Factsheet for TraesCS3B01G481500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

mitochondrion 3
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G446400.1	Wheat	cytosol, plastid	95.31	95.06
TraesCS3D01G439000.1	Wheat	cytosol	94.53	94.53
HORVU3Hr1G096780.1	Barley	cytosol, plastid	93.75	93.51
Zm00001d016553_P001	Maize	cytosol	77.08	81.32
EES06854	Sorghum	cytosol	79.95	80.16
Os02t0504900-01	Rice	cytosol	79.95	79.74
TraesCS2B01G298300.1	Wheat	mitochondrion	65.89	66.06
GSMUA_Achr8P28270_001	Banana	cytosol	63.28	63.28
GSMUA_Achr3P16120_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	61.98	62.3
KRG97442	Soybean	cytosol, nucleus, peroxisome	59.11	61.35
VIT_01s0010g03320.t01	Wine grape	cytosol	61.2	61.04
KRH42654	Soybean	cytosol	61.2	60.57
KRH31463	Soybean	cytosol	60.68	60.52
GSMUA_Achr6P20750_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	56.77	55.9
CDY12647	Canola	cytosol	50.0	53.04
Bra033998.1-P	Field mustard	cytosol	50.0	53.04
CDX96091	Canola	cytosol	50.78	52.28
Bra004227.1-P	Field mustard	cytosol	50.26	51.74
CDY01812	Canola	cytosol	49.74	51.21
AT1G67480.1	Thale cress	cytosol, mitochondrion	50.0	51.06
CDY64883	Canola	golgi, plastid	50.26	46.96
TraesCS7B01G234000.1	Wheat	cytosol	21.88	25.3
TraesCS6B01G243200.1	Wheat	cytosol	22.92	24.93
TraesCS1B01G154600.1	Wheat	plastid	25.0	21.92
TraesCS4B01G283400.1	Wheat	cytosol	24.48	21.86
TraesCS3B01G611700.1	Wheat	cytosol	23.96	21.55
TraesCS4B01G283500.1	Wheat	cytosol	23.96	21.35
TraesCS6B01G052900.2	Wheat	cytosol	20.57	20.68
TraesCS6B01G227500.1	Wheat	cytosol, peroxisome, plastid	23.44	19.57
TraesCS6B01G209700.1	Wheat	cytosol	21.35	19.39
TraesCS6B01G334300.1	Wheat	cytosol, nucleus, plastid	19.01	17.18
TraesCS2B01G484200.1	Wheat	cytosol	20.05	17.15

Protein Annotations

EnsemblPlants:TraesCS3B01G481500.1	EnsemblPlantsGene:TraesCS3B01G481500	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24412	PANTHER:PTHR24412:SF377	PFAM:PF01344
SMART:SM00612	SUPFAM:SSF117281	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3B:-:728919208..728920573

Molecular Weight (calculated)

42403.1 Da

IEP (calculated)

7.676

GRAVY (calculated)

-0.079

Length

384 amino acids

Sequence
(BLAST)

001: MVTIVGTREQ FVQPQSFLRA TMLLKSPTRQ LSFCFAPQGD CDQYCALIPG LPEDLAKICL ALVPRTHFPV MGGVSKRWMS FLESKELIAV RKEVRKLDEC
101: VYVLTADSRA KTSHWEILGC QGQKNTPLPP MPGPTKAGFG VVVLDGKLIV IAGYAADHGK ECVSDEVYQY DCFLNRWTAL SKMNVARCDF ACAEVNGVIY
201: VTGGFGPSGD SLSSVEVYDP EQNKWTLIGG LRRPRWGCFG CSFEGKMYVM GGRSSFTIGN SRFIDVYDTN SHAWGEFRNG CVMVTAHAVL GEKLFCIEWK
301: NQRSLAIFDP ADNSWQKVPV PLTGSSSTRF SLGTHDGKLL LFSLEEEPGY QTLMYDPAAP KGSEWCTSKL RPSGLCLCTV TIKA

Best Arabidopsis Sequence Match ( AT1G67480.3 )
(BLAST)

001: MQAFALSGKK RIVNHGMCFS KGNLDLGSRL SENFMDDPLI PGLPDDVAKQ CLALVPRARF PSMGSVCKKW RFVVQSKEFI TVRRLAGMLE EWLYVLTMNA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA

Arabidopsis Description

F-box/kelch-repeat protein At1g67480 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAG8]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.