Factsheet for Bra004227.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96091	Canola	cytosol	99.2	99.2
Bra033998.1-P	Field mustard	cytosol	85.52	88.12
AT1G67480.1	Thale cress	cytosol, mitochondrion	86.86	86.17
VIT_01s0010g03320.t01	Wine grape	cytosol	65.15	63.12
KRG97442	Soybean	cytosol, nucleus, peroxisome	61.93	62.43
KRH31463	Soybean	cytosol	63.81	61.82
KRH42654	Soybean	cytosol	64.08	61.6
Zm00001d016553_P001	Maize	cytosol	53.62	54.95
Os02t0504900-01	Rice	cytosol	56.3	54.55
EES06854	Sorghum	cytosol	54.69	53.26
GSMUA_Achr8P28270_001	Banana	cytosol	54.16	52.6
GSMUA_Achr6P20750_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	54.69	52.31
Os04t0380300-01	Rice	plastid	52.55	52.27
GSMUA_Achr3P16120_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	52.81	51.57
HORVU3Hr1G096780.1	Barley	cytosol, plastid	53.08	51.43
TraesCS3D01G439000.1	Wheat	cytosol	52.55	51.04
TraesCS3A01G446400.1	Wheat	cytosol, plastid	52.01	50.39
TraesCS3B01G481500.1	Wheat	cytosol, plastid	51.74	50.26
TraesCS2D01G279700.1	Wheat	mitochondrion	51.47	50.13
TraesCS2A01G280900.1	Wheat	mitochondrion	50.67	49.35
TraesCS2B01G298300.1	Wheat	mitochondrion	50.4	49.09
HORVU2Hr1G068790.2	Barley	cytosol	50.13	48.7
OQU81371	Sorghum	mitochondrion	48.79	48.28
Bra010942.1-P	Field mustard	plastid	35.66	38.55
Bra030046.1-P	Field mustard	cytosol, plastid	29.49	31.16
Bra030045.1-P	Field mustard	cytosol	34.58	27.39
Bra026073.1-P	Field mustard	cytosol	12.87	23.19
Bra032358.1-P	Field mustard	mitochondrion, plastid	24.13	22.61
Bra001739.1-P	Field mustard	cytosol	20.91	22.54
Bra011908.1-P	Field mustard	mitochondrion	25.74	22.07
Bra037535.1-P	Field mustard	cytosol	20.38	21.9
Bra037989.1-P	Field mustard	cytosol, plastid	25.2	21.61
Bra030872.1-P	Field mustard	cytosol	25.2	21.61
Bra003447.1-P	Field mustard	cytosol	20.11	20.89
Bra005497.1-P	Field mustard	cytosol	8.04	20.83
Bra002471.1-P	Field mustard	cytosol	20.91	20.8
Bra031360.1-P	Field mustard	plastid	12.6	19.26
Bra012304.1-P	Field mustard	cytosol	23.59	18.84
Bra007843.1-P	Field mustard	cytosol	18.5	18.55
Bra008155.1-P	Field mustard	cytosol	14.48	18.18
Bra016297.1-P	Field mustard	cytosol	20.64	18.08
Bra026838.1-P	Field mustard	nucleus	19.3	17.69
Bra032983.1-P	Field mustard	cytosol	19.3	17.52
Bra015905.1-P	Field mustard	cytosol	19.03	17.23
Bra026575.1-P	Field mustard	nucleus	20.38	17.12
Bra003796.1-P	Field mustard	cytosol	19.57	17.1
Bra017407.1-P	Field mustard	nucleus, plastid	19.57	16.63
Bra024801.1-P	Field mustard	nucleus	19.57	16.11
Bra010784.1-P	Field mustard	cytosol	16.09	15.11
Bra025251.1-P	Field mustard	cytosol	17.16	14.78
Bra034944.1-P	Field mustard	cytosol	14.75	13.45
Bra032052.1-P	Field mustard	cytosol	6.17	13.07

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EnsemblPlantsGene:Bra004227	EnsemblPlants:Bra004227.1	EnsemblPlants:Bra004227.1-P	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	UniProt:M4CJ43	PFAM:PF00646	PFAM:PF01344	PANTHER:PTHR24412
PANTHER:PTHR24412:SF377	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI00025415F1	SEG:seg

Description

AT1G67480 (E=4e-183) | kelch repeat-containing F-box family protein

Coordinates

chrA07:+:17547056..17548775

Molecular Weight (calculated)

40886.3 Da

IEP (calculated)

8.098

GRAVY (calculated)

-0.070

Length

373 amino acids

Sequence
(BLAST)

001: MQAFVSGKKR VVVSNGMCFS KDNLDLGSEN YRDVPLIPGL SDDVAKMCLA LVPRASFPSM GRVCKKWRYV VKSKEFITVR RLAGMLEEWL YVLTTNAGGK
101: ESHWEVMDCQ GRKLSSLPPM PGPAKTGFKV VVVDGKLLVV AGCALINGSL VASSDVYQFD TCLNSWSRLE DLKEARYDFA CAEVNGLVYV VGGHAVDGES
201: LSSAEVYDPE TGIWTFIESL RRPRWGCFAS GFNGKLYVMG GRSNFTIGNS KLVDVYNPQC GSWCGNKNGL TMVTAHVEVG KKLFCIDWKN QRKMSVFNAE
301: DETWEVVALP LSGSSRAGFQ FGKLNGKLLL FSSQEEAGRS TLMYDPDAAP GKQWMTSEIK LSGPCVCSVT ITA

Best Arabidopsis Sequence Match ( AT1G67480.3 )
(BLAST)

001: MQAFALSGKK RIVNHGMCFS KGNLDLGSRL SENFMDDPLI PGLPDDVAKQ CLALVPRARF PSMGSVCKKW RFVVQSKEFI TVRRLAGMLE EWLYVLTMNA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA

Arabidopsis Description

F-box/kelch-repeat protein At1g67480 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAG8]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.