Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03028 | Canola | cytosol | 87.37 | 90.87 |
| CDY17425 | Canola | cytosol | 77.73 | 90.52 |
| Bra017407.1-P | Field mustard | nucleus, plastid | 85.01 | 90.43 |
| CDY45190 | Canola | nucleus | 87.37 | 90.07 |
| Bra024801.1-P | Field mustard | nucleus | 87.37 | 90.07 |
| CDY09349 | Canola | nucleus | 84.58 | 88.96 |
| Bra026575.1-P | Field mustard | nucleus | 84.58 | 88.96 |
| CDY62176 | Canola | nucleus | 84.37 | 88.14 |
| CDY60836 | Canola | cytosol | 71.09 | 87.37 |
| AT1G14330.1 | Thale cress | nucleus | 76.23 | 80.73 |
| Solyc04g005670.1.1 | Tomato | cytosol | 56.96 | 65.84 |
| PGSC0003DMT400007346 | Potato | nucleus | 60.39 | 65.13 |
| TraesCS4D01G286700.1 | Wheat | cytosol | 45.4 | 64.24 |
| Solyc04g005870.1.1 | Tomato | cytosol | 7.28 | 64.15 |
| AT1G26930.1 | Thale cress | cytosol | 57.39 | 63.66 |
| TraesCS4A01G493800.1 | Wheat | cytosol | 32.98 | 61.35 |
| PGSC0003DMT400059324 | Potato | cytosol | 61.24 | 59.58 |
| GSMUA_Achr4P09990_001 | Banana | cytosol | 53.96 | 58.74 |
| TraesCS6B01G334300.1 | Wheat | cytosol, nucleus, plastid | 52.68 | 57.88 |
| TraesCS6A01G306000.1 | Wheat | cytosol | 52.68 | 57.88 |
| TraesCS6D01G285100.1 | Wheat | cytosol, nucleus, plastid | 52.68 | 57.88 |
| GSMUA_Achr7P20970_001 | Banana | cytosol | 48.61 | 57.47 |
| Zm00001d052253_P001 | Maize | cytosol | 52.03 | 57.45 |
| HORVU6Hr1G075590.1 | Barley | cytosol, nucleus, plastid | 52.25 | 57.41 |
| KXG30756 | Sorghum | cytosol | 52.03 | 57.18 |
| Os02t0748300-01 | Rice | cytosol | 52.03 | 57.04 |
| GSMUA_Achr8P01380_001 | Banana | cytosol | 46.25 | 56.84 |
| GSMUA_Achr1P21630_001 | Banana | cytosol | 45.61 | 56.5 |
| GSMUA_Achr4P00520_001 | Banana | cytosol | 46.68 | 56.04 |
| TraesCS7A01G004600.1 | Wheat | cytosol | 43.47 | 55.77 |
| TraesCS4A01G016200.1 | Wheat | cytosol | 51.18 | 55.45 |
| Os03t0171600-01 | Rice | cytosol | 51.18 | 55.45 |
| KXG40080 | Sorghum | cytosol | 50.32 | 54.91 |
| Zm00001d048310_P001 | Maize | cytosol | 50.11 | 54.67 |
| HORVU4Hr1G075310.1 | Barley | cytosol | 50.96 | 54.21 |
| VIT_01s0026g02080.t01 | Wine grape | nucleus | 62.74 | 54.16 |
| Zm00001d027856_P001 | Maize | cytosol | 49.46 | 53.85 |
| AT1G74510.2 | Thale cress | cytosol | 51.82 | 53.66 |
| KRH45883 | Soybean | cytosol | 61.88 | 53.62 |
| KRH74828 | Soybean | cytosol | 61.24 | 53.26 |
| TraesCS7D01G007100.1 | Wheat | cytosol | 42.4 | 53.23 |
| KRG99114 | Soybean | cytosol | 61.24 | 53.06 |
| Zm00001d014203_P001 | Maize | cytosol, nucleus, plastid | 50.32 | 53.05 |
| OQU91835 | Sorghum | cytosol, nucleus, plastid | 50.32 | 52.93 |
| KRH70694 | Soybean | cytosol | 60.6 | 52.5 |
| GSMUA_Achr8P17960_001 | Banana | nucleus | 46.25 | 51.92 |
| PGSC0003DMT400091785 | Potato | cytosol, mitochondrion, plastid | 17.56 | 51.9 |
| Zm00001d033012_P001 | Maize | cytosol | 49.46 | 51.79 |
| TraesCS7D01G005100.1 | Wheat | cytosol | 23.55 | 51.16 |
| GSMUA_Achr10P... | Banana | nucleus | 47.32 | 50.8 |
| Os11t0602800-01 | Rice | nucleus | 45.18 | 48.84 |
| Zm00001d048898_P001 | Maize | cytosol | 44.54 | 47.82 |
| TraesCS4A01G487800.1 | Wheat | cytosol | 26.12 | 47.29 |
| GSMUA_Achr2P14920_001 | Banana | mitochondrion | 48.18 | 47.07 |
| HORVU2Hr1G057150.1 | Barley | cytosol | 18.42 | 46.24 |
| HORVU2Hr1G057140.1 | Barley | cytosol | 18.42 | 46.24 |
| OQU83795 | Sorghum | cytosol | 44.11 | 46.19 |
| Zm00001d007596_P001 | Maize | nucleus, plastid | 43.47 | 46.03 |
| TraesCS4A01G492300.1 | Wheat | cytosol, golgi, plastid | 37.47 | 45.45 |
| TraesCS4A01G489600.1 | Wheat | cytosol | 36.62 | 45.24 |
| TraesCS4A01G489300.1 | Wheat | cytosol | 36.83 | 45.14 |
| GSMUA_Achr3P01570_001 | Banana | golgi | 45.82 | 43.76 |
| GSMUA_Achr4P24130_001 | Banana | nucleus | 47.97 | 43.33 |
| Solyc05g007220.2.1 | Tomato | nucleus | 59.1 | 42.86 |
| PGSC0003DMT400007391 | Potato | cytosol | 11.99 | 41.79 |
| AT5G60570.2 | Thale cress | cytosol | 34.9 | 41.48 |
| HORVU7Hr1G000010.5 | Barley | cytosol | 37.69 | 40.18 |
| HORVU7Hr1G000070.1 | Barley | cytosol | 39.61 | 35.24 |
| TraesCS4A01G491100.1 | Wheat | cytosol | 37.9 | 33.65 |
| AT3G27150.1 | Thale cress | cytosol | 28.91 | 31.99 |
| TraesCS4A01G493200.1 | Wheat | cytosol, plasma membrane | 31.69 | 31.22 |
| AT5G40680.1 | Thale cress | mitochondrion | 26.77 | 30.12 |
| AT1G67480.1 | Thale cress | cytosol, mitochondrion | 16.7 | 20.74 |
| AT1G16250.2 | Thale cress | cytosol | 16.06 | 19.58 |
| AT3G61350.2 | Thale cress | cytosol | 14.99 | 19.55 |
| AT1G22040.1 | Thale cress | plastid | 19.49 | 19.16 |
| AT1G27420.1 | Thale cress | cytosol, plastid | 13.92 | 18.79 |
| AT3G63220.2 | Thale cress | cytosol | 14.13 | 18.75 |
| AT1G55270.1 | Thale cress | mitochondrion | 17.13 | 18.43 |
| AT1G30090.1 | Thale cress | mitochondrion, plastid | 14.99 | 17.59 |
| AT2G24540.1 | Thale cress | cytosol | 12.63 | 15.86 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:814818 | UniProt:A0A178VU91 | ProteinID:AAC32908.1 | ProteinID:AEC05636.1 |
| ProteinID:AEC05637.1 | ProteinID:AEC05638.1 | EMBL:AK317194 | ArrayExpress:AT2G02870 | EnsemblPlantsGene:AT2G02870 | RefSeq:AT2G02870 |
| TAIR:AT2G02870 | RefSeq:AT2G02870-TAIR-G | EnsemblPlants:AT2G02870.1 | TAIR:AT2G02870.1 | EMBL:AY060567 | EMBL:AY139977 |
| EMBL:BT002216 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019005 | GO:GO:0019538 | GO:GO:0030162 |
| GO:GO:0031625 | GO:GO:0042787 | GO:GO:0043161 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 |
| RefSeq:NP_001030959.1 | RefSeq:NP_001030960.1 | RefSeq:NP_178390.1 | ProteinID:OAP09959.1 | PFAM:PF01344 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF138 | UniProt:Q8L736 | SMART:SM00612 |
| SUPFAM:SSF117281 | UniParc:UPI00000ABFA4 | SEG:seg | : | : | : |
Description
SKIP11F-box/kelch-repeat protein SKIP11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L736]
Coordinates
chr2:+:837811..840398
Molecular Weight (calculated)
51700.8 Da
IEP (calculated)
4.822
GRAVY (calculated)
-0.417
Length
467 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEDRSPDSC LSTRVFSSSR LSESNWSNSY MYPEDDDKLL GNGKRALEVV GEVRQTKSLK LMGFSIIYDS DSSDYSLSGG EEQADAAIGD GSSSRQEQEQ
101: QSDFNDNGGD SSDSHSLINE IGRDNSIDCL IRCSRSDYGS IASLNRNFRS LVKSGEIYRL RRQNGFVEHW VYFSCQLLEW VAFDPVERRW MQLPTMPSSV
201: TFMCADKESL AVGTDLLVLG KDDFSSHVIY RYSLLTNSWS SGMKMNSPRC LFGSASLGEI AIFAGGCDSQ GKILDFAEMY NSELQTWITL PRMNKPRKMC
301: SGVFMDGKFY VIGGIGGADS KGLTCGEEYD LETKKWTQIP DLSPPRSRAD QADMSPAAEA PPLVAVVNNQ LYAADHADME VRKYDKENKK WLTVGRLPER
401: AGSVNGWGLA FRACGERLIV IGGPKCSGGG FIELNSWIPS DGGPPQWTLL DRKHSPTFVY NCAVMGC
101: QSDFNDNGGD SSDSHSLINE IGRDNSIDCL IRCSRSDYGS IASLNRNFRS LVKSGEIYRL RRQNGFVEHW VYFSCQLLEW VAFDPVERRW MQLPTMPSSV
201: TFMCADKESL AVGTDLLVLG KDDFSSHVIY RYSLLTNSWS SGMKMNSPRC LFGSASLGEI AIFAGGCDSQ GKILDFAEMY NSELQTWITL PRMNKPRKMC
301: SGVFMDGKFY VIGGIGGADS KGLTCGEEYD LETKKWTQIP DLSPPRSRAD QADMSPAAEA PPLVAVVNNQ LYAADHADME VRKYDKENKK WLTVGRLPER
401: AGSVNGWGLA FRACGERLIV IGGPKCSGGG FIELNSWIPS DGGPPQWTLL DRKHSPTFVY NCAVMGC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.