Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G057140.1 | Barley | cytosol | 24.89 | 63.44 |
| HORVU2Hr1G057150.1 | Barley | cytosol | 24.89 | 63.44 |
| HORVU7Hr1G000010.5 | Barley | cytosol | 55.49 | 60.05 |
| TraesCS4A01G492300.1 | Wheat | cytosol, golgi, plastid | 46.62 | 57.4 |
| TraesCS4A01G489300.1 | Wheat | cytosol | 45.57 | 56.69 |
| TraesCS4A01G489600.1 | Wheat | cytosol | 44.94 | 56.35 |
| TraesCS4A01G487800.1 | Wheat | cytosol | 28.06 | 51.55 |
| TraesCS7D01G005100.1 | Wheat | cytosol | 23.0 | 50.7 |
| TraesCS7A01G004600.1 | Wheat | cytosol | 36.08 | 46.98 |
| TraesCS4A01G491100.1 | Wheat | cytosol | 49.16 | 44.3 |
| TraesCS4A01G493800.1 | Wheat | cytosol | 23.42 | 44.22 |
| HORVU7Hr1G000070.1 | Barley | cytosol | 48.73 | 44.0 |
| TraesCS4A01G016200.1 | Wheat | cytosol | 39.03 | 42.92 |
| Os03t0171600-01 | Rice | cytosol | 39.03 | 42.92 |
| Zm00001d048310_P001 | Maize | cytosol | 38.19 | 42.29 |
| KXG40080 | Sorghum | cytosol | 37.97 | 42.06 |
| Zm00001d027856_P001 | Maize | cytosol | 36.71 | 40.56 |
| TraesCS6A01G306000.1 | Wheat | cytosol | 34.18 | 38.12 |
| PGSC0003DMT400091785 | Potato | cytosol, mitochondrion, plastid | 12.66 | 37.97 |
| CDY33754 | Canola | nucleus | 19.62 | 37.2 |
| CDY60836 | Canola | cytosol | 29.54 | 36.84 |
| Solyc04g005670.1.1 | Tomato | cytosol | 31.01 | 36.39 |
| GSMUA_Achr1P21630_001 | Banana | cytosol | 28.69 | 36.07 |
| VIT_17s0000g05920.t01 | Wine grape | cytosol | 33.33 | 35.67 |
| GSMUA_Achr8P01380_001 | Banana | cytosol | 28.27 | 35.26 |
| CDY17425 | Canola | cytosol | 29.75 | 35.16 |
| PGSC0003DMT400007346 | Potato | nucleus | 31.86 | 34.87 |
| KRH54527 | Soybean | cytosol | 31.65 | 34.01 |
| Bra026838.1-P | Field mustard | nucleus | 29.11 | 33.91 |
| Bra026575.1-P | Field mustard | nucleus | 31.65 | 33.78 |
| CDX81631 | Canola | nucleus | 29.11 | 33.74 |
| CDY09349 | Canola | nucleus | 31.43 | 33.56 |
| CDY62176 | Canola | nucleus | 31.65 | 33.56 |
| CDY62015 | Canola | nucleus | 29.32 | 33.49 |
| Solyc03g113010.1.1 | Tomato | cytosol | 31.01 | 33.33 |
| KRH63378 | Soybean | cytosol | 31.01 | 33.33 |
| AT1G14330.1 | Thale cress | nucleus | 30.8 | 33.11 |
| GSMUA_Achr10P... | Banana | nucleus | 30.38 | 33.1 |
| GSMUA_Achr2P14920_001 | Banana | mitochondrion | 33.33 | 33.05 |
| CDY49094 | Canola | nucleus | 29.54 | 33.02 |
| GSMUA_Achr8P17960_001 | Banana | nucleus | 28.9 | 32.93 |
| KRH03453 | Soybean | cytosol | 28.27 | 32.84 |
| Bra017407.1-P | Field mustard | nucleus, plastid | 30.38 | 32.8 |
| AT1G26930.1 | Thale cress | cytosol | 28.9 | 32.54 |
| PGSC0003DMT400046591 | Potato | extracellular | 31.22 | 32.46 |
| CDY52764 | Canola | cytosol | 28.9 | 32.24 |
| KRH56929 | Soybean | cytosol | 27.64 | 32.19 |
| CDY46430 | Canola | cytosol | 28.9 | 32.16 |
| Bra016297.1-P | Field mustard | cytosol | 28.69 | 31.92 |
| Bra024801.1-P | Field mustard | nucleus | 30.38 | 31.79 |
| CDY45190 | Canola | nucleus | 30.38 | 31.79 |
| AT2G02870.1 | Thale cress | nucleus | 31.22 | 31.69 |
| CDY16205 | Canola | nucleus | 28.27 | 31.68 |
| CDY03028 | Canola | cytosol | 29.96 | 31.63 |
| GSMUA_Achr4P24130_001 | Banana | nucleus | 33.76 | 30.95 |
| GSMUA_Achr3P01570_001 | Banana | golgi | 31.65 | 30.67 |
| PGSC0003DMT400059324 | Potato | cytosol | 30.8 | 30.42 |
| TraesCS2A01G462600.1 | Wheat | cytosol | 28.27 | 29.84 |
| VIT_01s0026g02080.t01 | Wine grape | nucleus | 32.49 | 28.47 |
| Solyc04g005870.1.1 | Tomato | cytosol | 3.16 | 28.3 |
| KRH74828 | Soybean | cytosol | 31.65 | 27.93 |
| KRH70694 | Soybean | cytosol | 31.22 | 27.46 |
| KRH45883 | Soybean | cytosol | 31.22 | 27.46 |
| KRG99114 | Soybean | cytosol | 31.01 | 27.27 |
| Solyc05g007220.2.1 | Tomato | nucleus | 30.38 | 22.36 |
| TraesCS3A01G534600.1 | Wheat | cytosol | 16.03 | 17.63 |
| TraesCS2A01G280900.1 | Wheat | mitochondrion | 13.92 | 17.23 |
| PGSC0003DMT400007391 | Potato | cytosol | 4.85 | 17.16 |
| TraesCS4A01G020200.1 | Wheat | cytosol | 15.4 | 16.98 |
| TraesCS3A01G446400.1 | Wheat | cytosol, plastid | 13.71 | 16.88 |
| TraesCS2A01G499700.1 | Wheat | cytosol, mitochondrion | 13.5 | 16.08 |
| TraesCS6A01G175700.1 | Wheat | plastid | 14.13 | 15.84 |
| CDY33755 | Canola | cytosol | 4.01 | 15.45 |
| TraesCS6A01G037900.1 | Wheat | cytosol | 11.18 | 14.6 |
| TraesCS4A01G472100.1 | Wheat | cytosol | 13.92 | 14.41 |
| TraesCS5A01G544300.1 | Wheat | extracellular, plasma membrane | 8.65 | 14.34 |
| TraesCS6A01G211500.1 | Wheat | extracellular, golgi | 9.07 | 13.96 |
| TraesCS7A01G020100.1 | Wheat | cytosol, plastid | 13.29 | 13.82 |
| TraesCS7A01G496600.1 | Wheat | cytosol | 11.18 | 13.77 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G493200.1 | EnsemblPlantsGene:TraesCS4A01G493200 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF133 | PFAM:PF01344 |
| SMART:SM00612 | SUPFAM:SSF117281 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4A:-:741812508..741814130
Molecular Weight (calculated)
52787.1 Da
IEP (calculated)
7.293
GRAVY (calculated)
-0.139
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MHLWNIELGN LCILKIAVDG LSVNDVDILR GLPALTALSL YVKKSPGIKI IFGMAAGFTA LKYLKLRFMS GMAWLKFEAD AMPNLWKLRL VFDAIPRMDQ
101: RLDLYLDREQ WKQYQHGTAL ISMEHMAGLG EVSAKFGGAP ADLDYVSRIG VVSNHPSDPI IDVQLVDSGT HGDKRISARS PESTSCSLHV PGAGAGGEVS
201: WSNIIGVIGR DLFISCLHRL SRSEYGAIAS LNRDFNSVVR NGDIYRLRRK NGVAEHWLYL YFGSPLQWEA YDPSTGRWIQ VPNMPPAEST IWEALAVGTK
301: LLVFANRRVA LRYSILTNSW TWLGHADAMN TPRSCFGSAS VGEKAYVAGG TDSSYRELSS AEMYESETHT WAPLPSMNRS RYKCSGAFMD GKFYVIGGLT
401: RSRELLTCCE EYDLNRRSWR VIDNMSQGLN ETKLVAPPLI AVVNNELYAA DYSENNELTA GQQVDHSWKI ACTF
101: RLDLYLDREQ WKQYQHGTAL ISMEHMAGLG EVSAKFGGAP ADLDYVSRIG VVSNHPSDPI IDVQLVDSGT HGDKRISARS PESTSCSLHV PGAGAGGEVS
201: WSNIIGVIGR DLFISCLHRL SRSEYGAIAS LNRDFNSVVR NGDIYRLRRK NGVAEHWLYL YFGSPLQWEA YDPSTGRWIQ VPNMPPAEST IWEALAVGTK
301: LLVFANRRVA LRYSILTNSW TWLGHADAMN TPRSCFGSAS VGEKAYVAGG TDSSYRELSS AEMYESETHT WAPLPSMNRS RYKCSGAFMD GKFYVIGGLT
401: RSRELLTCCE EYDLNRRSWR VIDNMSQGLN ETKLVAPPLI AVVNNELYAA DYSENNELTA GQQVDHSWKI ACTF
001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C
Arabidopsis Description
At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.