Factsheet for Bra031360.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30645	Canola	nucleus	88.93	97.31
AT1G22040.1	Thale cress	plastid	79.51	40.84
Bra012304.1-P	Field mustard	cytosol	73.36	38.33
VIT_18s0001g04730.t01	Wine grape	cytosol, plastid	56.56	28.93
GSMUA_Achr2P22090_001	Banana	cytosol	42.62	27.59
KRH53131	Soybean	cytosol	52.46	26.89
KRH55297	Soybean	cytosol	31.56	26.28
KRH18847	Soybean	cytosol	50.82	26.11
KRH16647	Soybean	cytosol, plastid	50.82	26.0
GSMUA_Achr6P04050_001	Banana	cytosol	47.13	25.27
EES05304	Sorghum	cytosol, peroxisome, plastid	45.49	24.18
Os02t0574900-01	Rice	cytosol	45.08	23.91
TraesCS6B01G227500.1	Wheat	cytosol, peroxisome, plastid	44.26	23.48
Zm00001d050862_P001	Maize	cytosol, peroxisome, plastid	43.44	23.25
HORVU6Hr1G052010.1	Barley	cytosol	42.62	22.61
Os10t0363600-01	Rice	cytosol, plastid	42.21	21.68
KXG24326	Sorghum	cytosol	41.39	21.58
Zm00001d049632_P001	Maize	cytosol	41.39	21.09
GSMUA_Achr10P...	Banana	cytosol	43.85	20.58
TraesCS4A01G472100.1	Wheat	cytosol	38.11	20.31
TraesCS7D01G016400.1	Wheat	cytosol, plastid	37.7	20.18
HORVU7Hr1G002140.2	Barley	mitochondrion	39.34	20.13
TraesCS7A01G020100.1	Wheat	cytosol, plastid	37.3	19.96
KRH62415	Soybean	cytosol	19.67	17.39
Bra005497.1-P	Field mustard	cytosol	9.84	16.67
Bra033998.1-P	Field mustard	cytosol	20.9	14.09
Bra030872.1-P	Field mustard	cytosol	22.95	12.87
Bra011908.1-P	Field mustard	mitochondrion	22.95	12.87
Bra004227.1-P	Field mustard	cytosol	19.26	12.6
Bra026073.1-P	Field mustard	cytosol	10.66	12.56
Bra037989.1-P	Field mustard	cytosol, plastid	22.13	12.41
Bra007843.1-P	Field mustard	cytosol	18.85	12.37
Bra003447.1-P	Field mustard	cytosol	17.62	11.98
Bra002471.1-P	Field mustard	cytosol	18.03	11.73
Bra037535.1-P	Field mustard	cytosol	16.39	11.53
Bra026838.1-P	Field mustard	nucleus	18.85	11.3
Bra032358.1-P	Field mustard	mitochondrion, plastid	18.03	11.06
Bra016297.1-P	Field mustard	cytosol	19.26	11.03
Bra001739.1-P	Field mustard	cytosol	15.57	10.98
Bra026575.1-P	Field mustard	nucleus	19.26	10.59
Bra017407.1-P	Field mustard	nucleus, plastid	18.85	10.48
Bra024801.1-P	Field mustard	nucleus	18.85	10.15
Bra010942.1-P	Field mustard	plastid	14.34	10.14
Bra010784.1-P	Field mustard	cytosol	16.39	10.08
Bra003796.1-P	Field mustard	cytosol	17.21	9.84
Bra032983.1-P	Field mustard	cytosol	16.39	9.73
Bra015905.1-P	Field mustard	cytosol	16.39	9.71
Bra030046.1-P	Field mustard	cytosol, plastid	13.93	9.63
Bra025251.1-P	Field mustard	cytosol	16.8	9.47
Bra034944.1-P	Field mustard	cytosol	14.75	8.8
Bra032052.1-P	Field mustard	cytosol	6.15	8.52
Bra008155.1-P	Field mustard	cytosol	9.43	7.74
Bra030045.1-P	Field mustard	cytosol	12.7	6.58

Protein Annotations

EnsemblPlants:Bra031360.1	EnsemblPlants:Bra031360.1-P	EnsemblPlantsGene:Bra031360	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR24414	PANTHER:PTHR24414:SF39
PFAM:PF12937	PFscan:PS50181	SEG:seg	SMART:SM00256	SUPFAM:SSF81383	UniParc:UPI00025475F2
UniProt:M4ERD6	MapMan:35.1	:	:	:	:

Description

AT1G22040 (E=1e-055) | kelch repeat-containing F-box family protein

Coordinates

chrA05:-:15764221..15765636

Molecular Weight (calculated)

27457.6 Da

IEP (calculated)

8.588

GRAVY (calculated)

-0.423

Length

244 amino acids

Sequence
(BLAST)

001: MGSVMSLSCS KRKATSQDEE PSNSSRKRRK LSSSNHEEDY NCRLIPNLPD ELSIQILARL PRISYSSVRL VSRKWRTAVS TSEVYALRKE LGITEEWLYV
101: LTKGQDDKLL WYSLDPVSTR WQRLPPMPVI VYEEESRRSS WNLKVGEVPV YDMTDSESPY LLAGFHGKLH FITRDHNRNV TVLRADVPDV SGSSSSSSFK
201: CVVGSGSLKE KGDAVNKSDT VIWKVIASKD LGAAELVSCQ VIDI

Best Arabidopsis Sequence Match ( AT1G22040.1 )
(BLAST)

001: MGSVMSLSCS KRKATSQDVE CSSESRKRRK ISSENDEEEC CRLIPSLPDE LSIQILARLP RICYSSVRLV SRRWRSAVST SEVYSLRKEL GRTEEWLYVL
101: TKGHEDKLLW YALDPVSTKW QRLPPMPVVV YEEESRKSLS GLWNMITPSF NVGAIVRSFL GRRDSSEQMP FCGCAIGAVD GGLYVIGGLS RSKTVSCVWR
201: FDPILNSWSE VSSMLASRAY SKTGVLNKKL YVVGGVDRGR GGLSPLQSAE VYDPSTDAWS EVPSMPFSKA QVLPNAFLAD LLKPIATGMT CYNGRLCVPQ
301: SLYSWPFFVD VGGEVYDPET NLWVEMPSGM GEGWPARQAG TKLSVVVDGE LYAFDPSSSM ENGKIKVYDQ KEDTWKVVIG EVPVYDLTDS ESPYLLAGFH
401: GKLHFITRDP NHNVTVLRAD VPNIPVSSSS SSSSSVSIPH LKTNAPNKSD TVTWKLIATK DFGAAELVSC QVIDI

Arabidopsis Description

F-box/kelch-repeat protein At1g22040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM55]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.