CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22905	Soybean	cytosol	97.25	91.0
Solyc11g069320.1.1	Tomato	plastid	48.08	80.28
VIT_06s0004g02980.t01	Wine grape	cytosol	77.2	77.2
KRH29930	Soybean	cytosol	73.08	76.66
KRH24879	Soybean	cytosol	82.14	75.31
KRH12864	Soybean	cytosol, plasma membrane	62.36	69.85
PGSC0003DMT400020936	Potato	cytosol	73.08	68.56
Bra002471.1-P	Field mustard	cytosol	68.68	66.67
CDY31534	Canola	cytosol	68.68	66.67
AT5G60570.2	Thale cress	cytosol	71.7	66.41
CDX80156	Canola	cytosol	68.41	65.7
KXG27134	Sorghum	cytosol	47.8	64.68
GSMUA_Achr3P23350_001	Banana	cytosol, extracellular	57.69	52.11
GSMUA_Achr9P30470_001	Banana	cytosol	55.49	51.66
TraesCS2D01G463000.1	Wheat	cytosol	61.54	50.11
TraesCS2B01G484200.1	Wheat	cytosol	61.54	49.89
TraesCS2A01G462600.1	Wheat	cytosol	61.54	49.89
HORVU2Hr1G103880.2	Barley	cytosol	60.99	49.78
Zm00001d026321_P001	Maize	cytosol	60.44	49.11
Os04t0619300-01	Rice	cytosol, extracellular	62.91	48.11
OQU82347	Sorghum	mitochondrion	61.54	47.46
Zm00001d002284_P003	Maize	mitochondrion	62.09	46.31
GSMUA_Achr11P...	Banana	cytosol	53.02	43.86
Zm00001d007538_P001	Maize	cytosol	34.34	42.09
KRH63378	Soybean	cytosol	49.45	40.82
KRH54527	Soybean	cytosol	49.18	40.59
KRH03453	Soybean	cytosol	45.33	40.44
KRH56929	Soybean	cytosol	42.03	37.59
KRG94518	Soybean	mitochondrion	37.91	34.41
KRH06951	Soybean	cytosol	37.64	33.91
KRH74828	Soybean	cytosol	49.73	33.71
KRH70694	Soybean	cytosol	49.73	33.58
KRH45883	Soybean	cytosol	49.45	33.4
KRG99114	Soybean	cytosol	49.18	33.21
KRH57678	Soybean	cytosol	34.34	31.73
Zm00001d019862_P001	Maize	cytosol	59.34	31.58
KRH11716	Soybean	cytosol, golgi, plastid	23.35	22.85
KRH67237	Soybean	cytosol	20.6	21.74
KRG95556	Soybean	cytosol	20.6	21.74
KRH71403	Soybean	cytosol	20.33	21.51
KRH32035	Soybean	cytosol	20.33	21.51
KRG97442	Soybean	cytosol, nucleus, peroxisome	21.7	21.35
KRH31463	Soybean	cytosol	22.53	21.3
KRH36711	Soybean	cytosol	22.8	20.6
KRG93237	Soybean	cytosol	24.18	20.56
KRH56558	Soybean	cytosol	23.9	20.33
KRH48156	Soybean	cytosol	20.05	20.17
KRH58897	Soybean	cytosol	24.18	20.14
KRH42810	Soybean	cytosol	24.18	20.14
KRH42654	Soybean	cytosol	21.43	20.1
KRH11179	Soybean	mitochondrion, plastid	22.25	20.0
KRH48153	Soybean	cytosol	19.51	19.61
KRH62415	Soybean	cytosol	14.84	19.57
KRH48154	Soybean	cytosol	19.78	19.57
KRH21075	Soybean	mitochondrion	21.7	19.51
KRH42190	Soybean	cytosol, plastid	25.0	18.92
KRG93186	Soybean	cytosol	20.6	18.84
KRH65052	Soybean	cytosol	16.48	18.75
KRH53131	Soybean	cytosol	24.18	18.49
KRH18847	Soybean	cytosol	23.9	18.32
KRH58301	Soybean	cytosol	24.18	18.3
KRH72270	Soybean	cytosol	6.32	17.56
KRH16647	Soybean	cytosol, plastid	22.8	17.4
KRH65051	Soybean	cytosol	15.38	17.07
KRH61941	Soybean	plastid	15.93	16.52
KRH52601	Soybean	extracellular, golgi	17.03	15.54
KRH55297	Soybean	cytosol	9.62	11.95

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02007714	InterPro:F-box-like_dom_sf	EnsemblPlantsGene:GLYMA_12G173500	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019005
GO:GO:0019538	GO:GO:0030162	GO:GO:0031625	GO:GO:0042787	GO:GO:0043161	UniProt:I1LTJ0
InterPro:IPR015915	EnsemblPlants:KRH26429	ProteinID:KRH26429	ProteinID:KRH26429.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
PFAM:PF01344	PANTHER:PTHR24413	PANTHER:PTHR24413:SF169	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383
UniParc:UPI000233D46C	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:33027485..33029939

Molecular Weight (calculated)

40124.3 Da

IEP (calculated)

6.631

GRAVY (calculated)

-0.074

Length

364 amino acids

Sequence
(BLAST)

001: MNRGEGANDG FSGPGPNDSL LPGLIDDVAL NCLAWVSGSD YAALSCINKR FNKLINSGYL YGLRKQLGAV EHLVYMVCDP RGWVAFDPKI NRWMSLPKIP
101: CDECFNHADK ESLAVGCELL VFGRELMEFA IWKYSMICRG WVKCQEMNQP RCLFGSSSLG SIAIVAGGSD KYGNVLKSAE LYDSSTGMWE LLPNMHTSRR
201: LCSGFFMDGK FYVIGGMSST TVSLSCGEEY DLKTRSWRKI EGMYPYVNVG VQAPPLVAVV DNQLYAVEHL TNMVKKYDKE KNTWNELGRL PVRADSSNGW
301: GLAFKVCGEQ LLVVGGQRGP EGESIVLSSW CPKSGISNGT IDWQVLGVKE HVGVFVYNCA VMGC

Best Arabidopsis Sequence Match ( AT5G60570.2 )
(BLAST)

001: MAAEEHSNKR REVSASASAS ASASVVVNLR VGEEDNDGHR LRLGSSDSVL PGLIDDVALN CLAWVPRSDY PSLSCVNKKY NKLINSGHLF ALRKELGIVE
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC

Arabidopsis Description

F-box/kelch-repeat protein At5g60570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.