytosol | 54.76 | 62.6 |
| Os02t0748300-01 | Rice | cytosol | 61.25 | 61.97 |
| TraesCS4A01G489300.1 | Wheat | cytosol | 51.97 | 58.79 |
| TraesCS4A01G489600.1 | Wheat | cytosol | 51.51 | 58.73 |
| TraesCS4A01G492300.1 | Wheat | cytosol, golgi, plastid | 52.44 | 58.7 |
| VIT_17s0000g05920.t01 | Wine grape | cytosol | 59.4 | 57.79 |
| GSMUA_Achr8P17960_001 | Banana | nucleus | 55.45 | 57.45 |
| Bra026838.1-P | Field mustard | nucleus | 53.13 | 56.27 |
| CDY62015 | Canola | nucleus | 54.06 | 56.14 |
| CDX81631 | Canola | nucleus | 53.13 | 55.99 |
| GSMUA_Achr10P... | Banana | nucleus | 56.38 | 55.86 |
| KRH54527 | Soybean | cytosol | 57.08 | 55.78 |
| Solyc03g113010.1.1 | Tomato | cytosol | 56.84 | 55.56 |
| KRH63378 | Soybean | cytosol | 56.61 | 55.33 |
| CDY49094 | Canola | nucleus | 54.29 | 55.19 |
| Solyc04g005670.1.1 | Tomato | cytosol | 51.28 | 54.7 |
| PGSC0003DMT400007346 | Potato | nucleus | 54.76 | 54.5 |
| AT1G14330.1 | Thale cress | nucleus | 54.99 | 53.74 |
| GSMUA_Achr2P14920_001 | Banana | mitochondrion | 59.16 | 53.35 |
| PGSC0003DMT400046591 | Potato | extracellular | 56.38 | 53.29 |
| CDY60836 | Canola | cytosol | 46.87 | 53.16 |
| Os11t0602800-01 | Rice | nucleus | 53.13 | 53.01 |
| CDY09349 | Canola | nucleus | 54.52 | 52.93 |
| Solyc04g005870.1.1 | Tomato | cytosol | 6.5 | 52.83 |
| Bra026575.1-P | Field mustard | nucleus | 54.29 | 52.7 |
| Bra017407.1-P | Field mustard | nucleus, plastid | 53.6 | 52.62 |
| CDY62176 | Canola | nucleus | 54.52 | 52.57 |
| HORVU7Hr1G000010.5 | Barley | cytosol | 53.36 | 52.51 |
| CDY17425 | Canola | cytosol | 48.49 | 52.12 |
| KRH03453 | Soybean | cytosol | 49.19 | 51.96 |
| CDY45190 | Canola | nucleus | 54.29 | 51.66 |
| Bra024801.1-P | Field mustard | nucleus | 54.29 | 51.66 |
| CDY03028 | Canola | cytosol | 53.6 | 51.45 |
| AT1G26930.1 | Thale cress | cytosol | 50.12 | 51.31 |
| AT2G02870.1 | Thale cress | nucleus | 55.45 | 51.18 |
| CDY16205 | Canola | nucleus | 49.19 | 50.12 |
| CDY46430 | Canola | cytosol | 49.42 | 50.0 |
| CDY52764 | Canola | cytosol | 49.19 | 49.88 |
| KRH56929 | Soybean | cytosol | 47.1 | 49.88 |
| Bra016297.1-P | Field mustard | cytosol | 49.19 | 49.77 |
| PGSC0003DMT400059324 | Potato | cytosol | 54.76 | 49.17 |
| GSMUA_Achr4P24130_001 | Banana | nucleus | 57.77 | 48.16 |
| CDY33754 | Canola | nucleus | 27.84 | 48.0 |
| GSMUA_Achr3P01570_001 | Banana | golgi | 54.06 | 47.65 |
| VIT_01s0026g02080.t01 | Wine grape | nucleus | 58.47 | 46.58 |
| KRH45883 | Soybean | cytosol | 56.38 | 45.08 |
| KRG99114 | Soybean | cytosol | 55.92 | 44.71 |
| KRH70694 | Soybean | cytosol | 55.68 | 44.53 |
| KRH74828 | Soybean | cytosol | 55.45 | 44.51 |
| HORVU7Hr1G000070.1 | Barley | cytosol | 54.06 | 44.38 |
| TraesCS4A01G491100.1 | Wheat | cytosol | 53.83 | 44.11 |
| Os04t0619300-01 | Rice | cytosol, extracellular | 44.08 | 39.92 |
| PGSC0003DMT400091785 | Potato | cytosol, mitochondrion, plastid | 14.62 | 39.87 |
| TraesCS4A01G493200.1 | Wheat | cytosol, plasma membrane | 42.92 | 39.03 |
| PGSC0003DMT400007391 | Potato | cytosol | 12.06 | 38.81 |
| Solyc05g007220.2.1 | Tomato | nucleus | 54.06 | 36.18 |
| Os10t0409900-01 | Rice | plastid | 22.51 | 21.95 |
| Os10t0388200-01 | Rice | cytosol | 17.63 | 21.9 |
| Os02t0504900-01 | Rice | cytosol | 18.56 | 20.78 |
| Os03t0167800-02 | Rice | cytosol | 20.65 | 20.32 |
| Os02t0202900-00 | Rice | cytosol | 19.95 | 19.72 |
| Os04t0380300-01 | Rice | plastid | 16.94 | 19.47 |
| Os02t0114600-02 | Rice | cytosol | 16.01 | 19.17 |
| Os02t0574900-01 | Rice | cytosol | 20.42 | 19.13 |
| Os07t0153400-01 | Rice | mitochondrion | 17.87 | 18.97 |
| Os10t0363600-01 | Rice | cytosol, plastid | 19.26 | 17.47 |
| Os06t0655500-01 | Rice | cytosol | 15.08 | 16.93 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:4331777 | ProteinID:ABF94218.1 | ProteinID:ABF94219.1 | ProteinID:ABF94220.1 |
| EMBL:AK061344 | EMBL:AK072716 | ProteinID:BAF11027.1 | ProteinID:BAS82536.1 | ProteinID:EAZ25750.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019005 | GO:GO:0019538 |
| GO:GO:0030162 | GO:GO:0031625 | GO:GO:0043161 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 |
| EnsemblPlantsGene:Os03g0171600 | EnsemblPlants:Os03t0171600-01 | PFAM:PF01344 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF133 | UniProt:Q10R48 |
| SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI0000DB4882 | RefSeq:XP_015631568.1 | RefSeq:XP_015631569.1 | SEG:seg |
Description
F-Box Protein 12, F-box protein 130, F-box protein containing kelch motif 12F-box protein containing a Kelch repeat motif, Reguration of leaf senescence, seed size and grain number (Os03t0171600-01);Kelch-type beta propeller domain containing protein. (Os03t0171600-02);Similar to kelch motif family protein. (Os03t0171600-03)
Coordinates
chr3:+:3834150..3836591
Molecular Weight (calculated)
47524.2 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.386
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLEGNSCLI SRSLPSSCEP ESQWAYLSHE VLNGKRPAPE DAEAEDMDEV DFGGGKRSKP PSPQPHTPDI SEGHGSSRHV AASGGGEEHG NGSSLIGAIG
101: RDLTINCLLR LSRSDYGSVA SLNKDFRSLV RNGEIYRLRR QSGVAEHWVY FSCNVLEWDA YDPYRERWIQ VPKMPPDECF MCSDKESLAV GTELLVFAMA
201: HIVFRYSILT NSWTRADPMI SPRCLFGSTS VGAKAYVAGG TDSSGRILSS AEMYDSETHS WTPLPSMNRA RKMCSGVFMD GKFYVVGGVA SNNKVLTCGE
301: EYDLKRRSWR VIENMSEGLN GVTGAPPLIA VVNNELYAAD YSEKDVKKYD KQNNKWITLG KLPERSVSMN GWGLAFRACG DRLIVIGGPR TSIGGTIELN
401: SWTPDERPPV WNLIARRPSG NFVYNCAVMG C
101: RDLTINCLLR LSRSDYGSVA SLNKDFRSLV RNGEIYRLRR QSGVAEHWVY FSCNVLEWDA YDPYRERWIQ VPKMPPDECF MCSDKESLAV GTELLVFAMA
201: HIVFRYSILT NSWTRADPMI SPRCLFGSTS VGAKAYVAGG TDSSGRILSS AEMYDSETHS WTPLPSMNRA RKMCSGVFMD GKFYVVGGVA SNNKVLTCGE
301: EYDLKRRSWR VIENMSEGLN GVTGAPPLIA VVNNELYAAD YSEKDVKKYD KQNNKWITLG KLPERSVSMN GWGLAFRACG DRLIVIGGPR TSIGGTIELN
401: SWTPDERPPV WNLIARRPSG NFVYNCAVMG C
001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C
Arabidopsis Description
At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.