Factsheet for Bra032983.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34175	Canola	cytosol	98.54	98.54
AT3G27150.1	Thale cress	cytosol	81.02	78.91
Bra025251.1-P	Field mustard	cytosol	82.48	78.29
Bra032052.1-P	Field mustard	cytosol	25.79	60.23
Bra010784.1-P	Field mustard	cytosol	51.58	53.4
Bra034944.1-P	Field mustard	cytosol	52.55	52.81
PGSC0003DMT400021985	Potato	nucleus	51.09	50.36
KRH57678	Soybean	cytosol	47.2	49.24
KRG94518	Soybean	mitochondrion	47.45	48.63
KRH06951	Soybean	cytosol	46.96	47.77
VIT_14s0068g02150.t01	Wine grape	cytosol	52.55	45.28
Bra008155.1-P	Field mustard	cytosol	25.3	35.02
Solyc07g009410.2.1	Tomato	cytosol	36.74	33.86
Bra002471.1-P	Field mustard	cytosol	29.68	32.53
Bra026838.1-P	Field mustard	nucleus	30.66	30.96
Bra017407.1-P	Field mustard	nucleus, plastid	32.6	30.52
Bra026575.1-P	Field mustard	nucleus	32.36	29.95
Bra015905.1-P	Field mustard	cytosol	29.68	29.61
Bra016297.1-P	Field mustard	cytosol	30.66	29.58
Bra024801.1-P	Field mustard	nucleus	31.63	28.7
Bra003796.1-P	Field mustard	cytosol	29.44	28.34
Bra010942.1-P	Field mustard	plastid	16.79	20.0
Bra011908.1-P	Field mustard	mitochondrion	20.68	19.54
Bra033998.1-P	Field mustard	cytosol	17.03	19.34
Bra004227.1-P	Field mustard	cytosol	17.52	19.3
Bra037535.1-P	Field mustard	cytosol	16.06	19.02
Bra030872.1-P	Field mustard	cytosol	19.71	18.62
Bra001739.1-P	Field mustard	cytosol	15.33	18.21
Bra037989.1-P	Field mustard	cytosol, plastid	18.73	17.7
Bra032358.1-P	Field mustard	mitochondrion, plastid	16.79	17.34
Bra003447.1-P	Field mustard	cytosol	14.84	16.99
Bra012304.1-P	Field mustard	cytosol	19.22	16.92
Bra031360.1-P	Field mustard	plastid	9.73	16.39
Bra026073.1-P	Field mustard	cytosol	8.03	15.94
Bra007843.1-P	Field mustard	cytosol	14.36	15.86
Bra030046.1-P	Field mustard	cytosol, plastid	12.65	14.73
Bra030045.1-P	Field mustard	cytosol	16.55	14.44
Bra005497.1-P	Field mustard	cytosol	3.41	9.72

Protein Annotations

EnsemblPlants:Bra032983.1	EnsemblPlants:Bra032983.1-P	EnsemblPlantsGene:Bra032983	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413	PANTHER:PTHR24413:SF160
PFAM:PF01344	SEG:seg	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI00025455F8	UniProt:M4EW00
MapMan:35.1	:	:	:	:	:

Description

AT3G27150 (E=5e-178) | kelch repeat-containing F-box family protein

Coordinates

chrA02:+:22109255..22110490

Molecular Weight (calculated)

46439.6 Da

IEP (calculated)

7.566

GRAVY (calculated)

-0.351

Length

411 amino acids

Sequence
(BLAST)

001: MMTLGDVHTG RFGANSSSSR PRKVQIHGYK IPDLNLDPCL DCDEEETREV VVGKHQDADY VQNVPQLAYE LEVEILSRVP RFEYWKLNLL NKRFSRLLKS
101: GEIFKVRRDR GVVEPSVFML SNGDTRWTMF DKDFEKFQKV PELPSDMCFF RGDKESLCAG THLIVTGKEE KSIALWRYEV ETSKWFKGPA MITPRILFAS
201: ATCGTVVFVA GGLDASLEVV SKAEKYDSET KTWTRLNAMH KRRKFCSGCY LRGKFYVIGG RDERDQNLTC GERYDEGTDT WELIPDILKD MSFSSVQSPP
301: LIAVVNGDLY SLETSANELR VYDTNANVWK RLGDVPVRAK SNGGWGVAFK SLGDKLLVIG ASSGPSRTET MSVYTCSPSA DPKEKLVWEE SKRCCGVRLS
401: HFILNCCVMI A

Best Arabidopsis Sequence Match ( AT3G27150.2 )
(BLAST)

001: MLTLGEDQIG RIGASSSWSR SKKLRVHRYE IPDLNVEPSL DWDGEETGEA TKALSSTCLK PKDADYCLLN VPQLVYELEV EILARVPRFE YWKLKLLNKG
101: FSRLLKSDEI FKVRRERGVV EPSVFMLSSG DTCWTMFDKG FGNCQKLPEL PSDICFLHGD KESLCAGTHL IVTGKEEKSI ALWRYELETS KWFKGPAMIT
201: PRILFASATC GTVVFVAGGL KIEGNGTMEV VDSVEKYDSK TKTWTLLRGM HKRRKFCSGC YLRGKFYVLG GRDENGQNLT CGESYDEKTN TWELIPDILK
301: DMSFSSVQSP PLIAVVGDDL YSLETSANEL RVYDANANSW KKLGDVPVRA KSNGGWGVAF KSLGDKLLVI GASAGPSRAE TMSVYTSRPS ANPANKLYWE
401: ESKRCCGVRF NHFILNCCVM IA

Arabidopsis Description

F-box/kelch-repeat protein At3g27150 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.