Factsheet for Bra025251.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13683	Canola	cytosol	98.15	98.15
Bra032983.1-P	Field mustard	cytosol	78.29	82.48
AT3G27150.1	Thale cress	cytosol	75.06	77.01
Bra032052.1-P	Field mustard	cytosol	24.48	60.23
Bra034944.1-P	Field mustard	cytosol	50.81	53.79
Bra010784.1-P	Field mustard	cytosol	46.42	50.63
KRG94518	Soybean	mitochondrion	45.27	48.88
KRH06951	Soybean	cytosol	45.27	48.51
KRH57678	Soybean	cytosol	43.65	47.97
PGSC0003DMT400021985	Potato	nucleus	45.5	47.24
VIT_14s0068g02150.t01	Wine grape	cytosol	49.65	45.07
Bra008155.1-P	Field mustard	cytosol	23.79	34.68
Bra002471.1-P	Field mustard	cytosol	28.18	32.53
Solyc07g009410.2.1	Tomato	cytosol	32.79	31.84
Bra026838.1-P	Field mustard	nucleus	29.1	30.96
Bra026575.1-P	Field mustard	nucleus	31.18	30.41
Bra017407.1-P	Field mustard	nucleus, plastid	30.72	30.3
Bra015905.1-P	Field mustard	cytosol	28.64	30.1
Bra016297.1-P	Field mustard	cytosol	29.1	29.58
Bra003796.1-P	Field mustard	cytosol	29.1	29.51
Bra024801.1-P	Field mustard	nucleus	30.48	29.14
Bra011908.1-P	Field mustard	mitochondrion	19.4	19.31
Bra037535.1-P	Field mustard	cytosol	14.78	18.44
Bra030872.1-P	Field mustard	cytosol	18.48	18.39
Bra010942.1-P	Field mustard	plastid	14.55	18.26
Bra001739.1-P	Field mustard	cytosol	14.55	18.21
Bra032358.1-P	Field mustard	mitochondrion, plastid	16.63	18.09
Bra037989.1-P	Field mustard	cytosol, plastid	18.01	17.93
Bra033998.1-P	Field mustard	cytosol	14.55	17.4
Bra004227.1-P	Field mustard	cytosol	14.78	17.16
Bra012304.1-P	Field mustard	cytosol	18.48	17.13
Bra026073.1-P	Field mustard	cytosol	8.08	16.91
Bra031360.1-P	Field mustard	plastid	9.47	16.8
Bra003447.1-P	Field mustard	cytosol	13.86	16.71
Bra007843.1-P	Field mustard	cytosol	13.86	16.13
Bra030046.1-P	Field mustard	cytosol, plastid	12.01	14.73
Bra030045.1-P	Field mustard	cytosol	15.01	13.8
Bra005497.1-P	Field mustard	cytosol	4.16	12.5

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EnsemblPlantsGene:Bra025251	EnsemblPlants:Bra025251.1	EnsemblPlants:Bra025251.1-P	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	UniProt:M4E8Z5	PFscan:PS50181	PANTHER:PTHR24413	PANTHER:PTHR24413:SF160	SUPFAM:SSF117281
SUPFAM:SSF81383	UniParc:UPI000253F614	SEG:seg	:	:	:

Description

AT3G27150 (E=3e-182) | kelch repeat-containing F-box family protein

Coordinates

chrA06:+:22573639..22574940

Molecular Weight (calculated)

49063.5 Da

IEP (calculated)

6.765

GRAVY (calculated)

-0.438

Length

433 amino acids

Sequence
(BLAST)

001: MSKAYVVAEG MDYYQEMLTL GQDHTGRIRA SSSRSRPRKV RIREYKIPDL NADPCLDMDE EDTGEVVVFR PQDADYSLNV PQLPYELEVE ILARLPRFEY
101: WKLKFLNKRF SRLLKEGKIF KVRRDRGVVE PSVFMRSHGD TKWTMFDKNF ENYQEVPELP LPSDSSFFLG DKESLCAGTH LIVTGNEGES IALWRYELET
201: SKWFKGPAMI TPRILFASAT CGSVAFVAGG LKMYGDTSKE VVNEAEKYDS GTKTWTRLRG MHKRRQFCSG CFLRGKFHVL GGKDENDKNL TCGERYDEGT
301: DTWELIPDIL KDTSFSSIQS PPLLAVVNEN LYSLETSANE LRVYDTNANA WKKLGDVPVR AKSNGGWGVA FRSLGDKLLV IGESVGPSRT ETMSVYTCRP
401: SANPEEKLLW EESKGCCGVK LSHFILNCCV MIA

Best Arabidopsis Sequence Match ( AT3G27150.2 )
(BLAST)

001: MLTLGEDQIG RIGASSSWSR SKKLRVHRYE IPDLNVEPSL DWDGEETGEA TKALSSTCLK PKDADYCLLN VPQLVYELEV EILARVPRFE YWKLKLLNKG
101: FSRLLKSDEI FKVRRERGVV EPSVFMLSSG DTCWTMFDKG FGNCQKLPEL PSDICFLHGD KESLCAGTHL IVTGKEEKSI ALWRYELETS KWFKGPAMIT
201: PRILFASATC GTVVFVAGGL KIEGNGTMEV VDSVEKYDSK TKTWTLLRGM HKRRKFCSGC YLRGKFYVLG GRDENGQNLT CGESYDEKTN TWELIPDILK
301: DMSFSSVQSP PLIAVVGDDL YSLETSANEL RVYDANANSW KKLGDVPVRA KSNGGWGVAF KSLGDKLLVI GASAGPSRAE TMSVYTSRPS ANPANKLYWE
401: ESKRCCGVRF NHFILNCCVM IA

Arabidopsis Description

F-box/kelch-repeat protein At3g27150 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.