Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G446400.1 | Wheat | cytosol, plastid | 97.14 | 96.88 |
| TraesCS3B01G481500.1 | Wheat | cytosol, plastid | 94.53 | 94.53 |
| HORVU3Hr1G096780.1 | Barley | cytosol, plastid | 93.75 | 93.51 |
| Zm00001d016553_P001 | Maize | cytosol | 77.34 | 81.59 |
| Os02t0504900-01 | Rice | cytosol | 80.99 | 80.78 |
| EES06854 | Sorghum | cytosol | 79.95 | 80.16 |
| TraesCS2D01G279700.1 | Wheat | mitochondrion | 67.71 | 67.89 |
| GSMUA_Achr8P28270_001 | Banana | cytosol | 63.54 | 63.54 |
| VIT_01s0010g03320.t01 | Wine grape | cytosol | 62.5 | 62.34 |
| GSMUA_Achr3P16120_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 61.98 | 62.3 |
| KRG97442 | Soybean | cytosol, nucleus, peroxisome | 59.38 | 61.62 |
| KRH31463 | Soybean | cytosol | 60.94 | 60.78 |
| KRH42654 | Soybean | cytosol | 61.2 | 60.57 |
| GSMUA_Achr6P20750_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 57.03 | 56.15 |
| Bra033998.1-P | Field mustard | cytosol | 50.52 | 53.59 |
| CDY12647 | Canola | cytosol | 50.52 | 53.59 |
| CDX96091 | Canola | cytosol | 51.56 | 53.08 |
| Bra004227.1-P | Field mustard | cytosol | 51.04 | 52.55 |
| CDY01812 | Canola | cytosol | 50.52 | 52.01 |
| AT1G67480.1 | Thale cress | cytosol, mitochondrion | 50.78 | 51.86 |
| CDY64883 | Canola | golgi, plastid | 50.78 | 47.45 |
| TraesCS6D01G195800.1 | Wheat | cytosol | 23.96 | 26.06 |
| TraesCS4D01G282200.1 | Wheat | cytosol | 24.74 | 22.78 |
| TraesCS3D01G540000.1 | Wheat | cytosol | 24.48 | 22.01 |
| TraesCS7D01G005100.1 | Wheat | cytosol | 12.24 | 21.86 |
| TraesCS6D01G167900.1 | Wheat | plastid | 23.44 | 21.28 |
| TraesCS7D01G483900.1 | Wheat | cytosol | 21.09 | 21.15 |
| TraesCS4D01G286700.1 | Wheat | cytosol | 17.97 | 20.91 |
| TraesCS1D01G136700.1 | Wheat | nucleus | 25.26 | 20.77 |
| TraesCS6D01G043400.1 | Wheat | cytosol | 20.57 | 20.68 |
| TraesCS2D01G499800.1 | Wheat | mitochondrion | 21.61 | 20.49 |
| TraesCS7D01G016400.1 | Wheat | cytosol, plastid | 22.14 | 18.64 |
| TraesCS2D01G463000.1 | Wheat | cytosol | 20.31 | 17.45 |
| TraesCS6D01G285100.1 | Wheat | cytosol, nucleus, plastid | 19.27 | 17.41 |
| TraesCS7D01G007100.1 | Wheat | cytosol | 16.41 | 16.94 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G439000.1 | EnsemblPlantsGene:TraesCS3D01G439000 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24412 | PANTHER:PTHR24412:SF377 | PFAM:PF01344 |
| SMART:SM00612 | SUPFAM:SSF117281 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3D:-:549514757..549516124
Molecular Weight (calculated)
42436.0 Da
IEP (calculated)
6.630
GRAVY (calculated)
-0.107
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTIVGTREQ FVQPQTFLRA TMQLKSPRPE LSFCFTPQGD CDQYCALIPG LPEDLAKICL ALVPRTHFPV MGGVSKRWMS FLESKELIAV RKEVQKLDEC
101: VYVLTADAQA KGSHWEVLGC QGQKNTPLPP MPGPTKAGFG VVVLDGKLIV IAGYAADHGK EFVSDEVYQY DCFLNRWTAL SKMNVARCDF ACAEVNGVIY
201: VAGGFGPSGD SLSSVEVYDP EQNKWTLIEG LRRPRWGCFG CSFEGKMYVM GGRSSFTIGN SRYIDVYDTN SNAWGEFRNG CVMVTAHAVL GEKLFCIEWK
301: NQRSLAIFEP ADNSWKKVPV PLTGSSSTRF SLGIHDGKLL LFSLEEEPGY QTLMYDPAAP TGSEWCTSNL RPSGRCLCTV TIKA
101: VYVLTADAQA KGSHWEVLGC QGQKNTPLPP MPGPTKAGFG VVVLDGKLIV IAGYAADHGK EFVSDEVYQY DCFLNRWTAL SKMNVARCDF ACAEVNGVIY
201: VAGGFGPSGD SLSSVEVYDP EQNKWTLIEG LRRPRWGCFG CSFEGKMYVM GGRSSFTIGN SRYIDVYDTN SNAWGEFRNG CVMVTAHAVL GEKLFCIEWK
301: NQRSLAIFEP ADNSWKKVPV PLTGSSSTRF SLGIHDGKLL LFSLEEEPGY QTLMYDPAAP TGSEWCTSNL RPSGRCLCTV TIKA
001: MQAFALSGKK RIVNHGMCFS KGNLDLGSRL SENFMDDPLI PGLPDDVAKQ CLALVPRARF PSMGSVCKKW RFVVQSKEFI TVRRLAGMLE EWLYVLTMNA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA
Arabidopsis Description
F-box/kelch-repeat protein At1g67480 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAG8]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.