CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016553_P001	Maize	cytosol	89.3	93.96
TraesCS3A01G446400.1	Wheat	cytosol, plastid	80.94	80.52
Os02t0504900-01	Rice	cytosol	80.94	80.52
HORVU3Hr1G096780.1	Barley	cytosol, plastid	80.68	80.26
TraesCS3D01G439000.1	Wheat	cytosol	80.16	79.95
TraesCS3B01G481500.1	Wheat	cytosol, plastid	80.16	79.95
OQU81371	Sorghum	mitochondrion	67.1	68.17
GSMUA_Achr8P28270_001	Banana	cytosol	65.01	64.84
GSMUA_Achr3P16120_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	64.23	64.4
VIT_01s0010g03320.t01	Wine grape	cytosol	64.49	64.16
KRG97442	Soybean	cytosol, nucleus, peroxisome	60.57	62.7
KRH42654	Soybean	cytosol	61.62	60.82
KRH31463	Soybean	cytosol	61.1	60.78
GSMUA_Achr6P20750_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	58.75	57.69
Bra033998.1-P	Field mustard	cytosol	53.52	56.63
CDY12647	Canola	cytosol	53.52	56.63
AT1G67480.1	Thale cress	cytosol, mitochondrion	54.05	55.05
Bra004227.1-P	Field mustard	cytosol	53.26	54.69
CDX96091	Canola	cytosol	53.26	54.69
CDY01812	Canola	cytosol	53.0	54.42
CDY64883	Canola	golgi, plastid	53.79	50.12
OQU82118	Sorghum	cytosol	23.24	25.57
EES06149	Sorghum	cytosol	20.89	23.12
EER97991	Sorghum	mitochondrion	24.54	22.71
EER91632	Sorghum	plastid	25.07	21.97
EER95442	Sorghum	mitochondrion	24.8	21.69
KXG29748	Sorghum	plastid	24.54	21.61
KXG27134	Sorghum	cytosol	14.36	20.45
EES05304	Sorghum	cytosol, peroxisome, plastid	24.02	20.04
EER90147	Sorghum	cytosol	20.1	19.59
KXG24326	Sorghum	cytosol	22.98	18.8
KXG30756	Sorghum	cytosol	19.58	17.65
KXG40080	Sorghum	cytosol	19.58	17.52
OQU83795	Sorghum	cytosol	20.37	17.49
OQU91835	Sorghum	cytosol, nucleus, plastid	19.58	16.89
OQU82347	Sorghum	mitochondrion	20.37	16.53

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EntrezGene:8059573	UniProt:C5XSJ9	EnsemblPlants:EES06854	ProteinID:EES06854
ProteinID:EES06854.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031463	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PFAM:PF01344	PANTHER:PTHR24412	PANTHER:PTHR24412:SF377	SMART:SM00612
EnsemblPlantsGene:SORBI_3004G153400	SUPFAM:SSF117281	unigene:Sbi.3681	UniParc:UPI0001A85AF1	RefSeq:XP_002453878.1	:

Description

hypothetical protein

Coordinates

chr4:-:48431071..48432917

Molecular Weight (calculated)

42478.2 Da

IEP (calculated)

7.104

GRAVY (calculated)

-0.124

Length

383 amino acids

Sequence
(BLAST)

001: MLAVSQEHLA HSQTCFRARM QLKPPTRPKL YSGLMPQEEF DSYCDLIPGL PEDLAKICLA LVPRTHFPVM GAVSKRWMSF LESKELIAVR KEVGKLEEWV
101: YVLTPDAGAK GSHWEILECS GQKQSPLPRM PGLTKAGFGV VVIGGKLFII AGYSADHGKD CVSDEVYQYD SCLNRWTVLA KMNVARCDFA CAEVNGVIYV
201: AGGFGPNGES LSSVEVYDLE QNKWTLIEGL RRPRWGCFGC SFEGKLYVMG GRSSFTIGNS RFVDVYNPNN HAWDQVKNGC VMVTAHAVLG EKLFCIEWKN
301: QRSLAIFNPA DNSWQKVPVP LTGSSSTRFS FGVHEDKLLL FPLEEEPGYQ TLMYDPAAPM GSEWCTSKLK PSGSCLCSVT IKA

Best Arabidopsis Sequence Match ( AT1G67480.3 )
(BLAST)

001: MQAFALSGKK RIVNHGMCFS KGNLDLGSRL SENFMDDPLI PGLPDDVAKQ CLALVPRARF PSMGSVCKKW RFVVQSKEFI TVRRLAGMLE EWLYVLTMNA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA

Arabidopsis Description

F-box/kelch-repeat protein At1g67480 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAG8]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.