Factsheet for Bra015905.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96551	Canola	cytosol	93.2	94.58
CDX73096	Canola	cytosol	89.08	91.52
Bra003796.1-P	Field mustard	cytosol	85.44	82.44
AT1G74510.2	Thale cress	cytosol	87.86	80.27
Bra008155.1-P	Field mustard	cytosol	57.52	79.8
Bra026838.1-P	Field mustard	nucleus	50.97	51.6
Bra016297.1-P	Field mustard	cytosol	52.91	51.17
Bra017407.1-P	Field mustard	nucleus, plastid	53.4	50.11
Bra026575.1-P	Field mustard	nucleus	52.91	49.1
Bra024801.1-P	Field mustard	nucleus	52.43	47.68
Bra002471.1-P	Field mustard	cytosol	37.14	40.8
Bra032052.1-P	Field mustard	cytosol	15.29	35.8
Bra032983.1-P	Field mustard	cytosol	29.61	29.68
Bra025251.1-P	Field mustard	cytosol	30.1	28.64
Bra034944.1-P	Field mustard	cytosol	27.91	28.12
Bra010784.1-P	Field mustard	cytosol	26.94	27.96
Bra001739.1-P	Field mustard	cytosol	18.2	21.68
Bra037535.1-P	Field mustard	cytosol	18.2	21.61
Bra033998.1-P	Field mustard	cytosol	17.23	19.61
Bra004227.1-P	Field mustard	cytosol	17.23	19.03
Bra003447.1-P	Field mustard	cytosol	16.5	18.94
Bra032358.1-P	Field mustard	mitochondrion, plastid	17.23	17.84
Bra012304.1-P	Field mustard	cytosol	20.15	17.77
Bra010942.1-P	Field mustard	plastid	14.81	17.68
Bra007843.1-P	Field mustard	cytosol	15.53	17.2
Bra026073.1-P	Field mustard	cytosol	8.25	16.43
Bra031360.1-P	Field mustard	plastid	9.71	16.39
Bra030872.1-P	Field mustard	cytosol	16.5	15.63
Bra037989.1-P	Field mustard	cytosol, plastid	16.5	15.63
Bra011908.1-P	Field mustard	mitochondrion	16.26	15.4
Bra005497.1-P	Field mustard	cytosol	5.34	15.28
Bra030046.1-P	Field mustard	cytosol, plastid	11.16	13.03
Bra030045.1-P	Field mustard	cytosol	14.32	12.53

Protein Annotations

EnsemblPlants:Bra015905.1	EnsemblPlants:Bra015905.1-P	EnsemblPlantsGene:Bra015905	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413
PANTHER:PTHR24413:SF133	PFAM:PF01344	SEG:seg	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383
UniParc:UPI0002541E81	UniProt:M4DHC8	MapMan:35.1	:	:	:

Description

AT1G74510 (E=3e-190) | kelch repeat-containing F-box family protein

Coordinates

chrA07:+:20286904..20288142

Molecular Weight (calculated)

45506.5 Da

IEP (calculated)

7.224

GRAVY (calculated)

-0.238

Length

412 amino acids

Sequence
(BLAST)

001: MLETPSYLVS RNLPSSCQEE SMLIYNAQHY MLQLYLKKRL LDNDGDQQSS PVTLLDQNAL LNCLAHCSLS DFKSIASTNR TFRSLIKDSE LYRLRRAKGI
101: VEHWIYFSCR LLEWEAYDPN GDRWLRVPKM TFNECFMCSD KESLAVGTEL LVFGKEITSH VIYKYSILTN TWTSGMQMNT PRCLFGSASL GEMAVIAGGC
201: DPSGRILSSA EVYNSETGEW TEIPSMNKAR KMCSSVFMDG NYYVIGGIGE GNSKMLMCGE VYDLKKRTWS LIPNMLPERS NGGGGGGGGQ GKETSSSSAM
301: AASAAPPLVA VVKDELYAAS YEQQEVKRYD KRCNVWNKVG NLPERASSMN GWGMAFRACG DQLVVVGGPR TLGGGFIEIN ACVPREGESL HWRVLASKPS
401: GSFVYNCAVM GC

Best Arabidopsis Sequence Match ( AT1G74510.3 )
(BLAST)

001: MLEAPSYLVS RDLPSSCEEE SKWIYNAHCV LQLSLRKRLL DDTDVEGSSA KKMLRVDHGS RGESDKITDS LQLAKTYQSS NQSQQGGGGD QQSSPVTRLD
101: QNALLNCLAH CSLSDFGSIA STNRTFRSLI KDSELYRLRR AKGIVEHWIY FSCRLLEWEA YDPNGDRWLR VPKMTFNECF MCSDKESLAV GTELLVFGKE
201: IMSHVIYRYS ILTNTWTSGM QMNVPRCLFG SASLGEIAVI AGGCDPRGRI LSSAELYNSE TGEWTVIPSM NKARKMCSSV FMDGNFYCIG GIGEGNSKML
301: LCGEVYDLKK KTWTLIPNML PERSSGGGGD QAKEIAAATA ASEAPPLVAV VKDELYAANY AQQEVKKYDK RLNVWNKVGN LPERASSMNG WGMAFRACGD
401: QLVVVGGPRA IGGGFIEINA CVPSEGTQLH WRVLASKPSG NFVYNCAVMG C

Arabidopsis Description

F-box/kelch-repeat protein At1g74510 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA63]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.