CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62415	Soybean	cytosol	52.73	90.94
KRH18847	Soybean	cytosol	77.94	78.11
KRH16647	Soybean	cytosol, plastid	77.31	77.15
VIT_18s0001g04730.t01	Wine grape	cytosol, plastid	76.26	76.1
AT1G22040.1	Thale cress	plastid	63.87	64.0
CDY01300	Canola	cytosol	29.62	62.95
CDY00415	Canola	mitochondrion	27.94	62.15
KRH72270	Soybean	cytosol	17.02	61.83
GSMUA_Achr6P04050_001	Banana	cytosol	58.4	61.1
KRH42190	Soybean	cytosol, plastid	60.71	60.08
KRH55297	Soybean	cytosol	36.76	59.73
KRH58301	Soybean	cytosol	60.29	59.67
Bra012304.1-P	Field mustard	cytosol	56.3	57.39
EES05304	Sorghum	cytosol, peroxisome, plastid	54.83	56.86
Zm00001d050862_P001	Maize	cytosol, peroxisome, plastid	53.99	56.36
Os10t0363600-01	Rice	cytosol, plastid	56.09	56.21
KXG24326	Sorghum	cytosol	55.25	56.2
CDY30645	Canola	nucleus	26.26	56.05
TraesCS6B01G227500.1	Wheat	cytosol, peroxisome, plastid	53.78	55.65
Os02t0574900-01	Rice	cytosol	53.15	55.0
HORVU6Hr1G052010.1	Barley	cytosol	53.15	55.0
TraesCS7D01G016400.1	Wheat	cytosol, plastid	52.52	54.82
TraesCS7A01G020100.1	Wheat	cytosol, plastid	52.52	54.82
CDY04697	Canola	cytosol	25.63	54.71
TraesCS4A01G472100.1	Wheat	cytosol	51.47	53.49
Bra031360.1-P	Field mustard	plastid	26.89	52.46
HORVU7Hr1G002140.2	Barley	mitochondrion	52.31	52.2
Zm00001d049632_P001	Maize	cytosol	52.1	51.77
GSMUA_Achr10P...	Banana	cytosol	56.51	51.73
CDY01301	Canola	cytosol	17.02	51.59
GSMUA_Achr2P22090_001	Banana	cytosol	32.14	40.58
KRH11716	Soybean	cytosol, golgi, plastid	21.22	27.15
KRG93237	Soybean	cytosol	23.74	26.4
KRH56558	Soybean	cytosol	23.74	26.4
KRH67237	Soybean	cytosol	18.91	26.09
KRG95556	Soybean	cytosol	18.7	25.8
KRH32035	Soybean	cytosol	18.07	25.0
KRH42810	Soybean	cytosol	22.9	24.94
KRH58897	Soybean	cytosol	22.9	24.94
KRH11179	Soybean	mitochondrion, plastid	21.22	24.94
KRH31463	Soybean	cytosol	20.17	24.94
KRG93186	Soybean	cytosol	20.8	24.87
KRH71403	Soybean	cytosol	17.86	24.71
KRH21075	Soybean	mitochondrion	21.01	24.69
KRG97442	Soybean	cytosol, nucleus, peroxisome	19.12	24.59
KRH36711	Soybean	cytosol	20.59	24.32
KRH48156	Soybean	cytosol	18.49	24.31
KRH48153	Soybean	cytosol	18.49	24.31
KRH26429	Soybean	cytosol	18.49	24.18
KRH61941	Soybean	plastid	17.65	23.93
KRH48154	Soybean	cytosol	18.28	23.64
KRH42654	Soybean	cytosol	19.12	23.45
KRH22905	Soybean	cytosol	18.49	22.62
KRH52601	Soybean	extracellular, golgi	18.49	22.06
KRH65052	Soybean	cytosol	14.71	21.88
KRH12864	Soybean	cytosol, plasma membrane	14.92	21.85
KRH56929	Soybean	cytosol	18.49	21.62
KRH24879	Soybean	cytosol	17.86	21.41
KRH65051	Soybean	cytosol	14.71	21.34
KRG94518	Soybean	mitochondrion	17.86	21.2
KRH57678	Soybean	cytosol	17.44	21.07
KRH54527	Soybean	cytosol	19.33	20.86
KRH06951	Soybean	cytosol	17.65	20.79
KRH63378	Soybean	cytosol	19.12	20.63
KRH03453	Soybean	cytosol	17.65	20.59
KRH29930	Soybean	cytosol	14.5	19.88
KRH74828	Soybean	cytosol	18.49	16.39
KRH70694	Soybean	cytosol	18.28	16.14
KRH45883	Soybean	cytosol	18.28	16.14
KRG99114	Soybean	cytosol	17.86	15.77

Protein Annotations

EntrezGene:100806691	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02003451	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_06G106800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1KA24	InterPro:IPR001810
InterPro:IPR015915	ProteinID:KRH53130.1	EnsemblPlants:KRH53131	ProteinID:KRH53131	ProteinID:KRH53131.1	InterPro:Kelch-typ_b-propeller
InterPro:Kelch_1	PFAM:PF00646	PFAM:PF01344	PFscan:PS50181	PANTHER:PTHR24414	PANTHER:PTHR24414:SF39
SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI00023395B6	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:8590160..8593097

Molecular Weight (calculated)

52813.2 Da

IEP (calculated)

5.099

GRAVY (calculated)

-0.162

Length

476 amino acids

Sequence
(BLAST)

001: MGAFFSVAST KPDQRECSEI SPNEACKRQR MSPTVDEENP RLIPNLPDEL SLQIIARLPR ICYFNVRLVS KKWKSTIMSS ELYKLRKELG TTEEWLYLLV
101: KVGENNLLWY ALDPRSKIWQ RMPNMPNFVN KEESKKGSSR LWMWNMVEGI RIAEVIRGFL GQKDAFDEMP FCGCAIGAVD GCVYVLGGFS KASTMRCVWR
201: FDPIQNTWSK VTSMSAGRAY CKTGILNNKL YVVGGVSQGQ AGLVPLQSAE VFDPSTDTWS HVPSMPFSRA QVLPSAFLAD MLKPIATGLT SYMGRLCVPQ
301: SLYSWPFFVD VGGEIYDPET NSWIEMPAGM GDGWPARQAG TKLSVVVDGE LYAFDPSNSM DSGRIKVYDQ GEDAWKVVIG KVPIYDSADS ESPYLLAGFH
401: GKLHVITKDA NHDIAVLQAG LRDNLDSSPS LSTLSQSTLQ ESPELAAESD AAVVWRVVAS RDFGQAELVS CQVIDI

Best Arabidopsis Sequence Match ( AT1G22040.1 )
(BLAST)

001: MGSVMSLSCS KRKATSQDVE CSSESRKRRK ISSENDEEEC CRLIPSLPDE LSIQILARLP RICYSSVRLV SRRWRSAVST SEVYSLRKEL GRTEEWLYVL
101: TKGHEDKLLW YALDPVSTKW QRLPPMPVVV YEEESRKSLS GLWNMITPSF NVGAIVRSFL GRRDSSEQMP FCGCAIGAVD GGLYVIGGLS RSKTVSCVWR
201: FDPILNSWSE VSSMLASRAY SKTGVLNKKL YVVGGVDRGR GGLSPLQSAE VYDPSTDAWS EVPSMPFSKA QVLPNAFLAD LLKPIATGMT CYNGRLCVPQ
301: SLYSWPFFVD VGGEVYDPET NLWVEMPSGM GEGWPARQAG TKLSVVVDGE LYAFDPSSSM ENGKIKVYDQ KEDTWKVVIG EVPVYDLTDS ESPYLLAGFH
401: GKLHFITRDP NHNVTVLRAD VPNIPVSSSS SSSSSVSIPH LKTNAPNKSD TVTWKLIATK DFGAAELVSC QVIDI

Arabidopsis Description

F-box/kelch-repeat protein At1g22040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM55]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.