Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68177 | Canola | cytosol | 82.71 | 89.45 |
| Bra003796.1-P | Field mustard | cytosol | 83.59 | 88.29 |
| Bra015905.1-P | Field mustard | cytosol | 80.27 | 87.86 |
| CDX85842 | Canola | cytosol | 83.15 | 87.82 |
| CDX96551 | Canola | cytosol | 78.49 | 87.19 |
| CDX73096 | Canola | cytosol | 76.72 | 86.28 |
| Bra008155.1-P | Field mustard | cytosol | 51.88 | 78.79 |
| CDY70379 | Canola | cytosol | 25.94 | 74.05 |
| AT1G26930.1 | Thale cress | cytosol | 51.88 | 55.58 |
| AT1G14330.1 | Thale cress | nucleus | 52.55 | 53.74 |
| AT2G02870.1 | Thale cress | nucleus | 53.66 | 51.82 |
| AT5G60570.2 | Thale cress | cytosol | 35.03 | 40.2 |
| AT3G27150.1 | Thale cress | cytosol | 27.72 | 29.62 |
| AT5G40680.1 | Thale cress | mitochondrion | 25.5 | 27.71 |
| AT3G63220.2 | Thale cress | cytosol | 17.96 | 23.01 |
| AT1G16250.2 | Thale cress | cytosol | 17.29 | 20.37 |
| AT1G67480.1 | Thale cress | cytosol, mitochondrion | 15.96 | 19.15 |
| AT1G27420.1 | Thale cress | cytosol, plastid | 13.75 | 17.92 |
| AT1G22040.1 | Thale cress | plastid | 18.85 | 17.89 |
| AT3G61350.2 | Thale cress | cytosol | 13.97 | 17.6 |
| AT1G55270.1 | Thale cress | mitochondrion | 15.3 | 15.9 |
| AT2G24540.1 | Thale cress | cytosol | 13.08 | 15.86 |
| AT1G30090.1 | Thale cress | mitochondrion, plastid | 13.97 | 15.83 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:843792 | UniProt:A0A178WJ20 | ProteinID:AAG52353.1 | ProteinID:AEE35601.1 |
| ProteinID:AEE35602.1 | EMBL:AK228375 | ProteinID:ANM59124.1 | ArrayExpress:AT1G74510 | EnsemblPlantsGene:AT1G74510 | RefSeq:AT1G74510 |
| TAIR:AT1G74510 | RefSeq:AT1G74510-TAIR-G | EnsemblPlants:AT1G74510.2 | TAIR:AT1G74510.2 | Unigene:At.22567 | EMBL:BT005714 |
| EMBL:BT006071 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019005 | GO:GO:0019538 |
| GO:GO:0030162 | GO:GO:0031625 | GO:GO:0042787 | GO:GO:0043161 | InterPro:IPR001810 | InterPro:IPR015915 |
| InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | RefSeq:NP_001321513.1 | RefSeq:NP_177591.1 | RefSeq:NP_849884.1 | ProteinID:OAP18256.1 |
| PFAM:PF00646 | PFAM:PF01344 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF133 | UniProt:Q9CA63 | SMART:SM00612 | SUPFAM:SSF117281 |
| SUPFAM:SSF81383 | UniParc:UPI000000C708 | SEG:seg | : | : | : |
Description
F-box/kelch-repeat protein At1g74510 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA63]
Coordinates
chr1:+:28005551..28007739
Molecular Weight (calculated)
49650.3 Da
IEP (calculated)
7.253
GRAVY (calculated)
-0.257
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEAPSYLVS RDLPSSCEEE SKWIYNAHCV LQLSLRKRLL DDTDVEGSSA KKMLRVDHGS RGESDKITDS LQLAKTYQSS NQSQQGGGGD QQSSPVTRLD
101: QNALLNCLAH CSLSDFGSIA STNRTFRSLI KDSELYRLRR AKGIVEHWIY FSCRLLEWEA YDPNGDRWLR VPKMTFNECF MCSDKESLAV GTELLVFGKE
201: IMSHVIYRYS ILTNTWTSGM QMNVPRCLFG SASLGEIAVI AGGCDPRGRI LSSAELYNSE TGEWTVIPSM NKARKMCSSV FMDGNFYCIG GIGEGNSKML
301: LCGEVYDLKK KTWTLIPNML PERSSGGGGD QAKEIAAATA ASEAPPLVAV VKDELYAANY AQQEVKKYDK RLNVWNKVGN LPERASSMNG WGMAFRACGD
401: QLVVVGGPRA IGGGFIEINA CVPSEGTQLH WRVLASKPSG NFVYNCAVMG C
101: QNALLNCLAH CSLSDFGSIA STNRTFRSLI KDSELYRLRR AKGIVEHWIY FSCRLLEWEA YDPNGDRWLR VPKMTFNECF MCSDKESLAV GTELLVFGKE
201: IMSHVIYRYS ILTNTWTSGM QMNVPRCLFG SASLGEIAVI AGGCDPRGRI LSSAELYNSE TGEWTVIPSM NKARKMCSSV FMDGNFYCIG GIGEGNSKML
301: LCGEVYDLKK KTWTLIPNML PERSSGGGGD QAKEIAAATA ASEAPPLVAV VKDELYAANY AQQEVKKYDK RLNVWNKVGN LPERASSMNG WGMAFRACGD
401: QLVVVGGPRA IGGGFIEINA CVPSEGTQLH WRVLASKPSG NFVYNCAVMG C
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.