CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29930	Soybean	cytosol	81.61	93.37
KRH12864	Soybean	cytosol, plasma membrane	68.26	83.38
KRH26429	Soybean	cytosol	75.31	82.14
KRH22905	Soybean	cytosol	79.85	81.49
Solyc11g069320.1.1	Tomato	plastid	43.83	79.82
VIT_06s0004g02980.t01	Wine grape	cytosol	70.78	77.2
Bra002471.1-P	Field mustard	cytosol	65.24	69.07
CDY31534	Canola	cytosol	65.24	69.07
PGSC0003DMT400020936	Potato	cytosol	67.25	68.81
CDX80156	Canola	cytosol	64.99	68.07
AT5G60570.2	Thale cress	cytosol	66.0	66.67
KXG27134	Sorghum	cytosol	42.82	63.2
GSMUA_Achr3P23350_001	Banana	cytosol, extracellular	53.65	52.85
GSMUA_Achr9P30470_001	Banana	cytosol	50.88	51.66
TraesCS2D01G463000.1	Wheat	cytosol	55.92	49.66
HORVU2Hr1G103880.2	Barley	cytosol	55.67	49.55
TraesCS2B01G484200.1	Wheat	cytosol	55.92	49.44
TraesCS2A01G462600.1	Wheat	cytosol	55.92	49.44
Zm00001d026321_P001	Maize	cytosol	55.42	49.11
Os04t0619300-01	Rice	cytosol, extracellular	57.68	48.11
OQU82347	Sorghum	mitochondrion	56.68	47.67
Zm00001d002284_P003	Maize	mitochondrion	57.18	46.52
GSMUA_Achr11P...	Banana	cytosol	49.12	44.32
KRH03453	Soybean	cytosol	43.07	41.91
Zm00001d007538_P001	Maize	cytosol	31.23	41.75
KRH63378	Soybean	cytosol	46.1	41.5
KRH54527	Soybean	cytosol	45.84	41.27
KRH56929	Soybean	cytosol	40.3	39.31
KRH70694	Soybean	cytosol	47.61	35.06
KRG99114	Soybean	cytosol	47.61	35.06
KRH74828	Soybean	cytosol	47.36	35.01
KRH45883	Soybean	cytosol	47.36	34.88
KRG94518	Soybean	mitochondrion	34.01	33.67
KRH06951	Soybean	cytosol	33.75	33.17
Zm00001d019862_P001	Maize	cytosol	55.67	32.31
KRH57678	Soybean	cytosol	30.73	30.96
KRH11716	Soybean	cytosol, golgi, plastid	20.15	21.51
KRH67237	Soybean	cytosol	18.39	21.16
KRG97442	Soybean	cytosol, nucleus, peroxisome	19.65	21.08
KRG95556	Soybean	cytosol	18.14	20.87
KRH31463	Soybean	cytosol	20.15	20.78
KRH32035	Soybean	cytosol	17.88	20.64
KRH71403	Soybean	cytosol	17.88	20.64
KRH42654	Soybean	cytosol	20.15	20.62
KRG93237	Soybean	cytosol	22.17	20.56
KRH56558	Soybean	cytosol	21.91	20.33
KRH11179	Soybean	mitochondrion, plastid	20.65	20.25
KRH48156	Soybean	cytosol	18.39	20.17
KRH21075	Soybean	mitochondrion	20.15	19.75
KRH58897	Soybean	cytosol	21.66	19.68
KRH42810	Soybean	cytosol	21.66	19.68
KRG93186	Soybean	cytosol	19.65	19.6
KRH48154	Soybean	cytosol	18.14	19.57
KRH48153	Soybean	cytosol	17.63	19.34
KRH36711	Soybean	cytosol	19.4	19.11
KRH65052	Soybean	cytosol	15.37	19.06
KRH62415	Soybean	cytosol	13.1	18.84
KRH42190	Soybean	cytosol, plastid	22.42	18.5
KRH18847	Soybean	cytosol	21.91	18.32
KRH58301	Soybean	cytosol	21.66	17.88
KRH53131	Soybean	cytosol	21.41	17.86
KRH16647	Soybean	cytosol, plastid	20.91	17.4
KRH61941	Soybean	plastid	14.86	16.81
KRH72270	Soybean	cytosol	5.54	16.79
KRH65051	Soybean	cytosol	13.35	16.16
KRH52601	Soybean	extracellular, golgi	15.62	15.54
KRH55297	Soybean	cytosol	8.56	11.6

Protein Annotations

EntrezGene:100778680	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02007190	EnsemblPlantsGene:GLYMA_12G068300	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019005
GO:GO:0019538	GO:GO:0030162	GO:GO:0031625	GO:GO:0042787	GO:GO:0043161	UniProt:I1LQW4
InterPro:IPR015915	EnsemblPlants:KRH24879	ProteinID:KRH24879	ProteinID:KRH24879.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
PFAM:PF01344	PANTHER:PTHR24413	PANTHER:PTHR24413:SF169	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI000233C172

Description

hypothetical protein

Coordinates

chr12:-:5026726..5029178

Molecular Weight (calculated)

44608.5 Da

IEP (calculated)

6.647

GRAVY (calculated)

-0.243

Length

397 amino acids

Sequence
(BLAST)

001: MTKRIRKDCS LQEDVEKVNN SFVELDTREG MNDGFPRAGP NDSLLPGLFD DVALNCLAWA SRSDYASLAC INKRYNLLIR SGYLSELRKK LGIVELEHLV
101: YLVCDPRGWE VFDPKKNRWI TLPKIPCDEC FNHADKESLA VGSEMLVFGR ELMDFAIWKY SLISCNWVKC KEMNRPRCLF GSGNLGSIAI VAGGSDKYGN
201: VLESAELYDS NSGTWELLPN MHTPRRLCSG FFMDGKFYVI GGMSSPIVSL TCGEEYDLKT RNWRKIEGMY PYVNGAAQAP PLVAVVDNQL YAVEHLTNMV
301: NKYDKERNTW SELGRLPVRA DSSNGWGLAF KACGEKLLVV SGQRGPEGEA VVLNSWRPRT GFRNGTIDWK VLGVKEHVGV FVYNCAVMGW SGEMLLD

Best Arabidopsis Sequence Match ( AT5G60570.2 )
(BLAST)

001: MAAEEHSNKR REVSASASAS ASASVVVNLR VGEEDNDGHR LRLGSSDSVL PGLIDDVALN CLAWVPRSDY PSLSCVNKKY NKLINSGHLF ALRKELGIVE
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC

Arabidopsis Description

F-box/kelch-repeat protein At5g60570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.